CL:0002092
From FANTOM5_SSTAR
Name: | bone marrow cell | ||
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Namespace: | cell | ||
Definition: | "A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells." [GOC:tfm, ISBN:0618947256] | ||
Xrefs: |
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Created by: | tmeehan | ||
Creation date: | 2010-07-22T04:48:15Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002320(connective tissue cell) |
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Children
is a: | CL:0002540 (mesenchymal stem cell of the bone marrow),CL:1001610 (bone marrow hematopoietic cell) |
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derives from: | FF:0000020 (human CD133-positive progenitor cell- bone marrow derived sample),FF:0100583 (bone marrow cancer cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10474-106I6 (myeloma cell line:PCM6)
- 10574-108B7
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
- 10745-110C7
- 10773-110F8
- 11293-117A6 (Canine Mesenchymal stem cells - bone marrow derived, donor1)
- 11294-117A7 (Chicken Mesenchymal stem cells - bone marrow derived, donor1)
- 11296-117A9 (Rat Mesenchymal stem cells - bone marrow derived, donor1)
... further results Mouse (Mus musculus)
- 10474-106I6 (myeloma cell line:PCM6)
- 10574-108B7
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
- 10745-110C7
- 10773-110F8
- 11293-117A6 (Canine Mesenchymal stem cells - bone marrow derived, donor1)
- 11294-117A7 (Chicken Mesenchymal stem cells - bone marrow derived, donor1)
- 11296-117A9 (Rat Mesenchymal stem cells - bone marrow derived, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002092 (bone marrow cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data