FFCP PHASE2:Hg19::chr1:203148495..203148505,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1116 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:1932 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=1932 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 22:06, 19 September 2015
| Short description: | p13@CHI3L1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_CHI3L1_5end |
| Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
| Association with transcript: | 105bp_to_uc001gzl.3_5end |
| EntrezGene: | CHI3L1 |
| HGNC: | 1932 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@CHI3L1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| GAG secreting cell | 4.10e-49 | 9 |
| carbohydrate secreting cell | 4.10e-49 | 9 |
| chondroblast | 8.66e-38 | 6 |
| chondrocyte | 8.66e-38 | 6 |
| stromal cell | 3.21e-31 | 28 |
| extracellular matrix secreting cell | 3.05e-29 | 15 |
| fibrocyte | 3.59e-28 | 3 |
| tendon cell | 3.59e-28 | 3 |
| macrophage | 1.27e-24 | 6 |
| secretory cell | 3.23e-15 | 36 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| dense regular connective tissue | 3.59e-28 | 3 |
| tendon | 3.59e-28 | 3 |
| regular connective tissue | 3.59e-28 | 3 |
| stratified squamous epithelium | 1.70e-13 | 3 |
| layer of synovial tissue | 1.70e-13 | 3 |
| synovial joint | 1.70e-13 | 3 |
| synovial membrane of synovial joint | 1.70e-13 | 3 |
| dura mater | 2.74e-10 | 1 |
| future meninx | 2.74e-10 | 1 |
| ectomeninx | 2.74e-10 | 1 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| pleomorphic carcinoma | 3.61e-10 | 1 |
Showing 1 to 1 of 1 entries
