NonredundantMotifs:26

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known26
• db :HOCOMOCO
• Id :NKX25_f1
• name  :
• score :0.1500228848659613
  
• External refs:

EntrezGene:1482
UniProt:1482

• Internal refs:

EntrezGene:1482

Motif matrix

P0 A C G T 1 6.9891172830846235 3.489005634264109 9.830913701470223 38.27417799753711 2 2.0853826779509625 26.095048510778 9.304015024704292 21.09876840292279 3 57.94155840775569 0.0 0.6416562086002943 0.0 4 53.68503301850056 0.0 2.40621078225111 2.491970815604343 5 0.0 0.6416562086002943 50.78647406524281 7.155084342512888 6 1.770107580929012 0.0 0.8020702607503679 56.01103677467664 7 4.983941631208686 0.0 52.79720272439696 0.8020702607503679