FFCP PHASE1:Hg19::chr12:66218255..66218304,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:66218255..66218304,+ to FFCP PHASE1:Hg19::chr12:66218255..66218304,+: NSchange) |
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{{FFCP | {{FFCP | ||
|EntrezGene=8091 | |EntrezGene=8091 | ||
|HGNC=5009 | |HGNC=5009 | ||
|UniProt=Q1M182,Q1M188,Q1M186,F5H6H0,Q1M187,Q1M185,P52926 | |UniProt=Q1M182,Q1M188,Q1M186,F5H6H0,Q1M187,Q1M185,P52926 | ||
|association_with_transcript=15bp_to_ENST00000354636,ENST00000393578,ENST00000425208,ENST00000536545,ENST00000537275,ENST00000537429,NM_003483,NM_003484,uc001sss.1,uc001sst.1,uc001ssu.1,uc001ssv.2,uc001ssw.1,uc001ssx.2,uc010ssv.1_5end | |||
|description=CAGE_peak_3_at_HMGA2_5end | |||
|id=chr12:66218255..66218304,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.21e-29!248;CL:0000055!2.58e-29!180;CL:0000220!4.00e-29!246;CL:0000548!1.10e-23!679;CL:0000004!1.10e-23!679;CL:0000255!1.10e-23!679;CL:0000012!1.45e-23!682;CL:0002371!7.62e-21!591;CL:0000144!3.55e-19!625;CL:0000066!1.99e-17!254;CL:0000680!2.60e-15!57;CL:0000056!2.60e-15!57;CL:0000355!2.60e-15!57;CL:0000183!4.09e-15!59;CL:0000222!5.21e-15!119;CL:0000187!4.08e-14!54;CL:0000393!8.14e-14!60;CL:0000211!8.14e-14!60;CL:0000003!5.73e-13!722;CL:0000057!3.30e-11!75;CL:0000192!1.49e-10!42;CL:0000514!1.49e-10!42;CL:0000359!1.65e-08!32;CL:0002076!3.36e-08!43;CL:0000223!4.59e-08!59;CL:1000449!8.79e-07!16 | |||
|phase1_expression=0.54503513781167,2.78330681058278,0.422863212287913,0,0,0,0,16.4247167090976,0.783556884599516,31.4539438721931,23.0274385430901,11.5773927228991,6.06664049925443,32.1792517696121,11.2675107747491,22.8590549793604,28.3266428171269,24.1002329827833,27.8121695310589,6.1560529038394,10.8120366359454,2.19418305034661,4.57977579409691,8.34933992944594,10.6711243655582,1.60468152070698,1.47781061009902,1.18066171970519,0,0,0,19.3078457140575,43.0724463852898,23.2945026405076,0,0,2.34880351467878,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92355994087075,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,4.02420515822182,2.68511379871414,1.0843174571537,0.50133791063589,1.59331170856906,19.0868627292264,16.058950719987,51.6160101715811,48.5587380443015,55.1602454152832,0,67.0303330458278,29.2919709799699,0,0,0,0,0,0,11.7269820346356,12.9035189265919,12.844198559481,13.5673906061762,28.1064622260637,25.5859779004263,24.24341611827,17.0555061051757,18.4998456597089,7.69857409358742,0.805658634218294,1.52054421143703,0.976248230192678,11.0298924103761,18.6332648012805,28.3973135943374,29.1888184414021,71.3956786264263,16.8648301212472,29.427235446612,24.3658319427442,0,0,25.293455024267,4.47274756525787,18.4880547030286,34.4263870114369,20.078563452417,24.826786753885,14.0169400035577,17.0798393167528,27.6267654227219,21.7847724779836,16.7041233366413,30.8942996884437,4.69208025699287,21.31850920576,16.168178796532,52.4428929074938,27.953119255678,62.0212024289974,60.1264633056076,77.8608862410713,86.9390493486918,21.6403421530187,112.761903292203,11.2625101481584,5.94001428641027,8.15980866619238,12.7422590671324,3.59309070908119,105.715079563154,170.411424065615,44.0531943619851,13.608306247306,9.80760946556863,12.6199969481541,38.2266457249271,13.4542226766646,4.27114777637135,9.11307174986116,26.107925359343,7.31672957592916,3.86460810068444,0.744467425326359,24.9788971717074,2.24105111870757,14.8935926804028,7.27194199274165,3.55621325001386,8.87523981291536,3.42557133973977,14.243089754081,17.0069550783701,29.4565810238101,36.9977928051815,18.1740822133097,16.0361019668997,22.4254309738171,21.1468552231356,28.512256148946,10.2193660541232,1.56449532329816,5.78916844373597,1.38134921352481,10.2160944167035,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0,0,3.69077727312324,43.4749498790682,2.8810180793198,1.47008711385542,0,0,0,4.85609409356116,10.0850519605353,51.6419108998562,33.1445861934049,21.3563331189477,48.2539067575828,212.120127858191,26.064664424826,31.1980435583874,31.7528952455601,42.314597815903,23.8339649298718,6.6408565970094,8.33373922637899,2.09279567458058,0,0,0,0,0,2.81201501960331,11.7587489739202,15.7370357939049,25.6137374930146,40.3981174534407,29.5204662957213,0,0,0,0,0,0.761974731506028,0,0,5.13217338068116,4.62723717164956,0.600686115687835,0,36.3304713278969,5.66748089483264,94.0930207082789,24.6908977097356,3.57656445851882,20.287266061344,9.30783408047047,6.24044621468197,94.9095211027304,161.708010506537,110.831626470697,1.85871391755592,1.62786481617433,8.23240336780769,16.6125453989805,2.13235169245527,31.6780749173372,4.22015127883421,2.61460037580088,0.899756920638513,1.2162378064119,0,0,9.10574450868014,3.44585807502342,212.52898851067,16.9394128801068,73.3550471504869,40.4677776922164,0,0,0,0,5.33598710867173,6.50699269288109,1.54657762555539,4.85797169469611,3.82763250991898,0,0,0,17.0541173489604,52.0177341902064,29.2966225595714,4.15941723061614,4.10386674233472,0.788512075169673,5.03708084468667,8.72743689210385,9.09630016223939,23.7988063972761,52.4738222842995,33.55518867459,57.690720006807,18.0137064865721,9.26487244289311,0,0,0,1.81876542867756,9.98612637062982,11.1884408531982,0.992431231275107,0.920771839728375,1.12264037773229,0.896974044789907,2.04682899626681,1.44768529029247,0,61.8380872148649,25.5688884450903,54.8609402172245,48.8099163432604,30.4471191565093,11.7233666103874,23.6597634957876,15.2854441633588,3.67406234126742,26.5853105289807,4.58935452357984,74.4479361297229,126.151122177031,37.648788920489,36.5348061633152,96.0519822925169,9.09867072567173,13.2673090115682,36.0579579890573,21.5918153766405,27.9074830670168,19.5659011803393,14.5279475635672,14.959368160717,35.148336491382,0.219259876645935,0.522870902049801,56.4190275256056,27.5532302387753,23.7526228104941,0.103041011647722,0.54941678891006,0.990113999047056,43.0699153497129,33.8031327938991,1.6068392984416,48.8187127375216,30.5016261886996,25.3281063298114,98.1396396089858,47.3723279869087,42.489891316869,113.351414463414,4.89676196057055,17.5202010282637,29.020700172131,197.289253516627,9.30651583871059,26.031350760648,40.2959803943219,16.0318572136938,15.4016790088044,11.17842663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| ||
|short_description=p3@HMGA2 | |||
}} | }} |
Revision as of 11:18, 18 April 2012
Short description: | p3@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HMGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000354636, ENST00000393578, ENST00000425208, ENST00000536545, ENST00000537275, ENST00000537429, NM_003483, NM_003484, uc001sss.1, uc001sst.1, uc001ssu.1, uc001ssv.2, uc001ssw.1, uc001ssx.2, uc010ssv.1_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | Q1M182Q1M188Q1M186F5H6H0Q1M187Q1M185P52926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.