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MCL coexpression mm9:66

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:117282143..117282150,-p@chr10:117282143..117282150
-
Mm9::chr10:120911291..120911303,+p@chr10:120911291..120911303
+
Mm9::chr10:18781934..18781943,-p@chr10:18781934..18781943
-
Mm9::chr10:18781972..18781989,-p@chr10:18781972..18781989
-
Mm9::chr10:18782001..18782006,-p@chr10:18782001..18782006
-
Mm9::chr10:34004711..34004717,+p@chr10:34004711..34004717
+
Mm9::chr10:61970649..61970662,+p@chr10:61970649..61970662
+
Mm9::chr10:80086352..80086393,-p@chr10:80086352..80086393
-
Mm9::chr10:96079268..96079300,-p@chr10:96079268..96079300
-
Mm9::chr10:96084020..96084029,+p@chr10:96084020..96084029
+
Mm9::chr10:98376789..98376802,-p@chr10:98376789..98376802
-
Mm9::chr10:98724503..98724525,+p@chr10:98724503..98724525
+
Mm9::chr11:102156783..102156788,+p@chr11:102156783..102156788
+
Mm9::chr11:106648032..106648081,-p@chr11:106648032..106648081
-
Mm9::chr11:106649374..106649377,-p@chr11:106649374..106649377
-
Mm9::chr11:109333550..109333561,+p@chr11:109333550..109333561
+
Mm9::chr11:118007362..118007377,+p@chr11:118007362..118007377
+
Mm9::chr11:51398143..51398189,-p@chr11:51398143..51398189
-
Mm9::chr11:6526123..6526194,+p@chr11:6526123..6526194
+
Mm9::chr11:68908217..68908228,-p@chr11:68908217..68908228
-
Mm9::chr11:68912225..68912230,+p5@Per1
Mm9::chr11:74645296..74645306,-p@chr11:74645296..74645306
-
Mm9::chr11:74645684..74645707,-p@chr11:74645684..74645707
-
Mm9::chr11:74645721..74645737,-p@chr11:74645721..74645737
-
Mm9::chr11:82891834..82891854,+p@chr11:82891834..82891854
+
Mm9::chr11:86618773..86618777,-p@chr11:86618773..86618777
-
Mm9::chr11:96849386..96849396,+p@chr11:96849386..96849396
+
Mm9::chr12:110030851..110030864,-p@chr12:110030851..110030864
-
Mm9::chr12:81361129..81361196,-p2@Actn1
Mm9::chr12:81893979..81894023,-p@chr12:81893979..81894023
-
Mm9::chr12:85516589..85516609,-p@chr12:85516589..85516609
-
Mm9::chr12:85584362..85584377,+p@chr12:85584362..85584377
+
Mm9::chr12:92826788..92826814,-p@chr12:92826788..92826814
-
Mm9::chr12:92826918..92826933,+p@chr12:92826918..92826933
+
Mm9::chr13:114390934..114390939,-p@chr13:114390934..114390939
-
Mm9::chr13:114390947..114390958,-p@chr13:114390947..114390958
-
Mm9::chr13:14158252..14158263,+p@chr13:14158252..14158263
+
Mm9::chr13:49311029..49311045,+p@chr13:49311029..49311045
+
Mm9::chr13:49311525..49311571,+p@chr13:49311525..49311571
+
Mm9::chr13:49403283..49403306,+p@chr13:49403283..49403306
+
Mm9::chr13:5863551..5863560,-p@chr13:5863551..5863560
-
Mm9::chr13:91947385..91947398,+p@chr13:91947385..91947398
+
Mm9::chr14:122277671..122277685,-p@chr14:122277671..122277685
-
Mm9::chr14:22570597..22570606,-p8@Dusp13
Mm9::chr14:37948659..37948687,+p@chr14:37948659..37948687
+
Mm9::chr14:56179177..56179232,-p@chr14:56179177..56179232
-
Mm9::chr14:70180426..70180437,+p@chr14:70180426..70180437
+
Mm9::chr14:76245950..76245954,+p4@Tpt1
Mm9::chr15:36721001..36721006,-p13@Ywhaz
Mm9::chr15:57527217..57527240,+p6@Zhx2
Mm9::chr15:59484457..59484469,-p@chr15:59484457..59484469
-
Mm9::chr15:59484966..59484978,+p@chr15:59484966..59484978
+
Mm9::chr15:81977472..81977489,-p@chr15:81977472..81977489
-
Mm9::chr15:98398453..98398467,+p@chr15:98398453..98398467
+
Mm9::chr16:23988649..23988660,-p@chr16:23988649..23988660
-
Mm9::chr16:91647305..91647351,+p4@Son
Mm9::chr16:91647936..91647959,-p@chr16:91647936..91647959
-
Mm9::chr17:25321327..25321347,-p@chr17:25321327..25321347
-
Mm9::chr17:26698310..26698331,-p1@ENSMUST00000011196
Mm9::chr17:26708047..26708069,+p@chr17:26708047..26708069
+
Mm9::chr17:27070015..27070103,+p1@Phf1
Mm9::chr17:29629785..29629804,-p@chr17:29629785..29629804
-
Mm9::chr17:36053922..36053938,+p1@Ppp1r10
Mm9::chr17:36107001..36107013,+p@chr17:36107001..36107013
+
Mm9::chr17:5189899..5189917,+p@chr17:5189899..5189917
+
Mm9::chr17:73457181..73457216,-p@chr17:73457181..73457216
-
Mm9::chr17:8067736..8067745,-p@chr17:8067736..8067745
-
Mm9::chr17:84545440..84545456,+p@chr17:84545440..84545456
+
Mm9::chr18:3337249..3337274,-p17@Crem
Mm9::chr18:3337844..3337868,+p@chr18:3337844..3337868
+
Mm9::chr18:3338209..3338212,+p@chr18:3338209..3338212
+
Mm9::chr19:24552099..24552117,+p@chr19:24552099..24552117
+
Mm9::chr19:34267072..34267110,-p@chr19:34267072..34267110
-
Mm9::chr19:3769104..3769112,+p@chr19:3769104..3769112
+
Mm9::chr19:41923002..41923005,+p@chr19:41923002..41923005
+
Mm9::chr19:53269820..53269851,+p@chr19:53269820..53269851
+
Mm9::chr19:53465371..53465420,+p@chr19:53465371..53465420
+
Mm9::chr19:53603385..53603399,-p@chr19:53603385..53603399
-
Mm9::chr19:6342562..6342573,+p7@Map4k2
Mm9::chr19:7281173..7281203,+p@chr19:7281173..7281203
+
Mm9::chr1:127331460..127331471,+p@chr1:127331460..127331471
+
Mm9::chr1:133903747..133903752,-p@chr1:133903747..133903752
-
Mm9::chr1:154135165..154135176,-p@chr1:154135165..154135176
-
Mm9::chr1:156945862..156945876,-p@chr1:156945862..156945876
-
Mm9::chr1:157883318..157883388,+p4@Tor1aip2
Mm9::chr1:164501604..164501618,-p@chr1:164501604..164501618
-
Mm9::chr1:174306419..174306449,-p@chr1:174306419..174306449
-
Mm9::chr1:184271857..184271866,+p@chr1:184271857..184271866
+
Mm9::chr1:31006734..31006754,+p@chr1:31006734..31006754
+
Mm9::chr1:33726706..33726725,+p1@ENSMUST00000051203
Mm9::chr1:53841164..53841180,-p@chr1:53841164..53841180
-
Mm9::chr1:53841311..53841320,+p@chr1:53841311..53841320
+
Mm9::chr1:55109442..55109466,-p@chr1:55109442..55109466
-
Mm9::chr1:58479688..58479693,-p@chr1:58479688..58479693
-
Mm9::chr1:7078821..7078863,-p@chr1:7078821..7078863
-
Mm9::chr2:126500378..126500382,+p@chr2:126500378..126500382
+
Mm9::chr2:154483735..154483770,-p@chr2:154483735..154483770
-
Mm9::chr2:154483777..154483786,-p@chr2:154483777..154483786
-
Mm9::chr2:156022259..156022297,-p@chr2:156022259..156022297
-
Mm9::chr2:163900952..163900967,-p@chr2:163900952..163900967
-
Mm9::chr2:164705545..164705561,+p3@Pcif1
Mm9::chr2:167600890..167600901,-p@chr2:167600890..167600901
-
Mm9::chr2:180011557..180011577,-p@chr2:180011557..180011577
-
Mm9::chr2:181116012..181116070,+p1@Lime1
Mm9::chr2:181231683..181231713,-p@chr2:181231683..181231713
-
Mm9::chr2:22923536..22923578,-p@chr2:22923536..22923578
-
Mm9::chr2:24830828..24830840,+p@chr2:24830828..24830840
+
Mm9::chr2:24830856..24830866,+p@chr2:24830856..24830866
+
Mm9::chr2:24831637..24831660,+p4@Pnpla7
Mm9::chr2:25111185..25111205,+p2@Tmem203
Mm9::chr2:28373002..28373004,+p@chr2:28373002..28373004
+
Mm9::chr2:3430364..3430399,+p2@Cdnf
Mm9::chr2:43594536..43594549,-p@chr2:43594536..43594549
-
Mm9::chr2:58009520..58009532,-p9@Cytip
Mm9::chr2:60048486..60048510,-p@chr2:60048486..60048510
-
Mm9::chr2:72818011..72818033,+p@chr2:72818011..72818033
+
Mm9::chr2:75542186..75542197,+p@chr2:75542186..75542197
+
Mm9::chr3:106588322..106588344,+p@chr3:106588322..106588344
+
Mm9::chr3:108714746..108714774,+p@chr3:108714746..108714774
+
Mm9::chr3:120994516..120994532,-p@chr3:120994516..120994532
-
Mm9::chr3:16083833..16083844,-p@chr3:16083833..16083844
-
Mm9::chr3:65762229..65762257,+p@chr3:65762229..65762257
+
Mm9::chr3:68960718..68960760,+p@chr3:68960718..68960760
+
Mm9::chr3:89191054..89191070,-p5@Zbtb7b
Mm9::chr3:89892015..89892019,+p2@Tpm3
Mm9::chr3:90017558..90017592,-p1@Gm9846
p1@Rps27
Mm9::chr3:90070315..90070319,-p@chr3:90070315..90070319
-
Mm9::chr4:107973920..107973932,+p@chr4:107973920..107973932
+
Mm9::chr4:124804695..124804707,+p@chr4:124804695..124804707
+
Mm9::chr4:154574866..154574880,-p@chr4:154574866..154574880
-
Mm9::chr4:154998394..154998430,-p@chr4:154998394..154998430
-
Mm9::chr4:33159911..33159924,-p@chr4:33159911..33159924
-
Mm9::chr4:35173449..35173470,+p@chr4:35173449..35173470
+
Mm9::chr4:35173472..35173491,+p@chr4:35173472..35173491
+
Mm9::chr4:44180641..44180651,-p14@Rnf38
Mm9::chr4:48056387..48056413,+p@chr4:48056387..48056413
+
Mm9::chr4:59594299..59594310,-p@chr4:59594299..59594310
-
Mm9::chr4:94828204..94828213,+p@chr4:94828204..94828213
+
Mm9::chr5:141072537..141072557,-p@chr5:141072537..141072557
-
Mm9::chr5:145962698..145962742,-p1@Zkscan14
Mm9::chr5:149211568..149211585,+p@chr5:149211568..149211585
+
Mm9::chr5:22924332..22924375,-p@chr5:22924332..22924375
-
Mm9::chr5:22924427..22924468,+p@chr5:22924427..22924468
+
Mm9::chr5:22938527..22938545,-p@chr5:22938527..22938545
-
Mm9::chr5:22938568..22938597,-p@chr5:22938568..22938597
-
Mm9::chr5:22939771..22939781,-p3@ENSMUST00000101522
Mm9::chr5:22941071..22941082,-p@chr5:22941071..22941082
-
Mm9::chr5:32000423..32000440,+p3@Bre
Mm9::chr5:65197600..65197603,+p@chr5:65197600..65197603
+
Mm9::chr5:65782624..65782644,-p2@Gm5451
p2@Rpl9
Mm9::chr5:73648195..73648207,+p@chr5:73648195..73648207
+
Mm9::chr5:86602063..86602077,+p@chr5:86602063..86602077
+
Mm9::chr6:112646329..112646343,+p3@ENSMUST00000146834
Mm9::chr6:113646694..113646700,-p@chr6:113646694..113646700
-
Mm9::chr6:122761207..122761239,+p@chr6:122761207..122761239
+
Mm9::chr6:122761522..122761539,+p@chr6:122761522..122761539
+
Mm9::chr6:136752463..136752480,+p@chr6:136752463..136752480
+
Mm9::chr6:145288611..145288628,-p@chr6:145288611..145288628
-
Mm9::chr6:145289534..145289555,+p@chr6:145289534..145289555
+
Mm9::chr6:31076737..31076742,+p@chr6:31076737..31076742
+
Mm9::chr6:38304687..38304702,+p@chr6:38304687..38304702
+
Mm9::chr6:38304706..38304719,+p@chr6:38304706..38304719
+
Mm9::chr6:38304753..38304767,+p@chr6:38304753..38304767
+
Mm9::chr6:38304768..38304780,+p@chr6:38304768..38304780
+
Mm9::chr6:38501212..38501256,-p@chr6:38501212..38501256
-
Mm9::chr6:39155493..39155505,+p@chr6:39155493..39155505
+
Mm9::chr7:109359106..109359134,+p@chr7:109359106..109359134
+
Mm9::chr7:109398734..109398769,+p@chr7:109398734..109398769
+
Mm9::chr7:133728149..133728162,-p10@Cln3
p10@LOC100047702
Mm9::chr7:16880787..16880801,-p@chr7:16880787..16880801
-
Mm9::chr7:16880808..16880835,-p@chr7:16880808..16880835
-
Mm9::chr7:26541097..26541116,-p@chr7:26541097..26541116
-
Mm9::chr7:29160789..29160811,+p@chr7:29160789..29160811
+
Mm9::chr7:29165300..29165304,-p@chr7:29165300..29165304
-
Mm9::chr7:29166033..29166040,-p@chr7:29166033..29166040
-
Mm9::chr7:29166045..29166061,-p@chr7:29166045..29166061
-
Mm9::chr7:29594249..29594270,+p7@Hnrnpl
Mm9::chr7:46773325..46773363,-p@chr7:46773325..46773363
-
Mm9::chr7:7251540..7251560,+p@chr7:7251540..7251560
+
Mm9::chr7:80682573..80682652,-p3@Chd2
Mm9::chr7:80682897..80682944,+p@chr7:80682897..80682944
+
Mm9::chr7:80682950..80682978,+p@chr7:80682950..80682978
+
Mm9::chr7:80703713..80703770,+p@chr7:80703713..80703770
+
Mm9::chr8:125566563..125566572,+p2@2810013P06Rik
Mm9::chr8:125898214..125898227,-p@chr8:125898214..125898227
-
Mm9::chr8:13105353..13105376,-p3@Pcid2
Mm9::chr8:26712542..26712562,-p@chr8:26712542..26712562
-
Mm9::chr8:35218097..35218110,-p@chr8:35218097..35218110
-
Mm9::chr8:48799843..48799865,-p@chr8:48799843..48799865
-
Mm9::chr8:72240314..72240323,-p4@Zfp869
Mm9::chr8:72240336..72240391,-p2@Zfp869
Mm9::chr8:74660628..74660650,-p@chr8:74660628..74660650
-
Mm9::chr8:74660673..74660688,-p@chr8:74660673..74660688
-
Mm9::chr8:74842952..74842970,+p1@Klf2
Mm9::chr8:74843432..74843470,+p@chr8:74843432..74843470
+
Mm9::chr8:74843482..74843506,+p@chr8:74843482..74843506
+
Mm9::chr8:86272895..86272904,+p@chr8:86272895..86272904
+
Mm9::chr8:86721303..86721315,+p@chr8:86721303..86721315
+
Mm9::chr8:86725882..86725891,-p@chr8:86725882..86725891
-
Mm9::chr8:86727567..86727570,-p@chr8:86727567..86727570
-
Mm9::chr8:87502871..87502886,+p@chr8:87502871..87502886
+
Mm9::chr9:108392852..108392878,-p@chr9:108392852..108392878
-
Mm9::chr9:117950276..117950280,+p@chr9:117950276..117950280
+
Mm9::chr9:36575597..36575616,+p2@ENSMUST00000126325
p2@uc009otz.1
Mm9::chr9:45753130..45753140,-p16@Sidt2
Mm9::chr9:45753402..45753433,+p@chr9:45753402..45753433
+
Mm9::chr9:63585614..63585634,+p@chr9:63585614..63585634
+
Mm9::chr9:77764951..77764971,-p@chr9:77764951..77764971
-
Mm9::chr9:7871936..7871947,+p@chr9:7871936..7871947
+
Mm9::chr9:7872985..7873009,-p4@Birc3
Mm9::chrX:138825261..138825274,+p@chrX:138825261..138825274
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005515protein binding0.00969600233514886
GO:0005938cell cortex0.0108215793183714
GO:0043283biopolymer metabolic process0.0316809120672433
GO:0030863cortical cytoskeleton0.0316809120672433



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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