FFCP PHASE1:Hg19::chr16:68002493..68002558,-
From FANTOM5_SSTAR
Short description: | p1@SLC12A4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC12A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000316341, ENST00000338335_5end |
EntrezGene: | SLC12A4 |
HGNC: | 10913 |
UniProt: | Q9UP95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SLC12A4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 8.88e-13 | 76 |
embryonic cell | 7.02e-11 | 250 |
mesodermal cell | 9.33e-11 | 121 |
smooth muscle cell | 4.72e-10 | 43 |
smooth muscle myoblast | 4.72e-10 | 43 |
muscle precursor cell | 1.61e-09 | 58 |
myoblast | 1.61e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-09 | 58 |
muscle cell | 4.02e-09 | 55 |
vascular associated smooth muscle cell | 3.71e-08 | 32 |
Ontology term | p-value | n |
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epithelium | 2.15e-19 | 306 |
cell layer | 2.82e-19 | 309 |
mesenchyme | 9.52e-17 | 160 |
entire embryonic mesenchyme | 9.52e-17 | 160 |
epithelial tube | 5.22e-16 | 117 |
trunk | 1.42e-15 | 199 |
splanchnic layer of lateral plate mesoderm | 1.34e-14 | 83 |
trunk mesenchyme | 2.73e-14 | 122 |
unilaminar epithelium | 8.73e-14 | 148 |
multilaminar epithelium | 2.22e-13 | 83 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.