CL:0002556
From FANTOM5_SSTAR
| Name: | fibroblast of periodontium |
|---|---|
| Namespace: | cell |
| Definition: | "A fibroblast of the periodontium." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T05:19:48Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast) |
|---|---|
| part_of: | UBERON:0001758(periodontium) |
Children
| derives from: | FF:0000067 (human fibroblast of periodontium sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
Mouse (Mus musculus)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002556 (fibroblast of periodontium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.06e-63 | FFCP PHASE2:Hg19::chr1:75598362..75598407,-#_b41f1b1feb2c2ab125899bd48a5e9d9c | p1@ENST00000427892, p1@uc001dgp.1 |
| 7.06e-63 | FFCP PHASE1:Hg19::chr1:75598362..75598407,-#_b41f1b1feb2c2ab125899bd48a5e9d9c | p1@ENST00000427892, p1@uc001dgp.1 |
| 1.23e-62 | FFCP PHASE2:Hg19::chr1:75599683..75599699,-#_8e661015fd0b5a612ed76ffc704b9481 | p@chr1:75599683..75599699, - |
| 1.23e-62 | FFCP PHASE1:Hg19::chr1:75599683..75599699,-#_8e661015fd0b5a612ed76ffc704b9481 | p@chr1:75599683..75599699, - |
| 2.45e-58 | FFCP PHASE1:Hg19::chr6:707779..707821,+#_cab180e6fe72130a97965bba91a2ee71 | p@chr6:707779..707821, + |
| 2.45e-58 | FFCP PHASE2:Hg19::chr6:707779..707821,+#_cab180e6fe72130a97965bba91a2ee71 | p@chr6:707779..707821, + |
| 4.63e-53 | FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_b95e84088c78b8eee2862bb535e2837f | p@chr1:75599672..75599682, - |
| 4.63e-53 | FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_b95e84088c78b8eee2862bb535e2837f | p@chr1:75599672..75599682, - |
| 9.31e-47 | FFCP PHASE2:Hg19::chr1:75600067..75600094,+#_a6a6a6e91869cbc205c4593c684fef16 | p2@LHX8 |
| 9.31e-47 | FFCP PHASE1:Hg19::chr1:75600067..75600094,+#_a6a6a6e91869cbc205c4593c684fef16 | p2@LHX8 |
| 4.34e-43 | FFCP PHASE1:Hg19::chr1:75602043..75602093,+#_3102ef22116fe41869f6d8fd3273cabf | p1@LHX8 |
| 4.34e-43 | FFCP PHASE2:Hg19::chr1:75602043..75602093,+#_3102ef22116fe41869f6d8fd3273cabf | p1@LHX8 |
| 1.34e-37 | FFCP PHASE1:Hg19::chr6:129908113..129908144,-#_2e90588e2aaa2ec8878e70a75da905a7 | p@chr6:129908113..129908144, - |
| 1.34e-37 | FFCP PHASE2:Hg19::chr6:129908113..129908144,-#_2e90588e2aaa2ec8878e70a75da905a7 | p@chr6:129908113..129908144, - |
| 5.69e-35 | FFCP PHASE2:Hg19::chr2:172953513..172953549,-#_614d77c0c3c28d405d9f35f86e3b6b74 | p@chr2:172953513..172953549, - |
| 5.69e-35 | FFCP PHASE1:Hg19::chr2:172953513..172953549,-#_614d77c0c3c28d405d9f35f86e3b6b74 | p@chr2:172953513..172953549, - |
| 1.19e-32 | FFCP PHASE1:Hg19::chr6:1389871..1389876,+#_b03e1e8ccc7d84719d97fde9b0f8296f | p4@FOXF2 |
| 1.19e-32 | FFCP PHASE2:Hg19::chr6:1389871..1389876,+#_b03e1e8ccc7d84719d97fde9b0f8296f | p4@FOXF2 |
| 2.68e-31 | FFCP PHASE2:Hg19::chr18:34273182..34273194,+#_65e6d8173825ffbf96119fd5fdfa1486 | p6@FHOD3 |
| 2.68e-31 | FFCP PHASE1:Hg19::chr18:34273182..34273194,+#_65e6d8173825ffbf96119fd5fdfa1486 | p6@FHOD3 |
| 2.78e-30 | FFCP PHASE2:Hg19::chr4:152086796..152086808,-#_4e853d1b18fe0d645dfc0609394b8e49 | p18@SH3D19 |
| 2.78e-30 | FFCP PHASE1:Hg19::chr4:152086796..152086808,-#_4e853d1b18fe0d645dfc0609394b8e49 | p18@SH3D19 |
| 7.33e-29 | FFCP PHASE2:Hg19::chr6:1389613..1389637,-#_1f081cb045269195db43207c51a7b7dd | p@chr6:1389613..1389637, - |
| 7.33e-29 | FFCP PHASE1:Hg19::chr6:1389613..1389637,-#_1f081cb045269195db43207c51a7b7dd | p@chr6:1389613..1389637, - |
| 2.08e-27 | FFCP PHASE2:Hg19::chr12:115777087..115777091,+#_0c2d245380ddbc9f4fd624cc3681515e | p@chr12:115777087..115777091, + |
| 2.08e-27 | FFCP PHASE1:Hg19::chr12:115777087..115777091,+#_0c2d245380ddbc9f4fd624cc3681515e | p@chr12:115777087..115777091, + |
| 2.21e-25 | FFCP PHASE2:Hg19::chr11:7987028..7987043,-#_b6e86d866874760306b12794559bbcd6 | p2@NLRP10 |
| 2.21e-25 | FFCP PHASE1:Hg19::chr11:7987028..7987043,-#_b6e86d866874760306b12794559bbcd6 | p2@NLRP10 |
| 4.34e-23 | FFCP PHASE1:Hg19::chr1:75600979..75601005,+#_ec800fe940c2a9dc0ab60ebb09e42196 | p@chr1:75600979..75601005, + |
| 4.34e-23 | FFCP PHASE2:Hg19::chr1:75600979..75601005,+#_ec800fe940c2a9dc0ab60ebb09e42196 | p@chr1:75600979..75601005, + |
| 3.51e-22 | FFCP PHASE2:Hg19::chr18:65337698..65337712,+#_8be1873c0438b21dc89ee5e4f64353d7 | p@chr18:65337698..65337712, + |
| 3.51e-22 | FFCP PHASE1:Hg19::chr18:65337698..65337712,+#_8be1873c0438b21dc89ee5e4f64353d7 | p@chr18:65337698..65337712, + |
| 6.23e-22 | FFCP PHASE2:Hg19::chr1:31882992..31883005,+#_9f85c25ab7642c0e812a1e15fe5fc078 | p14@SERINC2 |
| 6.23e-22 | FFCP PHASE1:Hg19::chr1:31882992..31883005,+#_9f85c25ab7642c0e812a1e15fe5fc078 | p14@SERINC2 |
| 4.63e-21 | FFCP PHASE1:Hg19::chr9:96717678..96717689,-#_e9d52dd3112935b7c616c14c169f30a0 | p2@BARX1 |
| 4.63e-21 | FFCP PHASE2:Hg19::chr9:96717678..96717689,-#_e9d52dd3112935b7c616c14c169f30a0 | p2@BARX1 |
| 5.39e-21 | FFCP PHASE2:Hg19::chr10:28034772..28034783,-#_d4dc452f0b2a4783d312b872fd1d91c9 | p4@MKX |
| 5.39e-21 | FFCP PHASE1:Hg19::chr10:28034772..28034783,-#_d4dc452f0b2a4783d312b872fd1d91c9 | p4@MKX |
| 4.99e-20 | FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_f2ba862d71e50329fe9080f21d370eb7 | p2@PAX9 |
| 4.99e-20 | FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_f2ba862d71e50329fe9080f21d370eb7 | p2@PAX9 |
| 5.89e-20 | FFCP PHASE1:Hg19::chr1:75602768..75602785,+#_ce219e61647b0ba27fe9cb2036a68ea5 | p@chr1:75602768..75602785, + |
| 5.89e-20 | FFCP PHASE2:Hg19::chr1:75602768..75602785,+#_ce219e61647b0ba27fe9cb2036a68ea5 | p@chr1:75602768..75602785, + |
| 6.5e-20 | FFCP PHASE2:Hg19::chr6:148761434..148761452,+#_e5706d1241c3c078ed07275ebe2e440b | p11@SASH1 |
| 6.5e-20 | FFCP PHASE1:Hg19::chr6:148761434..148761452,+#_e5706d1241c3c078ed07275ebe2e440b | p11@SASH1 |
| 3.13e-18 | FFCP PHASE2:Hg19::chr8:57354324..57354335,-#_14cb9fb48e56ed00bb401827dc5697e6 | p@chr8:57354324..57354335, - |
| 3.13e-18 | FFCP PHASE1:Hg19::chr8:57354324..57354335,-#_14cb9fb48e56ed00bb401827dc5697e6 | p@chr8:57354324..57354335, - |
| 3.96e-18 | FFCP PHASE1:Hg19::chr1:83982415..83982420,+#_4e68e276756fcb659c9d40c08c7b5efa | p@chr1:83982415..83982420, + |
| 3.96e-18 | FFCP PHASE2:Hg19::chr1:83982415..83982420,+#_4e68e276756fcb659c9d40c08c7b5efa | p@chr1:83982415..83982420, + |
| 4.73e-18 | FFCP PHASE2:Hg19::chr10:24738381..24738397,+#_8dfde6990832a51ed59150d6edd5badf | p17@KIAA1217 |
| 4.73e-18 | FFCP PHASE1:Hg19::chr10:24738381..24738397,+#_8dfde6990832a51ed59150d6edd5badf | p17@KIAA1217 |
| 6.46e-18 | FFCP PHASE2:Hg19::chr4:108204864..108204887,-#_55457c4509a5d6b6f7de2ae7d6d6b90c | p3@DKK2 |
| 6.46e-18 | FFCP PHASE1:Hg19::chr4:108204864..108204887,-#_55457c4509a5d6b6f7de2ae7d6d6b90c | p3@DKK2 |
| 9.07e-18 | FFCP PHASE1:Hg19::chr1:75602005..75602017,+#_b4a774b186b3e0c32482268f0b7afa3e | p@chr1:75602005..75602017, + |
| 9.07e-18 | FFCP PHASE1:Hg19::chr4:14094655..14094663,+#_b4a774b186b3e0c32482268f0b7afa3e | p@chr4:14094655..14094663, + |
| 9.07e-18 | FFCP PHASE2:Hg19::chr1:75602005..75602017,+#_b4a774b186b3e0c32482268f0b7afa3e | p@chr1:75602005..75602017, + |
| 9.07e-18 | FFCP PHASE1:Hg19::chr1:75602749..75602758,+#_b4a774b186b3e0c32482268f0b7afa3e | p@chr1:75602749..75602758, + |
| 9.07e-18 | FFCP PHASE2:Hg19::chr1:75602749..75602758,+#_b4a774b186b3e0c32482268f0b7afa3e | p@chr1:75602749..75602758, + |
| 9.07e-18 | FFCP PHASE2:Hg19::chr4:14094655..14094663,+#_b4a774b186b3e0c32482268f0b7afa3e | p@chr4:14094655..14094663, + |
| 9.28e-18 | FFCP PHASE1:Hg19::chr6:116479897..116479942,-#_5c1b9ba2c536782e42ad333191fa8b04 | p2@COL10A1 |
| 9.28e-18 | FFCP PHASE2:Hg19::chr6:116479897..116479942,-#_5c1b9ba2c536782e42ad333191fa8b04 | p2@COL10A1 |
| 1.22e-17 | FFCP PHASE1:Hg19::chr10:15761954..15761965,-#_5afa52781077f9c320ca3e8b450b02e7 | p7@ITGA8 |
| 1.22e-17 | FFCP PHASE2:Hg19::chr10:15761954..15761965,-#_5afa52781077f9c320ca3e8b450b02e7 | p7@ITGA8 |
| 1.85e-17 | FFCP PHASE2:Hg19::chr1:241577071..241577081,+#_8b1724ba86d9134d12cb18946cbe54b5 | p@chr1:241577071..241577081, + |
| 1.85e-17 | FFCP PHASE1:Hg19::chr1:241577071..241577081,+#_8b1724ba86d9134d12cb18946cbe54b5 | p@chr1:241577071..241577081, + |
| 3.81e-17 | FFCP PHASE2:Hg19::chr6:1389647..1389668,-#_fa08bb518c0d9cab2ff752d92d81105b | p@chr6:1389647..1389668, - |
| 3.81e-17 | FFCP PHASE1:Hg19::chr6:1389647..1389668,-#_fa08bb518c0d9cab2ff752d92d81105b | p@chr6:1389647..1389668, - |
| 4.15e-17 | FFCP PHASE2:Hg19::chr1:68257383..68257394,-#_4a120f360e13e1c636b8951d0bbe344a | p@chr1:68257383..68257394, - |
| 4.15e-17 | FFCP PHASE1:Hg19::chr1:68257383..68257394,-#_4a120f360e13e1c636b8951d0bbe344a | p@chr1:68257383..68257394, - |
| 6.03e-17 | FFCP PHASE2:Hg19::chr6:148761457..148761478,+#_154b2c689388e1bb21da5c81b4745aa1 | p8@SASH1 |
| 6.03e-17 | FFCP PHASE1:Hg19::chr6:148761457..148761478,+#_154b2c689388e1bb21da5c81b4745aa1 | p8@SASH1 |
| 2.11e-16 | FFCP PHASE2:Hg19::chr4:47857451..47857469,-#_785d33213671fa726e5343f5f1574b4d | p@chr4:47857451..47857469, - |
| 2.11e-16 | FFCP PHASE1:Hg19::chr4:47857451..47857469,-#_785d33213671fa726e5343f5f1574b4d | p@chr4:47857451..47857469, - |
| 2.59e-16 | FFCP PHASE2:Hg19::chr15:33406335..33406350,-#_f24fc7d3eeb6673062683738e5510c49 | p@chr15:33406335..33406350, - |
| 2.59e-16 | FFCP PHASE1:Hg19::chr15:33406335..33406350,-#_f24fc7d3eeb6673062683738e5510c49 | p@chr15:33406335..33406350, - |
| 3.17e-16 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_bf9d9b0a579274fdad582ca438375865 | p1@ENST00000555639 |
| 3.17e-16 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_bf9d9b0a579274fdad582ca438375865 | p1@ENST00000555639 |
| 4.64e-16 | FFCP PHASE2:Hg19::chr18:34273196..34273214,+#_5f16840b63589af4f282a0dc68433914 | p2@FHOD3 |
| 4.64e-16 | FFCP PHASE1:Hg19::chr18:34273196..34273214,+#_5f16840b63589af4f282a0dc68433914 | p2@FHOD3 |
| 7.23e-16 | FFCP PHASE2:Hg19::chr3:37204870..37204881,-#_c29ca3c5ca8ae872a4708804884f1363 | p@chr3:37204870..37204881, - |
| 7.23e-16 | FFCP PHASE1:Hg19::chr3:37204870..37204881,-#_c29ca3c5ca8ae872a4708804884f1363 | p@chr3:37204870..37204881, - |
| 1.02e-15 | FFCP PHASE2:Hg19::chr2:12246664..12246694,+#_4051fbc44359416383a78ef14ca7764e | p1@ENST00000449986 |
| 1.02e-15 | FFCP PHASE1:Hg19::chr2:12246664..12246694,+#_4051fbc44359416383a78ef14ca7764e | p1@ENST00000449986 |
| 1.12e-15 | FFCP PHASE2:Hg19::chr4:152090554..152090566,+#_7eda14d47605380c1ebce42686b648e5 | p@chr4:152090554..152090566, + |
| 1.12e-15 | FFCP PHASE1:Hg19::chr4:152090554..152090566,+#_7eda14d47605380c1ebce42686b648e5 | p@chr4:152090554..152090566, + |
| 1.13e-15 | FFCP PHASE1:Hg19::chr8:57354211..57354220,+#_ff2c825cbb95c018b9b364ac182caea5 | p@chr8:57354211..57354220, + |
| 1.13e-15 | FFCP PHASE2:Hg19::chr18:59685444..59685459,-#_ff2c825cbb95c018b9b364ac182caea5 | p@chr18:59685444..59685459, - |
| 1.13e-15 | FFCP PHASE1:Hg19::chr18:59685444..59685459,-#_ff2c825cbb95c018b9b364ac182caea5 | p@chr18:59685444..59685459, - |
| 1.13e-15 | FFCP PHASE2:Hg19::chr8:57354211..57354220,+#_ff2c825cbb95c018b9b364ac182caea5 | p@chr8:57354211..57354220, + |
| 1.31e-15 | FFCP PHASE1:Hg19::chr1:75600318..75600329,+#_9275fd85d78cfc7b78d4fef133bda769 | p4@LHX8 |
| 1.31e-15 | FFCP PHASE2:Hg19::chr1:75600318..75600329,+#_9275fd85d78cfc7b78d4fef133bda769 | p4@LHX8 |
| 1.31e-15 | FFCP PHASE2:Hg19::chr4:13890014..13890023,+#_9275fd85d78cfc7b78d4fef133bda769 | p@chr4:13890014..13890023, + |
| 1.31e-15 | FFCP PHASE1:Hg19::chr4:13890014..13890023,+#_9275fd85d78cfc7b78d4fef133bda769 | p@chr4:13890014..13890023, + |
| 2.33e-15 | FFCP PHASE2:Hg19::chr10:28033614..28033628,-#_c80cbfa465f820d96fbde12296a3a8e6 | p@chr10:28033614..28033628, - |
| 2.33e-15 | FFCP PHASE1:Hg19::chr10:28033614..28033628,-#_c80cbfa465f820d96fbde12296a3a8e6 | p@chr10:28033614..28033628, - |
| 4.6e-15 | FFCP PHASE2:Hg19::chr8:57354251..57354262,-#_c81ef4d8cc17eaff90247c8be691c1cc | p@chr8:57354251..57354262, - |
| 4.6e-15 | FFCP PHASE1:Hg19::chr8:57354251..57354262,-#_c81ef4d8cc17eaff90247c8be691c1cc | p@chr8:57354251..57354262, - |
| 5.3e-15 | FFCP PHASE2:Hg19::chr7:134005080..134005095,-#_c21794f584a6eb622e055f1314cce94d | p@chr7:134005080..134005095, - |
| 5.3e-15 | FFCP PHASE1:Hg19::chr7:134005080..134005095,-#_c21794f584a6eb622e055f1314cce94d | p@chr7:134005080..134005095, - |
| 5.54e-15 | FFCP PHASE2:Hg19::chr17:78808278..78808309,-#_9dac96cca2482d77c51708f1c5087055 | p@chr17:78808278..78808309, - |
| 5.54e-15 | FFCP PHASE1:Hg19::chr17:78808278..78808309,-#_9dac96cca2482d77c51708f1c5087055 | p@chr17:78808278..78808309, - |
