FFCP PHASE2:Hg19::chr6:152589466..152589487,-
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Short description: | p26@SYNE1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SYNE1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -160bp_to_ENST00000545694_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p26@SYNE1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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uterus or analog | 3.99e-50 | 1 |
embryonic uterus | 4.90e-21 | 22 |
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
uterus | 1.86e-10 | 21 |
internal female genitalia | 4.96e-10 | 22 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
internal genitalia | 5.95e-09 | 25 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |
Showing 1 to 6 of 6 entries