FFCP PHASE2:Mm9::chr4:133524029..133524041,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:100039489,entrezgene:100042405,entrezgene:100503799,entrezgene:15331,entrezgene:625514,entrezgene:627375,entrezgene...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=100039489,100042405,100503799,15331,625514,627375,671242 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P09602 | ||
|association_with_transcript=-113bp_to_ENSMUST00000102553_5end | |association_with_transcript=-113bp_to_ENSMUST00000102553_5end | ||
|cluster_id=chr4:133524029..133524041,- | |cluster_id=chr4:133524029..133524041,- | ||
Latest revision as of 11:50, 26 September 2015
| Short description: | p12@Hmgn2-ps1, p13@Gm10282, p13@Gm6594, p13@Gm6750, p13@Gm7931, p13@Gm9525, p13@Hmgn2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_12_at_Hmgn2-ps1_5end, CAGE_peak_13_at_Gm10282_5end, CAGE_peak_13_at_Gm6594_5end, CAGE_peak_13_at_Gm6750_5end, CAGE_peak_13_at_Gm7931_5end, CAGE_peak_13_at_Gm9525_5end, CAGE_peak_13_at_Hmgn2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | -113bp_to_ENSMUST00000102553_5end |
| EntrezGene: | 100039489,100042405,100503799,15331,625514,627375,671242 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p12@Hmgn2-ps1p13@Gm10282p13@Gm6594p13@Gm6750p13@Gm7931p13@Gm9525p13@Hmgn2 |
|---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| multi-potent skeletal muscle stem cell | 1.54e-10 | 9 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 7.16e-11 | 32 |
| skeletal muscle tissue | 1.54e-10 | 9 |
| striated muscle tissue | 1.54e-10 | 9 |
| muscle tissue | 1.54e-10 | 9 |
| multilaminar epithelium | 1.54e-10 | 9 |
| epithelial vesicle | 1.54e-10 | 9 |
| musculature | 1.54e-10 | 9 |
| somite | 1.54e-10 | 9 |
| myotome | 1.54e-10 | 9 |
| presomitic mesoderm | 1.54e-10 | 9 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 3.62e-30 | 3 |
| muscle cancer | 3.62e-30 | 3 |
| organ system cancer | 1.79e-15 | 6 |
Showing 1 to 3 of 3 entries
