NonredundantMotifs:190

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known190
• db :SWISSREGULON
• Id :AIRE.p2
• name :AIRE
• score :0.10788039600041363
  
• External refs:

EntrezGene:AIRE
UniProt:AIRE

• Internal refs:

EntrezGene:AIRE

Motif matrix

PO A C G T 1 5.614437 10.093608 45.801662 11.446177 2 28.820237 7.40368 29.032744 7.699223 3 6.355252 2.660841 16.424949 47.514842 4 6.665938 4.893482 4.398634 56.99783 5 46.9241 5.594739 4.803222 15.633823 6 0.676141 2.029946 4.773762 65.476035 7 11.072103 0.518439 2.287596 59.077746 8 39.712506 0.819879 16.839537 15.583962 9 53.578608 3.348832 1.036813 14.991631 10 9.947869 0 13.607422 49.400593 11 10.117501 0.477778 1.029747 61.330858 12 3.061658 0 65.401955 4.492271 13 3.601487 1.929929 59.375507 8.048961 14 11.142762 1.933376 8.555628 51.324118 15 16.014959 0.409353 2.899264 53.632308 16 44.665407 1.153007 15.656313 11.481157 17 4.37178 2.424435 4.599827 61.559842 18 50.367439 5.939991 9.855122 6.793332 19 1.293342 4.676801 0.968548 66.017193 20 0.947416 0.843009 2.446755 68.7187039999999 21 3.526923 6.706 47.655218 15.067743 22 12.976002 5.307243 47.188318 7.484321 23 4.526218 9.658324 16.762432 42.00891 24 2.280014 4.4096 5.559723 60.706547 25 36.077052 1.833139 15.782627 19.263066