MacroAPE 1083:SOX18 f1

Full Name: SOX18_f1

Motif matrix

PO A C G T 1 0.5205479452054792 0.5205479452054792 6.43835616438356 0.5205479452054792 2 1.972602739726024 0.986301369863016 5.04109589041096 0.0 3 5.04109589041096 0.986301369863016 1.972602739726024 0.0 4 3.068493150684928 2.95890410958904 0.986301369863016 0.986301369863016 5 3.068493150684928 0.986301369863016 2.95890410958904 0.986301369863016 6 5.04109589041096 0.0 0.986301369863016 1.972602739726024 7 2.08219178082192 1.972602739726024 2.95890410958904 0.986301369863016 8 4.931506849315072 0.0 2.08219178082192 0.986301369863016 9 6.027397260273976 0.0 0.0 1.972602739726024 10 0.0 8.0 0.0 0.0 11 8.0 0.0 0.0 0.0 12 8.0 0.0 0.0 0.0 13 2.95890410958904 0.0 0.0 5.04109589041096 14 0.0 0.986301369863016 3.945205479452056 3.068493150684928 15 0.986301369863016 1.972602739726024 3.068493150684928 1.972602739726024 16 1.972602739726024 0.986301369863016 2.95890410958904 2.08219178082192 17 2.95890410958904 0.986301369863016 0.0 4.054794520547944 18 1.972602739726024 0.0 2.95890410958904 3.068493150684928 19 0.2465753424657536 4.301369863013696 2.219178082191784 1.232876712328768

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
D#MA00445.1	-5	7.66241e-06	0.00364731	0.00594802	11	GGAAAAGAACAATGGGTTC	AGAACAATGGA	-
SOX9#MA0077.1	-6	1.26951e-05	0.00604288	0.00594802	9	GGAAAAGAACAATGGGTTC	GAACAATGG	+
SRY#MA0084.1	-4	3.42782e-05	0.0163164	0.00921693	9	GGAAAAGAACAATGGGTTC	GTAAACAAT	+
ROX1#MA0371.1	-4	3.93442e-05	0.0187279	0.00921693	12	GGAAAAGAACAATGGGTTC	GAGAACAATGGA	-
Sox5#MA0087.1	-6	0.000159547	0.0759444	0.0299009	7	GGAAAAGAACAATGGGTTC	AAACAAT	+
Sox17#MA0078.1	-7	0.00050187	0.23889	0.07838	9	GGAAAAGAACAATGGGTTC	GACAATGAG	-
HCM1#MA0317.1	-4	0.000912696	0.434443	0.122178	8	GGAAAAGAACAATGGGTTC	ATAAACAA	+
id1#MA0120.1	0	0.00139441	0.663739	0.148446	12	GGAAAAGAACAATGGGTTC	CGAAAAGGAAAA	-
SOX10#MA0442.1	-8	0.00142576	0.678663	0.148446	6	GGAAAAGAACAATGGGTTC	ACAAAG	-
br_Z1#MA0010.1	-1	0.00237772	1.13179	0.214324	14	GGAAAAGAACAATGGGTTC	GTAATAAACAAATC	+
FOXF2#MA0030.1	1	0.00251592	1.19758	0.214324	13	GGAAAAGAACAATGGGTTC	CAAACGTAAACAAT	+
Foxd3#MA0041.1	-2	0.00307459	1.46351	0.238583	12	GGAAAAGAACAATGGGTTC	AAACAAACATTC	-
STB3#MA0390.1	1	0.00330991	1.57552	0.238583	19	GGAAAAGAACAATGGGTTC	CCAGAGTGAAAAATTTTGGAC	-
slp1#MA0458.1	-1	0.00381958	1.81812	0.255654	11	GGAAAAGAACAATGGGTTC	AATGTAAACAA	-
MGA1#MA0336.1	3	0.00520795	2.47898	0.325343	18	GGAAAAGAACAATGGGTTC	AGGACTATAGAACACTCTAAA	+
SFL1#MA0377.1	3	0.0057476	2.73586	0.329311	18	GGAAAAGAACAATGGGTTC	TAGAGAATAGAAGAAATAAAA	+
FKH1#MA0296.1	2	0.00597433	2.84378	0.329311	18	GGAAAAGAACAATGGGTTC	TGAATTGTAAACAAAGAGGA	+
Pax4#MA0068.1	6	0.00685056	3.26087	0.356631	19	GGAAAAGAACAATGGGTTC	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-
SFP1#MA0378.1	-2	0.00806774	3.84024	0.397891	17	GGAAAAGAACAATGGGTTC	CCGTAGAAAATTTTTTTCAAT	-
pan#MA0237.1	-6	0.00867995	4.13166	0.40668	8	GGAAAAGAACAATGGGTTC	GATCAAAG	-
Sox2#MA0143.1	0	0.00954967	4.54565	0.406754	15	GGAAAAGAACAATGGGTTC	TTTGCATAACAAAGG	-
En1#MA0027.1	-4	0.0112053	5.33371	0.442521	11	GGAAAAGAACAATGGGTTC	GAACACTACTT	-
Ar#MA0007.1	-2	0.0121909	5.80287	0.442521	17	GGAAAAGAACAATGGGTTC	ATAAGAACACCCTGTACCCGCC	+
Foxa2#MA0047.1	-2	0.0122784	5.84452	0.442521	12	GGAAAAGAACAATGGGTTC	AAGTAAATATTG	-
Foxq1#MA0040.1	-3	0.0140057	6.6667	0.464685	11	GGAAAAGAACAATGGGTTC	AATAAACAATA	-
SPT23#MA0388.1	-4	0.0142139	6.76579	0.464685	8	GGAAAAGAACAATGGGTTC	GAAATCAA	+
br_Z3#MA0012.1	-5	0.0147962	7.04297	0.464685	11	GGAAAAGAACAATGGGTTC	TAAACTAAAAG	+
NFYA#MA0060.1	-3	0.0150679	7.17231	0.464685	16	GGAAAAGAACAATGGGTTC	CTCAGCCAATCAGCGC	+
NRG1#MA0347.1	0	0.0153729	7.31748	0.464685	19	GGAAAAGAACAATGGGTTC	TGCGATGGACCCTGATCTAG	-
NR3C1#MA0113.1	-4	0.017902	8.52137	0.511269	15	GGAAAAGAACAATGGGTTC	GGGAACATTATGTCCTAT	+
MATA1#MA0327.1	-6	0.0180052	8.57047	0.511269	7	GGAAAAGAACAATGGGTTC	ACACAAT	+
HMG-1#MA0044.1	-4	0.0187504	8.92521	0.516771	9	GGAAAAGAACAATGGGTTC	GAATACAAC	-