Personal tools

FFCP PHASE1:Mm9::chr5:65194602..65194613,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:65194602..65194613,+
|short_description=p3@Klf3
|description=CAGE_peak_3_at_Klf3_5end
|association_with_transcript=-14bp_to_ENSMUST00000031074_5end
|EntrezGene=16599
|EntrezGene=16599
|HGNC=
|HGNC=
|UniProt=F8WIC9
|UniProt=F8WIC9
|association_with_transcript=-14bp_to_ENSMUST00000031074_5end
|description=CAGE_peak_3_at_Klf3_5end
|id=chr5:65194602..65194613,+
|ontology_enrichment_disease=
|phase1_expression=4.16387002472464,1.39590163055744,0.909998478779072,2.72217790176147,4.50806156951712,1.51091344720701,0.934450562382103,8.65126267058561,2.111830832275,1.63845168425395,0.68487187290202,0.717949430958028,10.9568467155972,9.52882386367072,5.66286595086627,6.68168382386426,15.3903613188192,12.9339487796877,12.4774134581222,8.06340338416257,3.23164502574065,1.29078236561151,0.522399578277871,0.95995453676044,0.45881856213434,1.14846392823004,1.29228598847722,1.72376986148711,0.380046838912748,0.756090389279792,1.10865255327652,0.635030673459631,1.23012957516914,0,2.3108129580102,2.82598897109437,3.67504841272264,8.37063261473815,6.2506827561904,4.18818995179039,11.7646297606203,11.6117732442936,9.71020706062307,4.28049181116963,4.1564541800001,2.20256102594018,0.782391344348039,2.61630187656536,3.07560655828261,3.11087838518853,1.81982348112971,1.43752564364972,11.2414346058683,9.42970784614748,10.4189077734164,2.05807548828758,2.0057340795713,7.73508138416164,1.82084814773638,2.64495489636016,1.26766280701236,1.0165335962074,5.33576877666684,4.49949858640699,4.94433181283487,3.5524005747305,5.69240209984969,5.37905627450176,3.31806759387129,2.56511282830212,1.68259969081106,0.285650984403804,1.10434270475807,0.979926393719632,1.24599112323707,0,0,2.68143409978894,1.53606533256243,1.05509030184155,0.731901148819277,1.04182674111352,0.279182999001381,0,1.06958773443767,0.589257170947335,0.569486723196412,2.05039390407831,0.681535739998656,1.058001841495,10.7249860819621,0.860423876981386,2.03991400112325,0,0.649776417447669,2.68816132258401,2.80888840263504,2.55645483867087,1.03914401841148,1.7666978725517,3.23939865486365,2.56652954828636,7.64415719119937,0,0.649473123033642,0.506719730950197,0.505524445014783,2.96878087269556,11.6522047641227,4.30482203287992,2.4287945747259,3.65358573974569,2.30615497256059,3.01445281105245,4.58595957829249,2.76466500925286,7.91023896749996,6.94076913215576,4.42305275974937,3.558870698843,3.97514733228708,4.363877278217,3.72783522436244,2.92780797011547,1.04723353406728,2.81002760729451,2.03685711660064,4.79922184794726,1.39777249780371,1.19832511523858,0.915001205637253,1.88481528169297,1.56441888173049,0.767146371990992,2.28566849015516,1.78465389374533,6.11036183101898,5.47390670684409,6.06534620240819,8.83855794723191,6.24578126220978,4.13823787980251,4.68161537493908,2.71268672104287,6.5995404176788,5.25266253167884,4.2165776051878,2.06962696591213,2.37124792226126,3.9712276835242,3.87092473160687,3.28793598641362,1.94633074457919,1.74126083261083,1.23469281844766,3.78165106955137,2.80885274925294,1.80143534980301,0.852490498186778,3.93538967817454,3.51789089971644,2.34080679899319,4.02466050494857,3.93528463494808,3.5481435964097,3.0229412817553,3.21928081679543,4.2035523252181,2.63295759861569,3.77585167381919,8.35008738322314,5.11699955988663,5.92785311285837,4.02619256281115,2.52347938276953,2.88132914661996,1.98251269790279,1.32225283331772,5.11891801284562,3.48355007790658,4.25262622362908,6.05050573870028,5.33707305227689,3.04361001780095,3.79623249235609,5.59976446061637,5.27803938480566,4.57599885694647,5.65395852645448,5.39291645192533,1.08069024937347,2.78797782556114,4.55202962287396,3.08470984046268,7.88954149711563,5.29493452397817,5.62462212786115,8.48643420672855,5.94423448968019,6.34723636312289,3.1399745568275,4.44229790118482,0.592905254174298,4.00428253718626,1.76903095601883,2.69834534861824,4.66578279193557,4.10001171579109,3.05551022137704,2.30156909960649,3.72911021582581,2.47105271869273,5.75072826109418,4.46569137202204,2.80833905803104,3.28352541331245,1.4351793081753,2.8946611281802,8.68339993783042,3.97931964718018,3.25929952884052,2.8856664581782,2.34690248288502,3.1826188913945,5.71304738126433,5.65887578787617,5.04432461139811,5.09368786192182,7.65382889555938,6.39066927391378,3.9717545829156,5.06271705035291,4.52373851817817,1.63171705145613,1.96705709207614,7.17435540392304,3.53211297973142,1.64096361229084,1.96721934452011,2.27223834483936,1.57754109708128,1.17131623288992,3.01592756825919,1.19484398976276,1.78238939265915,4.24614796183249,4.04810701674894,2.04579100537918,3.55759000151871,3.53453448063988,6.10342366395555,3.91744328067962,7.98146100832523,9.40329700943452,6.63725691699814,3.15614827001476,2.72091201268276,3.96070667487386,2.95301892880773,4.30409207121498,2.58428293168221,6.18007340111759,5.70395805415554,4.74055136903724,3.16255825724996,9.28219889233682,9.53230896110606,5.58189391497062,3.36332577835162,4.50107773566344,4.61084607469911,3.74574516964348,3.9491764944509,5.78483403317739,1.17335854031855,4.44847348814022,6.17479514553893,3.46261131177108,4.35953952078945,2.17126529741361,1.3130957840345,2.29797259643086,3.78925087618806,2.41052892613663,5.46786818553129,2.68302928352189,4.07427960213366,8.2882121082064,5.60446333656203,5.94823250336959,3.39956859987711,3.07893195112048,3.31679937130617,2.86401185404534,7.11755985557555,4.06638934253697,2.59212817972323,2.29997125615916,1.9652630737156,1.21377911746339,3.88471241909079,2.35580347785627,1.55537967950151,3.72803587852155,1.69107881605257,3.43888055901151,4.96375471371293,5.25018208528929,2.32487682259916,4.22390313726945,4.45957506853865,3.25510962109875,2.9360616439199,0.966336483304024,0.576060012515731,10.1123558601017,3.04087822935246,2.97861775777999,3.24802057444488,6.62398773969681,11.1261558677508,7.3319224207181,8.86137163047463,5.04832249740738,9.75447125183998,8.97353047717881,9.35595655101623,9.42876048075229,11.6876902181569,2.0405734525369,0.887943813496259,0.358855426437903,1.00730769818447,5.9888774149979,3.75364950902364,4.76194223094889,2.35805216986972,7.02200945649509,1.6942555278512,0.920650473014354,1.14579102687879,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,3.21740777510948,2.39414924040619,1.87806966329548,2.67417388775123,4.82110274044359,2.94149613520023,3.77819437262746,2.26638562962784,2.24643446714271,2.52697211763797,2.02783439912192,2.64076877940507,4.12022632867483,3.9695594491019,3.84817642002609,2.38146845641537,3.70829843023538,5.01563973205633,2.06042950401653,3.09117732282234,3.08582327146874,4.61437096014278,3.33810665926249,3.0522747492789,3.48204707536723,3.9768865709088,2.92684756596436,3.6829759601298,2.98769050460896,2.24456908663095,5.10130577933949,3.25064791839359,3.27384834535751,2.63392630016142,3.08650577569826,2.49810577937946,4.91256377735358,4.29742108096597,3.82576664137687,3.08827986767322,2.55054619182464
|phase1_expression=4.16387002472464,1.39590163055744,0.909998478779072,2.72217790176147,4.50806156951712,1.51091344720701,0.934450562382103,8.65126267058561,2.111830832275,1.63845168425395,0.68487187290202,0.717949430958028,10.9568467155972,9.52882386367072,5.66286595086627,6.68168382386426,15.3903613188192,12.9339487796877,12.4774134581222,8.06340338416257,3.23164502574065,1.29078236561151,0.522399578277871,0.95995453676044,0.45881856213434,1.14846392823004,1.29228598847722,1.72376986148711,0.380046838912748,0.756090389279792,1.10865255327652,0.635030673459631,1.23012957516914,0,2.3108129580102,2.82598897109437,3.67504841272264,8.37063261473815,6.2506827561904,4.18818995179039,11.7646297606203,11.6117732442936,9.71020706062307,4.28049181116963,4.1564541800001,2.20256102594018,0.782391344348039,2.61630187656536,3.07560655828261,3.11087838518853,1.81982348112971,1.43752564364972,11.2414346058683,9.42970784614748,10.4189077734164,2.05807548828758,2.0057340795713,7.73508138416164,1.82084814773638,2.64495489636016,1.26766280701236,1.0165335962074,5.33576877666684,4.49949858640699,4.94433181283487,3.5524005747305,5.69240209984969,5.37905627450176,3.31806759387129,2.56511282830212,1.68259969081106,0.285650984403804,1.10434270475807,0.979926393719632,1.24599112323707,0,0,2.68143409978894,1.53606533256243,1.05509030184155,0.731901148819277,1.04182674111352,0.279182999001381,0,1.06958773443767,0.589257170947335,0.569486723196412,2.05039390407831,0.681535739998656,1.058001841495,10.7249860819621,0.860423876981386,2.03991400112325,0,0.649776417447669,2.68816132258401,2.80888840263504,2.55645483867087,1.03914401841148,1.7666978725517,3.23939865486365,2.56652954828636,7.64415719119937,0,0.649473123033642,0.506719730950197,0.505524445014783,2.96878087269556,11.6522047641227,4.30482203287992,2.4287945747259,3.65358573974569,2.30615497256059,3.01445281105245,4.58595957829249,2.76466500925286,7.91023896749996,6.94076913215576,4.42305275974937,3.558870698843,3.97514733228708,4.363877278217,3.72783522436244,2.92780797011547,1.04723353406728,2.81002760729451,2.03685711660064,4.79922184794726,1.39777249780371,1.19832511523858,0.915001205637253,1.88481528169297,1.56441888173049,0.767146371990992,2.28566849015516,1.78465389374533,6.11036183101898,5.47390670684409,6.06534620240819,8.83855794723191,6.24578126220978,4.13823787980251,4.68161537493908,2.71268672104287,6.5995404176788,5.25266253167884,4.2165776051878,2.06962696591213,2.37124792226126,3.9712276835242,3.87092473160687,3.28793598641362,1.94633074457919,1.74126083261083,1.23469281844766,3.78165106955137,2.80885274925294,1.80143534980301,0.852490498186778,3.93538967817454,3.51789089971644,2.34080679899319,4.02466050494857,3.93528463494808,3.5481435964097,3.0229412817553,3.21928081679543,4.2035523252181,2.63295759861569,3.77585167381919,8.35008738322314,5.11699955988663,5.92785311285837,4.02619256281115,2.52347938276953,2.88132914661996,1.98251269790279,1.32225283331772,5.11891801284562,3.48355007790658,4.25262622362908,6.05050573870028,5.33707305227689,3.04361001780095,3.79623249235609,5.59976446061637,5.27803938480566,4.57599885694647,5.65395852645448,5.39291645192533,1.08069024937347,2.78797782556114,4.55202962287396,3.08470984046268,7.88954149711563,5.29493452397817,5.62462212786115,8.48643420672855,5.94423448968019,6.34723636312289,3.1399745568275,4.44229790118482,0.592905254174298,4.00428253718626,1.76903095601883,2.69834534861824,4.66578279193557,4.10001171579109,3.05551022137704,2.30156909960649,3.72911021582581,2.47105271869273,5.75072826109418,4.46569137202204,2.80833905803104,3.28352541331245,1.4351793081753,2.8946611281802,8.68339993783042,3.97931964718018,3.25929952884052,2.8856664581782,2.34690248288502,3.1826188913945,5.71304738126433,5.65887578787617,5.04432461139811,5.09368786192182,7.65382889555938,6.39066927391378,3.9717545829156,5.06271705035291,4.52373851817817,1.63171705145613,1.96705709207614,7.17435540392304,3.53211297973142,1.64096361229084,1.96721934452011,2.27223834483936,1.57754109708128,1.17131623288992,3.01592756825919,1.19484398976276,1.78238939265915,4.24614796183249,4.04810701674894,2.04579100537918,3.55759000151871,3.53453448063988,6.10342366395555,3.91744328067962,7.98146100832523,9.40329700943452,6.63725691699814,3.15614827001476,2.72091201268276,3.96070667487386,2.95301892880773,4.30409207121498,2.58428293168221,6.18007340111759,5.70395805415554,4.74055136903724,3.16255825724996,9.28219889233682,9.53230896110606,5.58189391497062,3.36332577835162,4.50107773566344,4.61084607469911,3.74574516964348,3.9491764944509,5.78483403317739,1.17335854031855,4.44847348814022,6.17479514553893,3.46261131177108,4.35953952078945,2.17126529741361,1.3130957840345,2.29797259643086,3.78925087618806,2.41052892613663,5.46786818553129,2.68302928352189,4.07427960213366,8.2882121082064,5.60446333656203,5.94823250336959,3.39956859987711,3.07893195112048,3.31679937130617,2.86401185404534,7.11755985557555,4.06638934253697,2.59212817972323,2.29997125615916,1.9652630737156,1.21377911746339,3.88471241909079,2.35580347785627,1.55537967950151,3.72803587852155,1.69107881605257,3.43888055901151,4.96375471371293,5.25018208528929,2.32487682259916,4.22390313726945,4.45957506853865,3.25510962109875,2.9360616439199,0.966336483304024,0.576060012515731,10.1123558601017,3.04087822935246,2.97861775777999,3.24802057444488,6.62398773969681,11.1261558677508,7.3319224207181,8.86137163047463,5.04832249740738,9.75447125183998,8.97353047717881,9.35595655101623,9.42876048075229,11.6876902181569,2.0405734525369,0.887943813496259,0.358855426437903,1.00730769818447,5.9888774149979,3.75364950902364,4.76194223094889,2.35805216986972,7.02200945649509,1.6942555278512,0.920650473014354,1.14579102687879,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,3.21740777510948,2.39414924040619,1.87806966329548,2.67417388775123,4.82110274044359,2.94149613520023,3.77819437262746,2.26638562962784,2.24643446714271,2.52697211763797,2.02783439912192,2.64076877940507,4.12022632867483,3.9695594491019,3.84817642002609,2.38146845641537,3.70829843023538,5.01563973205633,2.06042950401653,3.09117732282234,3.08582327146874,4.61437096014278,3.33810665926249,3.0522747492789,3.48204707536723,3.9768865709088,2.92684756596436,3.6829759601298,2.98769050460896,2.24456908663095,5.10130577933949,3.25064791839359,3.27384834535751,2.63392630016142,3.08650577569826,2.49810577937946,4.91256377735358,4.29742108096597,3.82576664137687,3.08827986767322,2.55054619182464
|short_description=p3@Klf3
}}
}}

Revision as of 18:23, 18 April 2012

Short description:p3@Klf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Klf3_5end
Coexpression cluster:NA
Association with transcript: -14bp_to_ENSMUST00000031074_5end
EntrezGene:Klf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Klf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H16.94
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G48.84
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G18.35
heart, neonate N20.CNhs11127.821-26I65.12
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G78.49
kidney, neonate N10.CNhs11206.758-6D55.94
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E67.65
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I47.98
oviduct, adult pregnant day01.CNhs10500.988-6G69.40
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D18.29
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B74.46
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G411.13
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C78.86
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D39.75
thymus, neonate N10.CNhs11194.748-24E48.97
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G79.43
thymus, neonate N30.CNhs11132.1393-42G211.69
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:65194602..65194613,%2B&oldid=930117"