Personal tools

DOID:4045

From FANTOM5_SSTAR

Revision as of 10:35, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:muscle cancer
Namespace:disease_ontology
Definition:"A musculoskeletal system cancer that is located_in muscle." [url:http://en.wikipedia.org/wiki/Muscle]
Xrefs:
links:

MSH:D009217
SNOMEDCT_2010_1_31:20667008
SNOMEDCT_2010_1_31:363495004
SNOMEDCT_2010_1_31:93913006
UMLS_CUI:C0027095

UMLS_CUI:C0684743
Synonyms: "malignant neoplasm of muscle, NOS" EXACT [SNOMEDCT_2005_07_31:93913006]
"malignant tumor of muscle (disorder)" EXACT [SNOMEDCT_2005_07_31:363495004]
"malignant tumor of the Muscle" EXACT [NCI2004_11_17:C4883]
"myosarcoma" EXACT []
"Myosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:20667008]
Alt_id: DOID:4046

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:0060100(musculoskeletal system cancer)



Children


is a:DOID:4043 (skeletal muscle cancer),DOID:4230 (smooth muscle cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4045 (muscle cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data