UBERON:0002241
From FANTOM5_SSTAR
| Name: | chondrocranium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Endoskeletal elements that encase the brain, nose, inner ear[cjm]. that part of the neurocranium formed by endochondral ossification and comprising the bones of the base of the skull[TFD]." Wikipedia:Chondrocranium | ||
| Xrefs: |
| ||
| Synonyms: |
"calvarium" RELATED [MA:0000317] "neurocranium" RELATED INCONSISTENT [MA:0000317] | ||
| Comments: | Editor/AO notes: we follow the standard evolutionary classification and treat this as endoskeletal. This means what MA calls 'chondrocranium' must in fact be neurocranium, as it includes parts of the dermatocranium (e.g. frontal, parietal). Taxon notes: covers the brain dorsally in chondrichthyans | ||
| Alt_id: | UBERON:FMA_76621-XAO_0003059-ZFA_0001424 | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0011159(primary subdivision of cranial skeletal system) |
|---|
Children
| part of: | UBERON:0002517 (basicranium),UBERON:0003112 (olfactory region) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002241 (chondrocranium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:106532542..106532545,-#_7be21ee4cecebfc9239d3416097b7c5a | p15@NUAK1 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:106532542..106532545,-#_7be21ee4cecebfc9239d3416097b7c5a | p15@NUAK1 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr16:77039159..77039160,-#_7be21ee4cecebfc9239d3416097b7c5a | p@chr16:77039159..77039160, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr16:77039159..77039160,-#_7be21ee4cecebfc9239d3416097b7c5a | p@chr16:77039159..77039160, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:46928841..46928843,-#_650e4799382366fcf950be7375363d6f | p@chr19:46928841..46928843, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:46928841..46928843,-#_650e4799382366fcf950be7375363d6f | p@chr19:46928841..46928843, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:62838269..62838272,-#_e1eaad143bf79d3102832024eb6b7676 | p@chr3:62838269..62838272, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:62838269..62838272,-#_e1eaad143bf79d3102832024eb6b7676 | p@chr3:62838269..62838272, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:79611322..79611329,+#_d9a5491fc6c54809f21233c8f79f0535 | p6@AB384875 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr22:20239738..20239751,-#_d9a5491fc6c54809f21233c8f79f0535 | p@chr22:20239738..20239751, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:79611322..79611329,+#_d9a5491fc6c54809f21233c8f79f0535 | p6@AB384875 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:87342674..87342684,+#_d9a5491fc6c54809f21233c8f79f0535 | p@chr9:87342674..87342684, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:133275558..133275575,+#_d9a5491fc6c54809f21233c8f79f0535 | p@chr6:133275558..133275575, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr22:20239738..20239751,-#_d9a5491fc6c54809f21233c8f79f0535 | p@chr22:20239738..20239751, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:133275558..133275575,+#_d9a5491fc6c54809f21233c8f79f0535 | p@chr6:133275558..133275575, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:87342674..87342684,+#_d9a5491fc6c54809f21233c8f79f0535 | p@chr9:87342674..87342684, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr5:94620792..94620803,-#_a60a990e58865afbce3f15769070c0fa | p@chr5:94620792..94620803, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:208443938..208443947,-#_a60a990e58865afbce3f15769070c0fa | p@chr1:208443938..208443947, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:83429564..83429567,-#_a60a990e58865afbce3f15769070c0fa | p@chr11:83429564..83429567, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:10375591..10375602,+#_a60a990e58865afbce3f15769070c0fa | p@chr12:10375591..10375602, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:83429564..83429567,-#_a60a990e58865afbce3f15769070c0fa | p@chr11:83429564..83429567, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:208443938..208443947,-#_a60a990e58865afbce3f15769070c0fa | p@chr1:208443938..208443947, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr9:10248507..10248511,-#_a60a990e58865afbce3f15769070c0fa | p@chr9:10248507..10248511, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr5:94620792..94620803,-#_a60a990e58865afbce3f15769070c0fa | p@chr5:94620792..94620803, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr9:10248507..10248511,-#_a60a990e58865afbce3f15769070c0fa | p@chr9:10248507..10248511, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:10375591..10375602,+#_a60a990e58865afbce3f15769070c0fa | p@chr12:10375591..10375602, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:46190162..46190170,-#_46ad831a8d389a1ef9d40447aaa48173 | p@chr6:46190162..46190170, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:46190162..46190170,-#_46ad831a8d389a1ef9d40447aaa48173 | p@chr6:46190162..46190170, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr4:8014649..8014653,-#_e01358b281c490af0422bf35c0fe3976 | p@chr4:8014649..8014653, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr15:52103928..52103940,+#_e01358b281c490af0422bf35c0fe3976 | p@chr15:52103928..52103940, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr15:52103928..52103940,+#_e01358b281c490af0422bf35c0fe3976 | p@chr15:52103928..52103940, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr4:8014649..8014653,-#_e01358b281c490af0422bf35c0fe3976 | p@chr4:8014649..8014653, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr1:160097523..160097534,+#_49fedb952333e7496e2f2223dcd0c9a0 | p20@ATP1A2 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr1:160097523..160097534,+#_49fedb952333e7496e2f2223dcd0c9a0 | p20@ATP1A2 |
| 3.3e-40 | FFCP PHASE1:Hg19::chr16:6729906..6729908,+#_f9cd70c8da2b812b542e5bf430c9c9af | p@chr16:6729906..6729908, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr2:17830681..17830687,+#_f9cd70c8da2b812b542e5bf430c9c9af | p@chr2:17830681..17830687, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr4:6437090..6437101,-#_f9cd70c8da2b812b542e5bf430c9c9af | p@chr4:6437090..6437101, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr16:6729906..6729908,+#_f9cd70c8da2b812b542e5bf430c9c9af | p@chr16:6729906..6729908, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr2:17830681..17830687,+#_f9cd70c8da2b812b542e5bf430c9c9af | p@chr2:17830681..17830687, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr4:6437090..6437101,-#_f9cd70c8da2b812b542e5bf430c9c9af | p@chr4:6437090..6437101, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr15:43814593..43814598,+#_ff27a10ca2e6dc15261c298a369eb891 | p36@MAP1A |
| 1.84e-34 | FFCP PHASE2:Hg19::chr7:130151176..130151185,+#_ff27a10ca2e6dc15261c298a369eb891 | p@chr7:130151176..130151185, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr1:75038668..75038679,-#_ff27a10ca2e6dc15261c298a369eb891 | p17@C1orf173 |
| 1.84e-34 | FFCP PHASE1:Hg19::chr15:43814593..43814598,+#_ff27a10ca2e6dc15261c298a369eb891 | p36@MAP1A |
| 1.84e-34 | FFCP PHASE1:Hg19::chr7:130151176..130151185,+#_ff27a10ca2e6dc15261c298a369eb891 | p@chr7:130151176..130151185, + |
| 1.84e-34 | FFCP PHASE2:Hg19::chr1:75038668..75038679,-#_ff27a10ca2e6dc15261c298a369eb891 | p17@C1orf173 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr9:114174370..114174381,-#_c0ea83195e46facf607e4e8b3e21160b | p@chr9:114174370..114174381, - |
| 2.58e-34 | FFCP PHASE1:Hg19::chr9:114174370..114174381,-#_c0ea83195e46facf607e4e8b3e21160b | p@chr9:114174370..114174381, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr1:154840487..154840496,-#_510d799a6d9e98203f3c1570a9cbf42e | p13@KCNN3 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr5:58148556..58148559,+#_510d799a6d9e98203f3c1570a9cbf42e | p@chr5:58148556..58148559, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr7:78131043..78131064,-#_510d799a6d9e98203f3c1570a9cbf42e | p@chr7:78131043..78131064, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr1:154840487..154840496,-#_510d799a6d9e98203f3c1570a9cbf42e | p13@KCNN3 |
| 3.61e-34 | FFCP PHASE2:Hg19::chr7:78131043..78131064,-#_510d799a6d9e98203f3c1570a9cbf42e | p@chr7:78131043..78131064, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr5:58148556..58148559,+#_510d799a6d9e98203f3c1570a9cbf42e | p@chr5:58148556..58148559, + |
| 5.05e-34 | FFCP PHASE1:Hg19::chr20:44688143..44688157,+#_855507624a5a2fca513a64ad7fe77985 | p@chr20:44688143..44688157, + |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:71666699..71666708,-#_855507624a5a2fca513a64ad7fe77985 | p12@B3GAT2 |
| 5.05e-34 | FFCP PHASE2:Hg19::chr2:86707340..86707351,+#_855507624a5a2fca513a64ad7fe77985 | p@chr2:86707340..86707351, + |
| 5.05e-34 | FFCP PHASE1:Hg19::chr4:120464080..120464091,+#_855507624a5a2fca513a64ad7fe77985 | p@chr4:120464080..120464091, + |
| 5.05e-34 | FFCP PHASE2:Hg19::chr20:44688143..44688157,+#_855507624a5a2fca513a64ad7fe77985 | p@chr20:44688143..44688157, + |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:71666699..71666708,-#_855507624a5a2fca513a64ad7fe77985 | p12@B3GAT2 |
| 5.05e-34 | FFCP PHASE2:Hg19::chr4:120464080..120464091,+#_855507624a5a2fca513a64ad7fe77985 | p@chr4:120464080..120464091, + |
| 5.05e-34 | FFCP PHASE1:Hg19::chr2:86707340..86707351,+#_855507624a5a2fca513a64ad7fe77985 | p@chr2:86707340..86707351, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr7:146192665..146192668,+#_3ce963163f955b0a2090889774e745eb | p@chr7:146192665..146192668, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr10:102089952..102089973,-#_3ce963163f955b0a2090889774e745eb | p2@PKD2L1 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr5:149613437..149613441,-#_3ce963163f955b0a2090889774e745eb | p@chr5:149613437..149613441, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr18:24434430..24434442,-#_3ce963163f955b0a2090889774e745eb | p15@AQP4 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr2:116499014..116499018,+#_3ce963163f955b0a2090889774e745eb | p@chr2:116499014..116499018, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr7:146192665..146192668,+#_3ce963163f955b0a2090889774e745eb | p@chr7:146192665..146192668, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr5:149613437..149613441,-#_3ce963163f955b0a2090889774e745eb | p@chr5:149613437..149613441, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr2:116499014..116499018,+#_3ce963163f955b0a2090889774e745eb | p@chr2:116499014..116499018, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr18:24434430..24434442,-#_3ce963163f955b0a2090889774e745eb | p15@AQP4 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr10:102089952..102089973,-#_3ce963163f955b0a2090889774e745eb | p2@PKD2L1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr8:133141199..133141206,-#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr8:133141199..133141206, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chr7:22391020..22391048,-#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr7:22391020..22391048, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chr14:93401419..93401433,+#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr14:93401419..93401433, + |
| 9.85e-34 | FFCP PHASE1:Hg19::chr14:93401419..93401433,+#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr14:93401419..93401433, + |
| 9.85e-34 | FFCP PHASE1:Hg19::chr2:55254526..55254550,-#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr2:55254526..55254550, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chr7:13141010..13141018,+#_3c945fe66a118ebeaf1e68e860e6f187 | p2@ENST00000443947 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr2:210560796..210560807,+#_3c945fe66a118ebeaf1e68e860e6f187 | p50@MAP2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr8:133141199..133141206,-#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr8:133141199..133141206, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chr7:22391020..22391048,-#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr7:22391020..22391048, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chr2:55254526..55254550,-#_3c945fe66a118ebeaf1e68e860e6f187 | p@chr2:55254526..55254550, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chr3:16926062..16926073,+#_3c945fe66a118ebeaf1e68e860e6f187 | p10@PLCL2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr7:13141010..13141018,+#_3c945fe66a118ebeaf1e68e860e6f187 | p2@ENST00000443947 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr2:210560796..210560807,+#_3c945fe66a118ebeaf1e68e860e6f187 | p50@MAP2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr3:16926062..16926073,+#_3c945fe66a118ebeaf1e68e860e6f187 | p10@PLCL2 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr4:21506086..21506087,-#_8de8dedc0389f5bb62a539111cd49d76 | p@chr4:21506086..21506087, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr4:21506086..21506087,-#_8de8dedc0389f5bb62a539111cd49d76 | p@chr4:21506086..21506087, - |
| 9.99e-30 | FFCP PHASE1:Hg19::chr2:2754109..2754121,-#_ca60245bda252d8d2902118149b2a72a | p@chr2:2754109..2754121, - |
| 9.99e-30 | FFCP PHASE1:Hg19::chr7:15014398..15014409,-#_ca60245bda252d8d2902118149b2a72a | p19@DGKB |
| 9.99e-30 | FFCP PHASE1:Hg19::chr17:1029026..1029035,-#_ca60245bda252d8d2902118149b2a72a | p37@ABR |
| 9.99e-30 | FFCP PHASE1:Hg19::chr11:133818054..133818066,-#_ca60245bda252d8d2902118149b2a72a | p@chr11:133818054..133818066, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr2:2754109..2754121,-#_ca60245bda252d8d2902118149b2a72a | p@chr2:2754109..2754121, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr17:1029026..1029035,-#_ca60245bda252d8d2902118149b2a72a | p37@ABR |
| 9.99e-30 | FFCP PHASE2:Hg19::chr7:15014398..15014409,-#_ca60245bda252d8d2902118149b2a72a | p19@DGKB |
| 9.99e-30 | FFCP PHASE2:Hg19::chr11:133818054..133818066,-#_ca60245bda252d8d2902118149b2a72a | p@chr11:133818054..133818066, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr4:88415540..88415543,-#_dbd0d117871a1c53fff531c6fca57263 | p@chr4:88415540..88415543, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr4:88415540..88415543,-#_dbd0d117871a1c53fff531c6fca57263 | p@chr4:88415540..88415543, - |
| 2.37e-29 | FFCP PHASE2:Hg19::chr19:10506556..10506567,-#_0f85aa71b215d01574a619278c18761c | p6@CDC37 |
| 2.37e-29 | FFCP PHASE2:Hg19::chr2:131769317..131769328,+#_0f85aa71b215d01574a619278c18761c | p13@ARHGEF4 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
