Swissregulon:FOXA2.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=0.989:3170:FOXA2:forkhead box A2:FOX:NM_021784: | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0048856!anatomical structure development!2.10090664543009e-06!1634;917;655;84628;10495;56124;1482;11281;4209;10242;860;9564;283;10252;10205;4661;1101;2620;1832;131118;152330;579;57626;56125;56243;197;861;50674;22902;81575;7356;4086;9166$GO:0032501!multicellular organismal process!2.10090664543009e-06!145270;1634;655;84628;4222;5624;1421;56124;4009;5225;1482;2651;11281;4209;10242;10172;860;729;3053;722;200959;9564;283;2078;10333;10252;4661;8735;1142;4620;23126;732;1832;131118;152330;579;2160;56125;57626;56243;197;6857;861;50674;948;2986;22902;81575;4286;4086;7356$GO:0009653!anatomical structure morphogenesis!7.4815061646578e-06!1634;917;84628;2620;1101;10495;579;152330;1482;57626;197;861;10242;50674;9564;81575;283;10252;7356;10205;9166$GO:0032502!developmental process!3.25338011017236e-05!1634;917;655;84628;4222;10495;5624;56124;4009;1482;2651;11281;4209;10242;10172;860;729;9564;283;2078;10252;10205;4661;5610;1101;2620;23126;732;1832;131118;152330;579;57626;56125;56243;197;861;50674;22902;81575;4286;4086;7356;9166$GO:0044421!extracellular region part!8.50410116237726e-05!1634;655;84628;7448;4958;1101;732;5624;5225;197;9068;7276;729;114905;722;4583;283;319$GO:0007275!multicellular organismal development!8.93651529547535e-05!1634;655;84628;4222;56124;4009;1482;2651;11281;10242;4209;10172;860;283;2078;10252;4661;1832;23126;131118;152330;579;57626;56125;56243;197;861;50674;22902;4286;81575;7356;4086$GO:0048731!system development!0.000333194493092766!4661;1634;655;84628;1832;131118;56124;579;152330;1482;56125;57626;11281;56243;197;861;4209;860;50674;22902;81575;283;10252;4086;7356$GO:0005615!extracellular space!0.000962357502064652!9068;197;655;7448;7276;729;722;114905;732;4583;5624;283;5225;319$GO:0030054!cell junction!0.00238368308873201!221692;8647;145270;2554;6857;1142;1832;342184;9564;64098;55530;51208$GO:0003700!transcription factor activity!0.00410664161396525!91464;4661;22926;4222;56995;579;4009;10463;9586;4093;1482;11281;440097;861;4209;10172;860;50674;3660;3516;2078;4086$GO:0048869!cellular developmental process!0.00410664161396525!4661;5610;917;655;84628;2620;1832;732;5624;579;152330;1482;57626;11281;861;860;729;50674;22902;9564;81575;4286;283;10252;9166$GO:0030154!cell differentiation!0.00410664161396525!4661;5610;917;655;84628;2620;1832;732;5624;579;152330;1482;57626;11281;861;860;729;50674;22902;9564;81575;4286;283;10252;9166$GO:0048513!organ development!0.00564759424430378!1634;655;1832;131118;579;152330;1482;57626;56243;197;861;4209;860;81575;283;10252;7356;4086$GO:0044424!intracellular part!0.00698241264458111!7366;129685;10569;29995;4222;51569;54843;6787;342184;56995;10495;5567;11069;65243;55530;10402;1559;9586;7881;4093;221692;64783;11281;4209;80017;10172;283;2078;79071;4734;28992;57733;92421;10252;10205;5523;7571;3109;8735;22926;10584;3034;2620;5889;23126;337879;1558;388403;140807;56155;8813;10558;6857;57505;10576;5320;222894;127;1581;9166;5166;91464;55055;55297;622;2744;4009;115950;10463;1482;2651;10592;90075;440097;860;114905;3516;9564;58511;10529;5873;125;4863;10333;23389;120892;4661;4620;8932;1832;131118;64098;54363;579;10150;57626;56243;10499;861;50674;2986;3660;51086;4286;6741;216;4086;11176$GO:0045087!innate immune response!0.00698241264458111!732;10333;8807;729;722$GO:0031325!positive regulation of cellular metabolic process!0.00816067537432155!1482;10499;861;655;22926;50674;283;10333;4086;9586$GO:0009893!positive regulation of metabolic process!0.0134312953990001!1482;10499;861;655;22926;50674;283;10333;4086;9586$GO:0044459!plasma membrane part!0.0147429830623494!8647;145270;3109;2554;917;84628;1142;54843;342184;1832;10495;64098;6554;56124;55530;1179;221692;56125;4012;6857;10242;948;2986;9564;283518;10333;51348;51208$GO:0045944!positive regulation of transcription from RNA polymerase II promoter!0.016346476636005!1482;10499;861;4086;22926;50674$GO:0009611!response to wounding!0.0213582327956942!197;729;3053;948;722;732;5624;10333;8807;2160$GO:0045941!positive regulation of transcription!0.0218739894912324!1482;10499;861;655;22926;50674;4086;9586$GO:0006069!ethanol oxidation!0.0218739894912324!127;125$GO:0006067!ethanol metabolic process!0.0218739894912324!127;125$GO:0045935!positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.0253595499442095!1482;10499;861;655;22926;50674;4086;9586$GO:0045893!positive regulation of transcription, DNA-dependent!0.0263443163258833!1482;10499;861;4086;22926;50674;9586$GO:0005515!protein binding!0.026641615249621!129685;1634;917;29995;655;7448;51569;54843;342184;3697;11069;9586;4093;221692;9068;4209;283;60437;283518;2078;4734;10252;10205;5523;8735;22926;1101;23126;51444;152330;347730;166824;55282;8813;10558;6857;10576;7356;319;51208;9699;5624;56124;1482;10592;81704;860;722;3516;9564;10529;10333;120892;4661;5610;56110;4620;4958;8932;1832;131118;59272;64098;23031;57626;56125;10499;861;7276;948;22902;51086;6741;23086;4086;54829;11176$GO:0016020!membrane!0.0273590887489972!7366;145270;917;84628;83795;344905;54843;342184;10495;6554;11069;65243;55530;10402;1559;7881;221692;60437;10861;283518;79071;10252;51348;10205;3109;22926;2620;1142;57818;732;152330;286006;347730;1179;1558;139411;8813;10558;6857;5320;81575;221981;1581;51208;9166;5166;55297;622;340547;128218;56124;10463;255798;2651;54798;10242;729;54860;9564;200959;5873;10333;8807;8647;120892;8875;2554;56110;151888;1832;131118;59272;2124;64098;2160;4012;56125;948;2986;339967;4086;54829$GO:0000267!cell fraction!0.0273590887489972!8647;7366;2651;3034;948;54843;9564;8908;6554;11069;1581;1558;1559;9166$GO:0017137!Rab GTPase binding!0.0273590887489972!54843;23086;9699$GO:0044464!cell part!0.0273590887489972!7366;129685;29995;84628;83795;344905;51569;11069;55530;1559;9586;7881;4093;221692;11281;283518;4734;5523;7571;3109;8735;3034;2620;1142;5889;23126;57818;337879;152330;286006;347730;1179;139411;56155;10558;57505;10576;5320;222894;81575;8908;221981;9166;51208;55055;128218;115950;1482;10592;90075;860;729;54860;114905;10529;9564;4863;125;10333;8807;8647;8875;56110;4620;8932;59272;131118;64098;2124;579;56125;57626;10499;948;3660;4286;216;4086;54829;145270;10569;917;8470;4222;54843;342184;6787;56995;10495;5567;6554;65243;10402;64783;80017;4209;10172;283;60437;79071;2078;10861;388743;92421;57733;28992;10252;51348;10205;10584;22926;732;51444;1558;388403;140807;8813;6857;127;1581;91464;5166;55297;622;340547;2744;4009;56124;10463;2651;255798;54798;440097;10242;3516;200959;58511;5873;23389;120892;4661;2554;5610;151888;1832;54363;2160;10150;4012;56243;861;50674;2986;339967;51086;6741;11176$GO:0006366!transcription from RNA polymerase II promoter!0.0283595723155845!1482;11281;10499;861;29995;4209;22926;50674;3660;579;4086;9586$GO:0006958!complement activation, classical pathway!0.0283595723155845!732;729;722$GO:0016563!transcription activator activity!0.0285724005622318!1482;10499;861;4209;22926;860;4286;4086$GO:0050789!regulation of biological process!0.0291857941923853!91464;145270;917;29995;655;4222;56995;10495;5624;11069;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10242;10172;860;729;722;3516;10529;9564;283;2078;10333;10252;23389;7571;4661;5610;22926;1101;2620;8932;23126;732;579;152330;10499;197;6857;861;50674;222894;3660;4286;4086;11176;9166$GO:0005579!membrane attack complex!0.0293303663411599!732;729$GO:0000902!cell morphogenesis!0.0293303663411599!57626;917;197;84628;2620;1101;9564;10495;152330;9166$GO:0032989!cellular structure morphogenesis!0.0293303663411599!57626;917;197;84628;2620;1101;9564;10495;152330;9166$GO:0002455!humoral immune response mediated by circulating immunoglobulin!0.0293303663411599!732;729;722$GO:0006350!transcription!0.0307956269820132!91464;29995;655;4222;56995;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10172;860;3516;283;2078;23389;7571;4661;5610;22926;8932;23126;579;10499;861;50674;3660;222894;4286;6741;4086;11176$GO:0002253!activation of immune response!0.0331195569434006!732;9564;729;722$GO:0005513!detection of calcium ion!0.0332896540173144!6857;10242$GO:0048523!negative regulation of cellular process!0.0332896540173144!1482;10499;5610;197;29995;655;860;2620;8932;3516;3660;5624;283;579;152330;4086$GO:0010468!regulation of gene expression!0.0335964930409568!91464;29995;655;4222;56995;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10172;860;3516;283;2078;10333;23389;7571;4661;5610;22926;8932;23126;579;10499;861;50674;3660;222894;4286;4086;11176$GO:0005737!cytoplasm!0.0342502058986988!7366;129685;10569;51569;54843;342184;56995;10495;5567;11069;55530;10402;1559;7881;4093;221692;80017;79071;4734;28992;57733;92421;10252;3109;8735;22926;10584;2620;3034;1558;56155;8813;10558;6857;57505;10576;5320;127;1581;9166;5166;55297;622;2744;10463;2651;10592;114905;9564;58511;125;5873;10333;120892;4620;1832;131118;64098;54363;10150;57626;56243;10499;51086;216;4086$GO:0002460!adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains!0.0363401978507642!732;10333;729;722$GO:0008201!heparin binding!0.0363401978507642!283;7448;3053;2160$GO:0002250!adaptive immune response!0.0363401978507642!732;10333;729;722$GO:0065008!regulation of biological quality!0.0375037201814076!197;10242;1101;3053;948;10529;9564;10495;5624;283;152330;4086;2160;9166$GO:0043231!intracellular membrane-bound organelle!0.0377787377148466!7366;129685;10569;29995;4222;51569;54843;6787;342184;5567;65243;55530;10402;1559;9586;4093;64783;11281;4209;80017;10172;283;79071;2078;28992;7571;3109;22926;5889;23126;1558;388403;8813;10558;6857;57505;5320;222894;1581;9166;91464;5166;55297;622;2744;4009;115950;10463;1482;2651;10592;90075;440097;860;3516;58511;4863;5873;23389;4661;8932;131118;54363;579;10150;10499;861;50674;2986;3660;51086;4286;6741;4086;11176$GO:0043227!membrane-bound organelle!0.0377787377148466!7366;129685;10569;29995;4222;51569;54843;6787;342184;5567;65243;55530;10402;1559;9586;4093;64783;11281;4209;80017;10172;283;79071;2078;28992;7571;3109;22926;5889;23126;1558;388403;8813;10558;6857;57505;5320;222894;1581;9166;91464;5166;55297;622;2744;4009;115950;10463;1482;2651;10592;90075;440097;860;3516;58511;4863;5873;23389;4661;8932;131118;54363;579;10150;10499;861;50674;2986;3660;51086;4286;6741;4086;11176$GO:0002526!acute inflammatory response!0.0380347815800707!732;197;729;722$GO:0016337!cell-cell adhesion!0.0380347815800707!56125;56110;54798;60437;152330;56124;10205;51208$GO:0048518!positive regulation of biological process!0.0380469976622786!1482;10499;197;861;655;22926;50674;729;722;732;9564;283;10333;4086;9586$GO:0043005!neuron projection!0.0389202633102572!57626;6857;5873;152330$GO:0065007!biological regulation!0.0389202633102572!91464;145270;917;29995;655;4222;56995;10495;5624;11069;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10242;10172;860;729;3053;722;3516;10529;9564;283;2078;10333;10252;23389;7571;4661;5610;22926;1101;2620;8932;23126;732;579;152330;2160;10499;197;6857;861;50674;948;222894;3660;4286;4086;11176;9166$GO:0030212!hyaluronan metabolic process!0.0389202633102572!3697;3698$GO:0015125!bile acid transmembrane transporter activity!0.0389202633102572!8647;6554$GO:0045449!regulation of transcription!0.0391444100940074!91464;29995;655;4222;56995;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10172;860;3516;2078;23389;4661;7571;5610;22926;8932;23126;579;10499;861;50674;222894;3660;4286;4086;11176$GO:0006956!complement activation!0.0391444100940074!732;729;722$GO:0002541!activation of plasma proteins during acute inflammatory response!0.0391444100940074!732;729;722$GO:0007156!homophilic cell adhesion!0.0391444100940074!56125;60437;56110;54798;56124;10205$GO:0048519!negative regulation of biological process!0.0391444100940074!1482;10499;5610;197;29995;655;860;2620;8932;3516;3660;5624;283;579;152330;4086$GO:0009887!organ morphogenesis!0.0391444100940074!1482;1634;861;81575;283;579;7356;10252$GO:0005496!steroid binding!0.0391444100940074!216;7356;319;7276$GO:0050778!positive regulation of immune response!0.0391444100940074!732;9564;729;722$GO:0031323!regulation of cellular metabolic process!0.0391444100940074!91464;29995;655;4222;56995;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10172;860;3516;283;2078;10333;23389;7571;4661;5610;22926;8932;23126;579;10499;861;50674;3660;222894;4286;4086;11176$GO:0044237!cellular metabolic process!0.0391444100940074!140458;7366;10569;145270;29995;655;4222;51569;6787;56995;5567;3697;11069;65243;10402;9586;4093;64783;11281;4209;10172;283;2078;79071;4734;57733;388743;5523;7571;22926;3034;5889;23126;732;51444;56155;8813;10558;57505;10576;1360;5320;222894;127;81575;8908;319;1581;91464;5166;5624;2744;4009;115950;5225;10463;1482;2651;10592;270;90075;440097;860;729;722;3516;58511;125;10333;23389;120892;4661;5610;22929;8932;1832;131118;59272;54363;3698;579;23031;2160;4012;10499;861;7276;50674;948;2986;339967;3660;51086;4286;6741;216;4086;1671;11176$GO:0002684!positive regulation of immune system process!0.0391444100940074!732;9564;729;722$GO:0009605!response to external stimulus!0.0391444100940074!197;729;3053;948;722;732;56995;5624;10333;8807;2160$GO:0006351!transcription, DNA-dependent!0.0414446867385405!91464;29995;4222;56995;4009;115950;65243;10463;9586;4093;1482;11281;90075;440097;4209;10172;860;3516;283;2078;23389;4661;7571;5610;22926;8932;579;10499;861;50674;3660;4286;6741;4086;11176$GO:0032774!RNA biosynthetic process!0.0421160514860022!91464;29995;4222;56995;4009;115950;65243;10463;9586;4093;1482;11281;90075;440097;4209;10172;860;3516;283;2078;23389;4661;7571;5610;22926;8932;579;10499;861;50674;3660;4286;6741;4086;11176$GO:0016481!negative regulation of transcription!0.0425296861917141!3516;1482;3660;10499;29995;860;8932$GO:0050794!regulation of cellular process!0.042966828313459!91464;917;29995;655;4222;56995;10495;5624;11069;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10172;860;3516;10529;9564;283;2078;10333;10252;23389;7571;4661;5610;22926;1101;2620;8932;23126;152330;579;10499;197;6857;861;50674;222894;3660;4286;4086;11176;9166$GO:0004022!alcohol dehydrogenase activity!0.0430600887614896!127;125$GO:0019219!regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.0430600887614896!91464;29995;655;4222;56995;4009;115950;65243;10463;9586;4093;1482;64783;11281;90075;440097;4209;10172;860;3516;2078;23389;4661;7571;5610;22926;8932;23126;579;10499;861;50674;222894;3660;4286;4086;11176$GO:0043229!intracellular organelle!0.0441940508759543!7366;129685;10569;29995;4222;51569;54843;6787;342184;5567;65243;55530;10402;1559;9586;4093;64783;11281;4209;80017;10172;283;79071;2078;28992;10205;7571;3109;8735;22926;2620;5889;23126;337879;1558;388403;140807;8813;10558;6857;57505;5320;222894;1581;9166;91464;5166;55055;55297;622;2744;4009;115950;10463;1482;2651;10592;90075;440097;860;3516;58511;10529;4863;5873;10333;23389;4661;4620;8932;1832;131118;64098;54363;579;10150;57626;10499;861;50674;2986;3660;51086;4286;6741;4086;11176$GO:0043226!organelle!0.0443414264653398!7366;129685;10569;29995;4222;51569;54843;6787;342184;5567;65243;55530;10402;1559;9586;4093;64783;11281;4209;80017;10172;283;79071;2078;28992;10205;7571;3109;8735;22926;2620;5889;23126;337879;1558;388403;140807;8813;10558;6857;57505;5320;222894;1581;9166;91464;5166;55055;55297;622;2744;4009;115950;10463;1482;2651;10592;90075;440097;860;3516;58511;10529;4863;5873;10333;23389;4661;4620;8932;1832;131118;64098;54363;579;10150;57626;10499;861;50674;2986;3660;51086;4286;6741;4086;11176$GO:0031324!negative regulation of cellular metabolic process!0.0452480670313605!3516;1482;3660;10499;283;29995;860;8932$GO:0048706!embryonic skeletal development!0.0474856651932112!56243;579$GO:0030968!unfolded protein response!0.0474856651932112!5610;22926$GO:0044425!membrane part!0.0490039833946215!7366;145270;917;84628;83795;344905;54843;342184;10495;6554;55530;10402;1559;7881;221692;60437;10861;283518;79071;51348;10205;3109;22926;1142;732;286006;347730;1179;1558;139411;8813;10558;6857;81575;221981;1581;51208;9166;128218;56124;10463;255798;2651;10242;729;54860;9564;200959;10333;8807;8647;2554;56110;151888;1832;131118;59272;2124;64098;4012;56125;948;2986;339967;4086 | |||
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| |||
|name=FOXA2.p1 | |name=FOXA2.p1 | ||
|weight_matrix=NA:FOXA2.p1;PO:A:C:G:T;01:270.675777:159.532195:100.739701:96.959897;02:354.787629:100.217113:48.583568:124.31926;03:255.282245:82.716674:59.573436:230.335215;04:21.066147:51.667468:9.936212:545.237743;05:358.30921:11.823107:240.538758:17.236495;06:9.159011:20.146516:5.653903:592.948139999999;07:5.492668:27.344612:4.29513:590.77516;08:16.176808:13.465639:96.033118:502.232005;09:366.751437:23.108321:216.584101:21.463711;10:19.34268:250.919734:7.378523:350.266633;11:53.34136:56.12096:18.705682:499.739568;12:16.257562:149.583884:14.640862:447.425262 | |weight_matrix=NA:FOXA2.p1;PO:A:C:G:T;01:270.675777:159.532195:100.739701:96.959897;02:354.787629:100.217113:48.583568:124.31926;03:255.282245:82.716674:59.573436:230.335215;04:21.066147:51.667468:9.936212:545.237743;05:358.30921:11.823107:240.538758:17.236495;06:9.159011:20.146516:5.653903:592.948139999999;07:5.492668:27.344612:4.29513:590.77516;08:16.176808:13.465639:96.033118:502.232005;09:366.751437:23.108321:216.584101:21.463711;10:19.34268:250.919734:7.378523:350.266633;11:53.34136:56.12096:18.705682:499.739568;12:16.257562:149.583884:14.640862:447.425262 | ||
}} | }} |
Revision as of 19:21, 16 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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