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FFCP PHASE1:Mm9::chr5:145529373..145529400,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:145529373..145529400,+
|short_description=p3@Trrap
|description=CAGE_peak_3_at_Trrap_5end
|association_with_transcript=-12bp_to_ENSMUST00000128550_5end
|EntrezGene=100683
|EntrezGene=100683
|HGNC=
|HGNC=
|UniProt=D3YY11
|UniProt=D3YY11
|association_with_transcript=-12bp_to_ENSMUST00000128550_5end
|description=CAGE_peak_3_at_Trrap_5end
|id=chr5:145529373..145529400,+
|ontology_enrichment_disease=
|phase1_expression=5.76535849577258,3.14077866875425,5.0049916332849,6.65421264875026,6.01074875935617,2.85394762250213,2.33612640595526,1.80772652818207,1.54867594366833,1.87251621057595,1.88339765048055,1.59544317990673,4.28001824828014,1.92324885321794,2.6648780945253,4.656931149966,4.19737126876888,3.15462165358238,5.34746291062381,3.39511721438424,2.46625541438102,1.09220046320974,1.56719873483361,2.55987876469451,1.60586496747019,2.29692785646008,2.58457197695445,2.58565479223067,2.66032787238923,3.78045194639896,1.10865255327652,3.17515336729816,6.76571266343027,0,5.19932915552294,3.82339684324532,3.26670970019791,4.18531630736908,2.3440060335714,6.28228492768558,3.52938892818609,3.41522742479223,1.94204141212461,0.881277725829041,0.709638518536602,0.367093504323363,0.782391344348039,3.92445281484804,0.659058548203415,1.55543919259427,1.25987779462826,1.43752564364972,3.35565212115473,1.45072428402269,4.7053131879945,1.28629718017973,2.0057340795713,0,6.47412674750713,7.93486468908049,8.87363964908651,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,0,0.299600110518405,0.768436610643109,8.91730665852908,7.83034442323806,5.04779907243317,3.99911378165325,2.87129103237098,7.10446635446733,8.81778333367775,6.43453150627015,2.20231761998777,1.78762273319263,3.5329502648936,7.91317726381163,5.39777097254217,8.33461392890816,3.07101298901519,2.8138130501584,3.20876320331301,1.47314292736834,3.84403538157578,4.84638559145781,1.74170244666323,2.41828992341714,2.6087803983151,0,0.679971333707751,2.69851595818909,0.649776417447669,2.24013443548668,3.37066608316204,0.511290967734173,0.259786004602869,1.06001872353102,3.66192891419369,1.28326477414318,12.7402619853323,7.11066703153331,0.432982082022428,0.760079596425296,2.02209778005913,2.05530983494308,4.66088190564909,2.22663208597237,1.90833859442749,1.21786191324856,2.30615497256059,0.904335843315735,3.64524992120685,1.63366568728578,2.22475470960936,4.33798070759735,4.42305275974937,3.88240439873782,5.07935492458905,5.81850303762267,1.86391761218122,5.5628351432194,6.91174132484402,5.10914110417183,3.11519323715393,2.39961092397363,1.52484272487678,2.99581278809645,2.28750301409313,4.39790232395025,2.60736480288415,3.06858548796397,2.70124457927428,2.43361894601636,3.1570202793598,2.98576729464223,2.0217820674694,5.47148825304832,3.25301107406759,1.60931473103431,3.06105620669094,4.21973489940002,7.62008790494872,5.25266253167884,4.40398105430725,2.58703370739016,4.74249584452253,4.34943984385984,4.39877810409872,1.53437012699302,3.05851974148158,4.179025998266,1.4404749548556,2.9855140022774,4.91549231119264,2.05878325691772,2.55747149456033,4.76389276831654,5.15957331958412,2.70093092191522,5.20838418287463,4.72234156193769,4.78228049950873,5.11574678450897,3.75582761959467,7.82327793860036,5.10135534731789,6.07419617092652,4.13450928683864,6.14039947186396,3.51280184465681,5.2340503316545,2.73376933133365,4.93942139420565,2.97376904685418,3.70230793328962,4.26576501070468,3.0190767341857,3.99489130098489,4.63872106633688,2.89091456998331,3.99473814836374,3.32170343081158,2.9645811850322,5.27803938480566,4.37704238490532,3.70431765526328,6.29173586057955,2.80979464837102,4.38110801159608,1.89667900953082,2.97046132785295,4.50830942692322,3.25842124552503,2.71533482034676,4.55882829287071,2.52946148497029,2.50937251565324,1.56998727841375,1.35736880313981,1.1858105083486,3.33690211432188,1.76903095601883,4.04751802292737,2.84004169943904,3.61765739628625,1.52775511068852,2.30156909960649,3.08056930872567,3.29473695825698,1.43768206527355,5.58211421502755,2.80833905803104,3.78868316920668,2.51156378930677,0.964887042726734,2.21703828199926,2.08440552947533,5.21487924614483,2.20668611507745,1.40814148973101,3.85264392116176,2.38043640886014,2.34160377429359,3.15270288212382,5.75808193086815,3.34855014180723,2.29408640602033,1.89953480052485,1.73578870297814,1.50791283939272,0.54390568381871,1.96705709207614,3.31124095565679,1.76605648986571,4.10240903072711,2.95082901678016,6.5642441073137,4.73262329124385,1.17131623288992,2.58508077279359,1.43381278771531,2.22798674082394,2.83076530788832,2.02405350837447,2.92255857911312,2.37172666767914,7.06906896127976,3.26462195979018,3.20518086601059,3.74640006513225,3.46437258242324,2.65490276679926,2.6705869977048,3.62788268357701,3.96070667487386,3.54362271456927,2.15204603560749,6.46070732920553,3.99887102425256,3.20847640546249,4.10847785316561,5.27093042874994,2.06271086496374,4.42571487479924,2.70091641046965,3.75140182969988,2.35770738534752,3.19212420556092,2.67553226403106,3.45552943264454,4.56697423671899,2.58138878870081,3.1774810629573,2.8668691747145,2.30840754118072,5.32832608096488,4.58378229453985,4.17803204010978,4.43180429311665,6.41257840585672,2.78137953015765,3.41741761595705,2.06386867963222,2.40752885580625,4.70921142511728,2.7338845544205,3.20289442489132,3.39956859987711,2.09927178485487,4.14599921413271,0,3.16335993581135,2.23651413839534,2.48412283890143,3.97267762427491,2.62035076495413,2.69728692769641,3.63675205191478,1.30877970992015,2.46268449254406,1.24267862617385,5.6369293868419,1.34564891439581,1.82004339502807,3.30567020184881,1.6790777052105,1.68956125490778,3.28600268208111,2.47388331203505,2.20204623293993,8.21386010808421,7.4887801627045,4.4241556887945,1.41907650703115,3.80030541509861,3.11809975146708,5.19177417435696,3.17890167650024,5.04820887983869,5.1691334511102,5.65412119709627,7.54447385884498,5.24296162711571,4.48306251402861,4.71438024037614,5.02570679380746,5.44152920676507,1.55390167361845,1.52513556236109,1.17519231454855,2.31827512838629,2.064507229963,3.47988086107804,3.64426244434412,2.00628841614145,2.82375921308533,1.84130094602871,2.29158205375759,1.20297227640581,1.37016503954128,2.2661816921691,0,2.2516060161211,3.62513927187364,5.1776031175182,3.84013186061454,2.79317411380722,4.26834014385335,2.91728060481953,3.77303692730368,3.49302666055027,5.55616819504038,4.12070114477788,3.20919209591815,5.30664144703975,4.30914809813408,6.41329560712659,3.37109426891577,4.67383612555546,3.84817642002609,7.62069906052918,4.40360438590451,3.47236596834669,2.47251540481984,3.82717192349433,4.11443102862498,5.50174999093946,3.09967046931517,3.0522747492789,5.27012530325851,3.29996970777538,4.57319932181931,5.78753365163254,3.39510284614654,6.17256498823512,4.98267076121531,3.15214343601803,2.45538625901814,3.71848418846318,3.66522560864169,4.99621155875892,2.57324769289949,5.80151845930405,4.01705497344571,5.51478547798789,3.70988536992674
|phase1_expression=5.76535849577258,3.14077866875425,5.0049916332849,6.65421264875026,6.01074875935617,2.85394762250213,2.33612640595526,1.80772652818207,1.54867594366833,1.87251621057595,1.88339765048055,1.59544317990673,4.28001824828014,1.92324885321794,2.6648780945253,4.656931149966,4.19737126876888,3.15462165358238,5.34746291062381,3.39511721438424,2.46625541438102,1.09220046320974,1.56719873483361,2.55987876469451,1.60586496747019,2.29692785646008,2.58457197695445,2.58565479223067,2.66032787238923,3.78045194639896,1.10865255327652,3.17515336729816,6.76571266343027,0,5.19932915552294,3.82339684324532,3.26670970019791,4.18531630736908,2.3440060335714,6.28228492768558,3.52938892818609,3.41522742479223,1.94204141212461,0.881277725829041,0.709638518536602,0.367093504323363,0.782391344348039,3.92445281484804,0.659058548203415,1.55543919259427,1.25987779462826,1.43752564364972,3.35565212115473,1.45072428402269,4.7053131879945,1.28629718017973,2.0057340795713,0,6.47412674750713,7.93486468908049,8.87363964908651,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,0,0.299600110518405,0.768436610643109,8.91730665852908,7.83034442323806,5.04779907243317,3.99911378165325,2.87129103237098,7.10446635446733,8.81778333367775,6.43453150627015,2.20231761998777,1.78762273319263,3.5329502648936,7.91317726381163,5.39777097254217,8.33461392890816,3.07101298901519,2.8138130501584,3.20876320331301,1.47314292736834,3.84403538157578,4.84638559145781,1.74170244666323,2.41828992341714,2.6087803983151,0,0.679971333707751,2.69851595818909,0.649776417447669,2.24013443548668,3.37066608316204,0.511290967734173,0.259786004602869,1.06001872353102,3.66192891419369,1.28326477414318,12.7402619853323,7.11066703153331,0.432982082022428,0.760079596425296,2.02209778005913,2.05530983494308,4.66088190564909,2.22663208597237,1.90833859442749,1.21786191324856,2.30615497256059,0.904335843315735,3.64524992120685,1.63366568728578,2.22475470960936,4.33798070759735,4.42305275974937,3.88240439873782,5.07935492458905,5.81850303762267,1.86391761218122,5.5628351432194,6.91174132484402,5.10914110417183,3.11519323715393,2.39961092397363,1.52484272487678,2.99581278809645,2.28750301409313,4.39790232395025,2.60736480288415,3.06858548796397,2.70124457927428,2.43361894601636,3.1570202793598,2.98576729464223,2.0217820674694,5.47148825304832,3.25301107406759,1.60931473103431,3.06105620669094,4.21973489940002,7.62008790494872,5.25266253167884,4.40398105430725,2.58703370739016,4.74249584452253,4.34943984385984,4.39877810409872,1.53437012699302,3.05851974148158,4.179025998266,1.4404749548556,2.9855140022774,4.91549231119264,2.05878325691772,2.55747149456033,4.76389276831654,5.15957331958412,2.70093092191522,5.20838418287463,4.72234156193769,4.78228049950873,5.11574678450897,3.75582761959467,7.82327793860036,5.10135534731789,6.07419617092652,4.13450928683864,6.14039947186396,3.51280184465681,5.2340503316545,2.73376933133365,4.93942139420565,2.97376904685418,3.70230793328962,4.26576501070468,3.0190767341857,3.99489130098489,4.63872106633688,2.89091456998331,3.99473814836374,3.32170343081158,2.9645811850322,5.27803938480566,4.37704238490532,3.70431765526328,6.29173586057955,2.80979464837102,4.38110801159608,1.89667900953082,2.97046132785295,4.50830942692322,3.25842124552503,2.71533482034676,4.55882829287071,2.52946148497029,2.50937251565324,1.56998727841375,1.35736880313981,1.1858105083486,3.33690211432188,1.76903095601883,4.04751802292737,2.84004169943904,3.61765739628625,1.52775511068852,2.30156909960649,3.08056930872567,3.29473695825698,1.43768206527355,5.58211421502755,2.80833905803104,3.78868316920668,2.51156378930677,0.964887042726734,2.21703828199926,2.08440552947533,5.21487924614483,2.20668611507745,1.40814148973101,3.85264392116176,2.38043640886014,2.34160377429359,3.15270288212382,5.75808193086815,3.34855014180723,2.29408640602033,1.89953480052485,1.73578870297814,1.50791283939272,0.54390568381871,1.96705709207614,3.31124095565679,1.76605648986571,4.10240903072711,2.95082901678016,6.5642441073137,4.73262329124385,1.17131623288992,2.58508077279359,1.43381278771531,2.22798674082394,2.83076530788832,2.02405350837447,2.92255857911312,2.37172666767914,7.06906896127976,3.26462195979018,3.20518086601059,3.74640006513225,3.46437258242324,2.65490276679926,2.6705869977048,3.62788268357701,3.96070667487386,3.54362271456927,2.15204603560749,6.46070732920553,3.99887102425256,3.20847640546249,4.10847785316561,5.27093042874994,2.06271086496374,4.42571487479924,2.70091641046965,3.75140182969988,2.35770738534752,3.19212420556092,2.67553226403106,3.45552943264454,4.56697423671899,2.58138878870081,3.1774810629573,2.8668691747145,2.30840754118072,5.32832608096488,4.58378229453985,4.17803204010978,4.43180429311665,6.41257840585672,2.78137953015765,3.41741761595705,2.06386867963222,2.40752885580625,4.70921142511728,2.7338845544205,3.20289442489132,3.39956859987711,2.09927178485487,4.14599921413271,0,3.16335993581135,2.23651413839534,2.48412283890143,3.9726776242749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|short_description=p3@Trrap
}}
}}

Revision as of 17:39, 18 April 2012

Short description:p3@Trrap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Trrap_5end
Coexpression cluster:NA
Association with transcript: -12bp_to_ENSMUST00000128550_5end
EntrezGene:Trrap
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Trrap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C67.62
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G74.56
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F85.05
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C45.65
thymus, neonate N07.CNhs11211.713-19D37.54
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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