FFCP PHASE1:Hg19::chr12:66218904..66218913,+
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Short description: | p11@HMGA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_HMGA2_5end |
Coexpression cluster: | C1682_schwannoma_Fibroblast_hepatoblastoma_Wilms_adrenal_Aortic_meningioma |
Association with transcript: | 1bp_to_ENST00000393577_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | F5H2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@HMGA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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muscle precursor cell | 2.58e-30 | 58 |
myoblast | 2.58e-30 | 58 |
multi-potent skeletal muscle stem cell | 2.58e-30 | 58 |
smooth muscle cell | 2.28e-28 | 43 |
smooth muscle myoblast | 2.28e-28 | 43 |
muscle cell | 9.98e-28 | 55 |
vascular associated smooth muscle cell | 5.14e-26 | 32 |
electrically responsive cell | 2.14e-24 | 61 |
electrically active cell | 2.14e-24 | 61 |
mesodermal cell | 3.72e-18 | 121 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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multilaminar epithelium | 2.25e-27 | 83 |
skeletal muscle tissue | 4.21e-27 | 62 |
striated muscle tissue | 4.21e-27 | 62 |
myotome | 4.21e-27 | 62 |
dense mesenchyme tissue | 2.60e-26 | 73 |
somite | 3.16e-26 | 71 |
presomitic mesoderm | 3.16e-26 | 71 |
presumptive segmental plate | 3.16e-26 | 71 |
dermomyotome | 3.16e-26 | 71 |
trunk paraxial mesoderm | 3.16e-26 | 71 |
Showing 1 to 10 of 53 entries
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