Personal tools

FFCP PHASE1:Mm9::chr4:46151356..46151393,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_2_at_Ncbp1_5end
|description=CAGE_peak_2_at_Ncbp1_5end
|id=chr4:46151356..46151393,+
|id=chr4:46151356..46151393,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=3.52327463630547,3.48975407639361,2.27499619694768,1.81478526784098,2.00358291978539,3.52546471014969,3.03696432774183,2.84071311571468,3.09735188733667,3.04283884218592,4.45166717386313,3.35043067780413,4.28001824828014,6.03200776691082,2.99798785634096,3.03712901084739,2.79824751251259,2.99689057090326,2.87940310572051,2.12194825899015,1.19060606211498,3.07801948722744,2.35079810225042,1.75991665072747,2.06468352960453,1.72269589234506,2.15380998079537,1.50829862880122,3.04037471130198,2.77233142735924,3.76941868114018,4.44521471421742,4.30545351309199,0,3.75507105676657,2.1610503896604,1.42918549383658,2.51118978442145,0.7813353445238,2.61761871986899,2.94115744015507,5.46436387966757,2.42755176515577,1.88845226963366,1.82478476195126,1.65192076945513,0.782391344348039,1.30815093828268,1.97717564461025,0.58328969722285,1.39986421625363,0,1.67782606057736,5.80289713609076,4.7053131879945,1.02903774414379,1.43266719969378,1.03134418455488,1.61853168687678,3.1739458756322,6.33831403506179,2.03306719241479,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,1.15265491596466,2.28117147078651,4.3201900266141,3.57552434297349,1.14260393761521,0.441737081903227,4.65465037016825,3.64212789869298,1.83843757322004,2.20231761998777,1.14918604276669,0.614426133024974,3.03338461779446,2.37867873366265,4.16730696445408,1.3959149950069,0,2.29197371665215,2.65165726926301,2.56269025438385,2.05039390407831,3.86203585999239,1.96486056277642,0.869593466105033,1.72084775396277,2.719885334831,0,3.24888208723835,3.58421509677868,1.82577746171277,1.70430322578058,1.29893002301434,2.12003744706204,2.53518155598025,3.84979432242953,2.54805239706646,0,2.81438353314578,2.28023878927589,4.54972000513305,1.82694207550496,3.88406825470758,1.48442139064825,2.25530924795977,4.26251669636998,2.53677046981664,1.95939432718409,2.11659672844269,2.76466500925286,2.71914464507811,1.15679485535929,2.65383165584962,2.75003644910596,2.20841518460394,1.93950101254089,3.72783522436244,1.46390398505774,1.46612694769419,1.27728527604296,3.35482348616577,2.39961092397363,2.92261522268049,0.748953197024114,4.57500602818627,2.51308704225729,1.39059456153821,1.53429274398198,1.24672826735736,1.62241263067758,2.03678727700633,1.49288364732112,3.0326731012041,2.31486041475121,2.34216797332867,2.06911893990126,1.98068342785884,2.71268672104287,1.56483948048054,1.92170580427275,1.96773621575431,0.258703370739016,3.01795190105979,2.26927296201383,2.46331573829528,1.53437012699302,1.39023624612799,1.39300866608867,2.26360350048738,1.59227413454795,2.1066395619397,2.05878325691772,1.98914449576915,2.48550927042602,1.64168241986767,3.6012412292203,3.78791576936336,1.77087808572663,2.1597395804233,2.79040733700489,1.60964040839772,2.45207218971056,1.6455984991348,0.656669856316381,1.21603214318784,0.730999937126662,1.3173006917463,0.939444931322602,2.73376933133365,2.46971069710283,0.330418782983798,2.64450566663544,2.34617075588757,3.48355007790658,4.38149368495117,2.01683524623343,1.55664630691409,2.28270751335071,0.949058123089023,1.64698954724011,1.50801125280162,1.39269530428806,2.9244613067868,4.49409704327111,1.51296634912286,1.1948476395262,4.55202962287396,3.65595240351132,4.50830942692322,3.05476991767971,3.29719228184964,2.59502533594179,1.70738650235495,2.06654207171443,0.627994911365499,1.85095745882701,2.37162101669719,2.66952169145751,2.94838492669805,2.47348323623339,2.43432145666204,2.894125917029,4.32863948028414,1.15078454980324,0.810676133875177,2.19649130550465,1.43768206527355,2.23284568601102,2.18426371180192,2.02063102357689,2.87035861635059,2.41221760681684,2.03228509183265,3.60033682363921,2.77040459951444,2.20668611507745,1.64283173801951,2.51259386162724,0.952174563544055,2.14647012643579,1.26108115284953,0.8858587585951,1.59454768657487,1.47476983244164,1.55416483679306,0.867894351489069,0,1.08781136763742,3.93411418415229,3.03530420935206,1.12385412991454,1.64096361229084,0.819674726883377,2.52470927204373,2.83957397474631,2.34263246577983,3.23135096599198,2.86762557543062,2.45078541490634,3.39691836946599,4.45291771842384,2.92255857911312,0.790575555893047,2.89189184779626,1.84522110770749,2.13678724400706,1.30309567482861,2.14461159864296,0,1.94224508923985,3.93020624054176,1.13163047853539,0.590603785761546,1.84461088766356,1.03371317267288,1.09060118843252,2.13898427030833,1.8962205476149,2.10837217149998,1.03135543248187,1.36175842301515,1.98067203434441,2.19909762430683,3.64372959553707,1.95074257006501,1.60531935841864,2.46823530903181,2.74018454203139,1.87737366450968,1.69465656691056,1.32317038832977,1.48397627647332,1.93757312035087,2.5934557719107,2.38744688006273,2.62625439592098,2.33184669303881,1.29797711407357,1.70870880797853,1.03193433981611,3.1483069652851,2.82552685507037,2.87057878214153,2.74533807847827,2.37969801991397,2.51912614182584,1.52019971184866,0,4.11236791655476,2.03319467126849,2.37611749807963,1.88179466413022,1.31017538247707,3.10187996685088,1.57041565878138,2.87931536182433,1.55537967950151,1.86401793926078,0.56369293868419,3.13984746692355,1.98550188548517,2.91676782516071,3.48731523389874,3.54807863530634,1.76035857968631,1.5624526181274,1.99232754408851,1.44950472495604,0.576060012515731,4.10814456816632,3.24360344464263,3.69759445793378,3.24802057444488,6.62398773969681,4.76835251475036,6.12996792551841,4.87375439676105,7.26958439626663,6.32516495236499,6.35204966362095,5.9449307251249,6.15755786498109,5.14258369598903,1.81384306892169,1.33191572024439,1.70456327558004,2.18250001273302,0.579568782096571,1.87682475451182,2.19781949120718,3.21552568618599,1.00314420807073,1.6942555278512,0.920650473014354,2.29158205375759,2.06223818812425,1.37016503954128,1.5107877947794,4.72515750162264,1.35096360967266,1.35942722695261,3.10656187051092,2.07574695168353,1.59609949360412,2.21953687480374,2.67417388775123,2.30574478890781,0.919217542250071,1.55572709461131,3.09052585858341,2.24643446714271,1.76888048234658,1.01391719956096,1.50901073108861,1.12369808963859,1.79270426733634,2.35485422718014,2.85776214769844,1.97003354106254,1.54327376370964,2.47251540481984,2.20798380201596,2.05721551431249,1.77475806159337,1.90748951957857,1.74415699958794,2.1645157495526,1.69229215783353,2.0122077016005,1.8414879800649,2.17286582153379,1.68342681497322,2.01679530811096,2.46261205938909,2.45538625901814,3.09873682371932,2.50778594275484,1.74867404556562,2.33931608445408,1.93383948643468,0.57386499620653,1.10295709559758,2.78241402744506
|phase1_expression=3.52327463630547,3.48975407639361,2.27499619694768,1.81478526784098,2.00358291978539,3.52546471014969,3.03696432774183,2.84071311571468,3.09735188733667,3.04283884218592,4.45166717386313,3.35043067780413,4.28001824828014,6.03200776691082,2.99798785634096,3.03712901084739,2.79824751251259,2.99689057090326,2.87940310572051,2.12194825899015,1.19060606211498,3.07801948722744,2.35079810225042,1.75991665072747,2.06468352960453,1.72269589234506,2.15380998079537,1.50829862880122,3.04037471130198,2.77233142735924,3.76941868114018,4.44521471421742,4.30545351309199,0,3.75507105676657,2.1610503896604,1.42918549383658,2.51118978442145,0.7813353445238,2.61761871986899,2.94115744015507,5.46436387966757,2.42755176515577,1.88845226963366,1.82478476195126,1.65192076945513,0.782391344348039,1.30815093828268,1.97717564461025,0.58328969722285,1.39986421625363,0,1.67782606057736,5.80289713609076,4.7053131879945,1.02903774414379,1.43266719969378,1.03134418455488,1.61853168687678,3.1739458756322,6.33831403506179,2.03306719241479,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,1.15265491596466,2.28117147078651,4.3201900266141,3.57552434297349,1.14260393761521,0.441737081903227,4.65465037016825,3.64212789869298,1.83843757322004,2.20231761998777,1.14918604276669,0.614426133024974,3.03338461779446,2.37867873366265,4.16730696445408,1.3959149950069,0,2.29197371665215,2.65165726926301,2.56269025438385,2.05039390407831,3.86203585999239,1.96486056277642,0.869593466105033,1.72084775396277,2.719885334831,0,3.24888208723835,3.58421509677868,1.82577746171277,1.70430322578058,1.29893002301434,2.12003744706204,2.53518155598025,3.84979432242953,2.54805239706646,0,2.81438353314578,2.28023878927589,4.54972000513305,1.82694207550496,3.88406825470758,1.48442139064825,2.25530924795977,4.26251669636998,2.53677046981664,1.95939432718409,2.11659672844269,2.76466500925286,2.71914464507811,1.15679485535929,2.65383165584962,2.75003644910596,2.20841518460394,1.93950101254089,3.72783522436244,1.46390398505774,1.46612694769419,1.27728527604296,3.35482348616577,2.39961092397363,2.92261522268049,0.748953197024114,4.57500602818627,2.51308704225729,1.39059456153821,1.53429274398198,1.24672826735736,1.62241263067758,2.03678727700633,1.49288364732112,3.0326731012041,2.31486041475121,2.34216797332867,2.06911893990126,1.98068342785884,2.71268672104287,1.56483948048054,1.92170580427275,1.96773621575431,0.258703370739016,3.01795190105979,2.26927296201383,2.46331573829528,1.53437012699302,1.39023624612799,1.39300866608867,2.26360350048738,1.59227413454795,2.1066395619397,2.05878325691772,1.98914449576915,2.48550927042602,1.64168241986767,3.6012412292203,3.78791576936336,1.77087808572663,2.1597395804233,2.79040733700489,1.60964040839772,2.45207218971056,1.6455984991348,0.656669856316381,1.21603214318784,0.730999937126662,1.3173006917463,0.939444931322602,2.73376933133365,2.46971069710283,0.330418782983798,2.64450566663544,2.34617075588757,3.48355007790658,4.38149368495117,2.01683524623343,1.55664630691409,2.28270751335071,0.949058123089023,1.64698954724011,1.50801125280162,1.39269530428806,2.9244613067868,4.49409704327111,1.51296634912286,1.1948476395262,4.55202962287396,3.65595240351132,4.50830942692322,3.05476991767971,3.29719228184964,2.59502533594179,1.70738650235495,2.06654207171443,0.627994911365499,1.85095745882701,2.37162101669719,2.66952169145751,2.94838492669805,2.47348323623339,2.43432145666204,2.894125917029,4.32863948028414,1.15078454980324,0.810676133875177,2.19649130550465,1.43768206527355,2.23284568601102,2.18426371180192,2.02063102357689,2.87035861635059,2.41221760681684,2.03228509183265,3.60033682363921,2.77040459951444,2.20668611507745,1.64283173801951,2.51259386162724,0.952174563544055,2.14647012643579,1.26108115284953,0.8858587585951,1.59454768657487,1.47476983244164,1.55416483679306,0.867894351489069,0,1.08781136763742,3.93411418415229,3.03530420935206,1.12385412991454,1.64096361229084,0.819674726883377,2.52470927204373,2.83957397474631,2.34263246577983,3.23135096599198,2.86762557543062,2.45078541490634,3.39691836946599,4.45291771842384,2.92255857911312,0.790575555893047,2.89189184779626,1.84522110770749,2.13678724400706,1.30309567482861,2.14461159864296,0,1.94224508923985,3.93020624054176,1.13163047853539,0.590603785761546,1.84461088766356,1.03371317267288,1.09060118843252,2.13898427030833,1.8962205476149,2.10837217149998,1.03135543248187,1.36175842301515,1.98067203434441,2.19909762430683,3.64372959553707,1.95074257006501,1.60531935841864,2.46823530903181,2.74018454203139,1.87737366450968,1.69465656691056,1.32317038832977,1.48397627647332,1.93757312035087,2.5934557719107,2.38744688006273,2.62625439592098,2.33184669303881,1.29797711407357,1.70870880797853,1.03193433981611,3.1483069652851,2.82552685507037,2.87057878214153,2.74533807847827,2.37969801991397,2.51912614182584,1.52019971184866,0,4.11236791655476,2.03319467126849,2.37611749807963,1.88179466413022,1.31017538247707,3.10187996685088,1.57041565878138,2.87931536182433,1.55537967950151,1.86401793926078,0.56369293868419,3.13984746692355,1.98550188548517,2.91676782516071,3.48731523389874,3.54807863530634,1.76035857968631,1.5624526181274,1.99232754408851,1.44950472495604,0.576060012515731,4.10814456816632,3.24360344464263,3.69759445793378,3.24802057444488,6.62398773969681,4.76835251475036,6.12996792551841,4.87375439676105,7.26958439626663,6.32516495236499,6.35204966362095,5.9449307251249,6.15755786498109,5.14258369598903,1.81384306892169,1.33191572024439,1.70456327558004,2.18250001273302,0.579568782096571,1.87682475451182,2.19781949120718,3.21552568618599,1.00314420807073,1.6942555278512,0.920650473014354,2.29158205375759,2.06223818812425,1.37016503954128,1.5107877947794,4.72515750162264,1.35096360967266,1.35942722695261,3.10656187051092,2.07574695168353,1.59609949360412,2.21953687480374,2.67417388775123,2.30574478890781,0.919217542250071,1.55572709461131,3.09052585858341,2.24643446714271,1.76888048234658,1.01391719956096,1.50901073108861,1.12369808963859,1.79270426733634,2.35485422718014,2.85776214769844,1.97003354106254,1.54327376370964,2.47251540481984,2.20798380201596,2.05721551431249,1.77475806159337,1.90748951957857,1.74415699958794,2.1645157495526,1.69229215783353,2.0122077016005,1.8414879800649,2.17286582153379,1.68342681497322,2.01679530811096,2.46261205938909,2.45538625901814,3.09873682371932,2.50778594275484,1.74867404556562,2.33931608445408,1.93383948643468,0.57386499620653,1.10295709559758,2.78241402744506
|short_description=p2@Ncbp1
|short_description=p2@Ncbp1
}}
}}

Revision as of 21:27, 18 April 2012

Short description:p2@Ncbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ncbp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_001033201, uc008stj.1, uc008stk.1_5end
EntrezGene:Ncbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ncbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I23.70
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F86.13
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C47.27
thymus, neonate N07.CNhs11211.713-19D36.33
thymus, neonate N10.CNhs11194.748-24E46.35
thymus, neonate N20.CNhs11186.820-7A25.94
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:46151356..46151393,%2B&oldid=958138"