NonredundantMotifs:201

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant201
• db :SWISSREGULON
• Id :ALX1.p2
• name :ALX1
• score :0.04904433568073474
  
• External refs:

EntrezGene:ALX1
UniProt:ALX1

• Internal refs:

EntrezGene:ALX1

Motif matrix

PO A C G T 1 79.334802 30.187075 11.671023 39.11148 2 75.758951 39.804695 33.95761 10.783124 3 49.264106 46.809618 10.776781 53.453875 4 1.624345 0.749118 0 157.930917 5 136.373394 4.4525 5.369937 14.108549 6 158.727167 0 0 1.577213 7 1.508366 7.678933 0.690944 150.426137 8 0.695534 11.381705 13.351513 134.875628 9 88.004985 21.998116 16.720946 33.580333 10 47.758261 39.506319 24.613038 48.426762 11 31.136202 60.868109 7.840269 60.4598 12 145.395351 0.962932 10.806892 3.139205 13 0.692268 10.059374 1.564066 147.988672 14 9.51174 7.890105 0 142.902535 15 118.052898 3.531078 27.492738 11.227666 16 14.304979 27.682412 31.513372 86.803617 17 17.672332 66.136874 11.206336 65.288838 18 58.639634 21.05798 18.928821 61.677945