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UBERON:0000307

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Name:blastula
Namespace:FANTOM
Definition:"Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
Xrefs:
links:

BILA:0000059
BTO:0000128
GAID:1294
[ 200px-Blastulation.png 200px-Blastulation.png]
MESH:A.16.254.270.274
OGEM:000006

OpenCyc:Mx4rEetFnKP2EdqAAAACs4vPlg
Synonyms: "blastosphere" RELATED [Wikipedia:Blastula]
"blastula embryo" EXACT [BILA:0000059]
Comments:TODO - check relationship with epiblast. Note in FMA this is not a subclass of embryo, but in uberon embryo is the whole organism from zygote onwards and thus includes the blastula
Alt_id: UBERON:0007011
UBERON:BTO_0000128-FMA_83041
Subset: inconsistent_with_fma

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000922(embryo)
develops_from:UBERON:0007010(cleaving embryo)



Children

develops from:UBERON:0004734 (gastrula)
part of:UBERON:0000358 (blastocyst),UBERON:0006595 (presumptive endoderm),UBERON:0006601 (presumptive ectoderm),UBERON:0006603 (presumptive mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000307 (blastula), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data