Personal tools

MacroAPE 1083:CNhs11777 bu f2

From FANTOM5_SSTAR

Revision as of 13:34, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs11777_bu_f2

Motif matrix
POACGT
1335.1743634781142196.23715480977904131.36925880029406512.6637940625931
241.845682537989376457.7677381672346327.00991135401915348.8212390915372
35.6982124968151044387.26176058475867.627026782944883774.8575712862616
43.27117504221769861.7737463443815784449.81545986148035720.5841899027006
50.143496675484662083.015592798930143814.8838741374656357.4016075389007
60.01175.4445711507820.00.0
70.340835763416979960.340835763416979960.340835763416979961174.4220638605311
826.3541975835824386.540775862674503.2835485895401259.2660491149836
967.36090348002065422.567386498009943.26501846729357642.2512627054563
10109.75634081126523260.7472996521954194.0513717751155610.8895589122036

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

DOT6#MA0351.100.00566152.69487110TCTTGCTGTTTTCTGCACCTCATCGCATCCT+
AZF1#MA0277.1-20.005945362.8299918TCTTGCTGTTTTTCTTTTT-
Trl#MA0205.1-20.007953633.7859318TCTTGCTGTTTTGCTCTCTC+
CUP2#MA0287.130.008591924.0897518TCTTGCTGTTCATTTCTGCTG-
CRZ1#MA0285.1-10.01004064.7793119TCTTGCTGTTGTGGCTTAG-
Myf#MA0055.110.01273356.06112110TCTTGCTGTTCAGCAGCTGCTG-
Spz1#MA0111.1-40.01317766.2725516TCTTGCTGTTGCTGTTACCCT-
id1#MA0120.1-20.01433896.825318TCTTGCTGTTTTTTCCTTTTCG+
Dof2#MA0020.1-30.01584567.5424916TCTTGCTGTTTGCTTT-
ACE2#MA0267.1-30.01721688.195217TCTTGCTGTTTGCTGGT-
Klf4#MA0039.100.01965439.35542110TCTTGCTGTTCCTTCCTTTA-
HMG-I/Y#MA0045.110.01982129.43488110TCTTGCTGTTGTTTTTCCATTTGTTG-