NonredundantMotifs:49

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known49
• db :UNIPROBE
• Id :Six6_2267.5
• name :CELL08
• score :0.04736515660286219
  
• External refs:

EntrezGene:4990
UniProt:4990

• Internal refs:

EntrezGene:4990

Motif matrix

P0 A C G T 1 0.35756470076852 0.0954381691895284 0.34511039070185 0.201886739340102 2 0.415206050345836 0.108700720665511 0.16002991456699 0.316063314421663 3 0.276709760777394 0.105225637673383 0.183596745384779 0.434467856164444 4 0.461480553038693 0.135299782823281 0.303126352691022 0.100093311447003 5 0.190185940392405 0.0355782317102172 0.728289866454078 0.0459459614432999 6 0.0408928353769656 0.024794397047563 0.889495270283205 0.0448174972922664 7 0.197091523306651 0.0182971983172974 0.781124249395739 0.00348702898031239 8 0.00521155486531847 0.00218953848470454 0.0274213737723319 0.965177532877645 9 0.970183493434375 0.00245140087354032 0.0213400888687545 0.00602501682332986 10 0.00464458329716392 0.00238119943200551 0.00378802660826466 0.989186190662566 11 0.0174132553850917 0.955356831012022 0.00726765174211025 0.0199622618607764 12 0.927889438456816 0.0185126412029892 0.0134210299149716 0.0401768904252236 13 0.411060244814999 0.139132912859194 0.0964616346628257 0.353345207662981 14 0.215584622536131 0.23793242948421 0.205422459152599 0.34106048882706 15 0.409188759670912 0.134753734528492 0.0841788916191239 0.371878614181472 16 0.210772190485883 0.273586434178711 0.108006209750002 0.407635165585405 17 0.0917809776490118 0.159161098893513 0.216287548386485 0.53277037507099