NonredundantMotifs:68

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known68
• db :UNIPROBE
• Id :Srf_secondary
• name :SCI09
• score :1.6934130219534125
  
• External refs:

EntrezGene:6722
UniProt:6722

• Internal refs:

EntrezGene:6722

Motif matrix

P0 A C G T 1 0.162967914741135 0.284827804822891 0.440984218018725 0.111220062417249 2 0.151391705490076 0.20063514946357 0.205315927848008 0.442657217198346 3 0.267215083819133 0.0836691785105082 0.192497559567532 0.456618178102827 4 0.332770917001163 0.180710869680599 0.200027237036156 0.286490976282082 5 0.509369565837701 0.102954411962803 0.242568815750995 0.145107206448501 6 0.666262497035337 0.0773094200023419 0.154465739074882 0.101962343887439 7 0.737968450778585 0.113335214159628 0.100400517228193 0.0482958178335944 8 0.6588779783107 0.141579874740754 0.134032554794489 0.0655095921540571 9 0.766114793868655 0.0940507412432602 0.0697627573156272 0.0700717075724578 10 0.755620618291091 0.0884913785101554 0.0448020364832095 0.111085966715544 11 0.749083273531726 0.135916964071178 0.0475095721776551 0.0674901902194415 12 0.663231334824103 0.17679532867608 0.0281340509223841 0.131839285577432 13 0.553358095060765 0.277658903897971 0.0386551743994655 0.130327826641798 14 0.392578441914555 0.314082537936749 0.209843815208581 0.0834952049401149 15 0.198462449591387 0.237131715592036 0.239465590861239 0.324940243955339 16 0.27512128107858 0.210087356294967 0.194778718669854 0.320012643956599 17 0.287747580841454 0.277395048845205 0.142703687726769 0.292153682586572