DOID:3151

Name:	skin squamous cell carcinoma
Namespace:	disease_ontology
Xrefs:	Expandlinks: NCI:C4819 SNOMEDCT_2010_1_31:254651007 UMLS_CUI:C0553723
Synonyms:	"Epidermoid skin carcinoma" EXACT [NCI2004_11_17:C4819] "squamous cell carcinoma of skin" RELATED [] "squamous cell carcinoma of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:254651007]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	DOID:3451(skin carcinoma)

Children

is a:	DOID:3149 (keratoacanthoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

• 10713-109I2
• 10791-110H8 (keratoacanthoma cell line:HKA-1)

Mouse (Mus musculus)

• 10713-109I2
• 10791-110H8 (keratoacanthoma cell line:HKA-1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3151 (skin squamous cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
2.55e-98	FFCP PHASE2:Hg19::chr7:101448249..101448254,+	p@chr7:101448249..101448254, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448277..101448287,+	p@chr7:101448277..101448287, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448101..101448113,+	p@chr7:101448101..101448113, +
2.55e-98	FFCP PHASE1:Hg19::chr8:123875147..123875159,+	p26@ZHX2
2.55e-98	FFCP PHASE2:Hg19::chr7:101448277..101448287,+	p@chr7:101448277..101448287, +
2.55e-98	FFCP PHASE1:Hg19::chr1:153431372..153431378,-	p4@S100A7
2.55e-98	FFCP PHASE2:Hg19::chr7:101448101..101448113,+	p@chr7:101448101..101448113, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448176..101448184,+	p@chr7:101448176..101448184, +
2.55e-98	FFCP PHASE2:Hg19::chr8:123875147..123875159,+	p26@ZHX2
2.55e-98	FFCP PHASE2:Hg19::chr1:153431372..153431378,-	p4@S100A7
2.55e-98	FFCP PHASE2:Hg19::chr7:101448176..101448184,+	p@chr7:101448176..101448184, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448249..101448254,+	p@chr7:101448249..101448254, +
1.23e-66	FFCP PHASE1:Hg19::chr9:97563078..97563086,+	p@chr9:97563078..97563086, +
1.23e-66	FFCP PHASE2:Hg19::chr9:97563078..97563086,+	p@chr9:97563078..97563086, +
1.23e-66	FFCP PHASE1:Hg19::chr20:49047228..49047236,-	p@chr20:49047228..49047236, -
1.23e-66	FFCP PHASE2:Hg19::chr20:49047228..49047236,-	p@chr20:49047228..49047236, -
2.39e-66	FFCP PHASE1:Hg19::chr1:76127067..76127073,-	p@chr1:76127067..76127073, -
2.39e-66	FFCP PHASE1:Hg19::chr18:61254400..61254410,+	p8@SERPINB13
2.39e-66	FFCP PHASE2:Hg19::chr1:76127067..76127073,-	p@chr1:76127067..76127073, -
2.39e-66	FFCP PHASE2:Hg19::chr18:61254400..61254410,+	p8@SERPINB13
2.39e-66	FFCP PHASE2:Hg19::chr17:19648916..19648937,-	p10@ALDH3A1
2.39e-66	FFCP PHASE1:Hg19::chr17:19648916..19648937,-	p10@ALDH3A1
4.66e-66	FFCP PHASE1:Hg19::chr19:51517875..51517889,-	p3@AK026045
4.66e-66	FFCP PHASE1:Hg19::chr2:178179611..178179619,-	p4@ENST00000443132
4.66e-66	FFCP PHASE1:Hg19::chr17:48072063..48072074,-	p5@DLX3
4.66e-66	FFCP PHASE1:Hg19::chr1:18085798..18085805,+	p@chr1:18085798..18085805, +
4.66e-66	FFCP PHASE2:Hg19::chr19:51517875..51517889,-	p3@AK026045
4.66e-66	FFCP PHASE2:Hg19::chr2:178179611..178179619,-	p4@ENST00000443132
4.66e-66	FFCP PHASE2:Hg19::chr1:18085798..18085805,+	p@chr1:18085798..18085805, +
4.66e-66	FFCP PHASE1:Hg19::chr13:28542963..28542973,-	p1@CU677005
4.66e-66	FFCP PHASE2:Hg19::chr17:48072063..48072074,-	p5@DLX3
4.66e-66	FFCP PHASE1:Hg19::chr1:10980427..10980431,-	p@chr1:10980427..10980431, -
4.66e-66	FFCP PHASE1:Hg19::chr3:193809263..193809278,+	p1@ENST00000457815
4.66e-66	FFCP PHASE2:Hg19::chr1:10980427..10980431,-	p@chr1:10980427..10980431, -
4.66e-66	FFCP PHASE2:Hg19::chr13:28542963..28542973,-	p1@CU677005
4.66e-66	FFCP PHASE2:Hg19::chr3:193809263..193809278,+	p1@ENST00000457815
1.46e-50	FFCP PHASE2:Hg19::chr1:151826151..151826159,-	p3@THEM5
1.46e-50	FFCP PHASE1:Hg19::chr16:55600644..55600645,+	p2@CAPNS2
1.46e-50	FFCP PHASE2:Hg19::chr16:55600644..55600645,+	p2@CAPNS2
1.46e-50	FFCP PHASE1:Hg19::chr5:1884077..1884085,+	p1@ENST00000506335
1.46e-50	FFCP PHASE2:Hg19::chr5:1884077..1884085,+	p1@ENST00000506335
1.46e-50	FFCP PHASE1:Hg19::chr1:151826151..151826159,-	p3@THEM5
2.42e-50	FFCP PHASE1:Hg19::chr8:123875131..123875140,+	p25@ZHX2
2.42e-50	FFCP PHASE1:Hg19::chr17:77774350..77774360,+	p@chr17:77774350..77774360, +
2.42e-50	FFCP PHASE2:Hg19::chr8:123875131..123875140,+	p25@ZHX2
2.42e-50	FFCP PHASE2:Hg19::chr17:77774350..77774360,+	p@chr17:77774350..77774360, +
2.42e-50	FFCP PHASE1:Hg19::chr12:130647145..130647153,+	p3@FZD10
2.42e-50	FFCP PHASE2:Hg19::chr12:130647145..130647153,+	p3@FZD10
2.42e-50	FFCP PHASE1:Hg19::chr8:120233966..120233975,+	p@chr8:120233966..120233975, +
2.42e-50	FFCP PHASE2:Hg19::chr8:120233966..120233975,+	p@chr8:120233966..120233975, +
2.42e-50	FFCP PHASE1:Hg19::chr7:101448204..101448229,+	p@chr7:101448204..101448229, +
2.42e-50	FFCP PHASE2:Hg19::chr7:101448204..101448229,+	p@chr7:101448204..101448229, +
2.42e-50	FFCP PHASE1:Hg19::chr1:86921028..86921032,+	p@chr1:86921028..86921032, +
2.42e-50	FFCP PHASE2:Hg19::chr1:86921028..86921032,+	p@chr1:86921028..86921032, +
3.99e-50	FFCP PHASE1:Hg19::chr2:234526341..234526346,+	p1@UGT1A8
3.99e-50	FFCP PHASE2:Hg19::chr2:234526341..234526346,+	p1@UGT1A8
6.58e-50	FFCP PHASE2:Hg19::chr3:136885144..136885147,+	p@chr3:136885144..136885147, +
6.58e-50	FFCP PHASE1:Hg19::chr1:153430422..153430443,-	p3@S100A7
6.58e-50	FFCP PHASE2:Hg19::chr10:54259346..54259353,+	p@chr10:54259346..54259353, +
6.58e-50	FFCP PHASE1:Hg19::chr10:54259346..54259353,+	p@chr10:54259346..54259353, +
6.58e-50	FFCP PHASE2:Hg19::chr1:153430422..153430443,-	p3@S100A7
6.58e-50	FFCP PHASE1:Hg19::chr14:65406349..65406358,+	p@chr14:65406349..65406358, +
6.58e-50	FFCP PHASE1:Hg19::chr1:118570948..118570964,-	p@chr1:118570948..118570964, -
6.58e-50	FFCP PHASE2:Hg19::chr1:118570948..118570964,-	p@chr1:118570948..118570964, -
6.58e-50	FFCP PHASE1:Hg19::chr4:152117165..152117168,+	p@chr4:152117165..152117168, +
6.58e-50	FFCP PHASE2:Hg19::chr4:152117165..152117168,+	p@chr4:152117165..152117168, +
6.58e-50	FFCP PHASE2:Hg19::chr14:65406349..65406358,+	p@chr14:65406349..65406358, +
6.58e-50	FFCP PHASE2:Hg19::chr10:127591699..127591713,-	p@chr10:127591699..127591713, -
6.58e-50	FFCP PHASE1:Hg19::chr10:127591699..127591713,-	p@chr10:127591699..127591713, -
6.58e-50	FFCP PHASE1:Hg19::chr3:136885144..136885147,+	p@chr3:136885144..136885147, +
6.62e-41	FFCP PHASE2:Hg19::chr1:152572708..152572714,+	p1@LCE3C
6.62e-41	FFCP PHASE2:Hg19::chr17:39674844..39674854,+	p@chr17:39674844..39674854, +
6.62e-41	FFCP PHASE1:Hg19::chr17:39674844..39674854,+	p@chr17:39674844..39674854, +
6.62e-41	FFCP PHASE1:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
6.62e-41	FFCP PHASE2:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
6.62e-41	FFCP PHASE1:Hg19::chr1:152572708..152572714,+	p1@LCE3C
9.91e-41	FFCP PHASE2:Hg19::chr5:67829374..67829382,-	p1@ENST00000515199
9.91e-41	FFCP PHASE2:Hg19::chr17:39675950..39675974,-	p@chr17:39675950..39675974, -
9.91e-41	FFCP PHASE1:Hg19::chr8:123875175..123875188,+	p22@ZHX2
9.91e-41	FFCP PHASE1:Hg19::chr3:141678730..141678768,-	p@chr3:141678730..141678768, -
9.91e-41	FFCP PHASE2:Hg19::chr8:123875175..123875188,+	p22@ZHX2
9.91e-41	FFCP PHASE2:Hg19::chr3:141678730..141678768,-	p@chr3:141678730..141678768, -
9.91e-41	FFCP PHASE1:Hg19::chr17:39675950..39675974,-	p@chr17:39675950..39675974, -
9.91e-41	FFCP PHASE1:Hg19::chr5:67829374..67829382,-	p1@ENST00000515199
1.48e-40	FFCP PHASE2:Hg19::chr17:39767356..39767365,+	p@chr17:39767356..39767365, +
1.48e-40	FFCP PHASE2:Hg19::chr10:4951559..4951578,+	p@chr10:4951559..4951578, +
1.48e-40	FFCP PHASE1:Hg19::chr10:4951559..4951578,+	p@chr10:4951559..4951578, +
1.48e-40	FFCP PHASE1:Hg19::chr17:39767356..39767365,+	p@chr17:39767356..39767365, +
2.21e-40	FFCP PHASE1:Hg19::chr22:48134043..48134048,+	p@chr22:48134043..48134048, +
2.21e-40	FFCP PHASE2:Hg19::chr22:48134043..48134048,+	p@chr22:48134043..48134048, +
2.21e-40	FFCP PHASE1:Hg19::chr21:23573043..23573054,+	p@chr21:23573043..23573054, +
2.21e-40	FFCP PHASE2:Hg19::chr21:23573043..23573054,+	p@chr21:23573043..23573054, +
3.3e-40	FFCP PHASE1:Hg19::chr4:15937680..15937694,+	p@chr4:15937680..15937694, +
3.3e-40	FFCP PHASE2:Hg19::chr4:15937680..15937694,+	p@chr4:15937680..15937694, +
3.3e-40	FFCP PHASE1:Hg19::chr5:16492681..16492683,+	p@chr5:16492681..16492683, +
3.3e-40	FFCP PHASE1:Hg19::chr17:7990883..7990893,-	p5@ALOX12B
3.3e-40	FFCP PHASE1:Hg19::chr8:120128977..120128984,-	p@chr8:120128977..120128984, -
3.3e-40	FFCP PHASE2:Hg19::chr8:120128977..120128984,-	p@chr8:120128977..120128984, -
3.3e-40	FFCP PHASE2:Hg19::chr5:16492681..16492683,+	p@chr5:16492681..16492683, +
3.3e-40	FFCP PHASE2:Hg19::chr17:7990883..7990893,-	p5@ALOX12B

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