UBERON:0002114
From FANTOM5_SSTAR
| Name: | duodenum | |
|---|---|---|
| Definition: | "The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one)." [ISBN:0815318960, Wikipedia:Duodenum] | |
| Xrefs: |
| |
| Synonyms: |
"proximal intestine" RELATED [BTO:0000365] "upper intestine" RELATED [BTO:0000365] | |
| Comments: | This class was created automatically from a combination of ontologies | |
| Alt_id: | UBERON:FMA_7206-MA_0000338-MIAA_0000044-XAO_0000236 | |
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004921(subdivision of digestive tract) |
|---|---|
| part_of: | UBERON:0002108(small intestine) |
Children
| derives from: | FF:0010063 (human duodenum - fetal sample) |
|---|---|
| develops from: | UBERON:0003922 (pancreatic epithelial bud) |
| part of: | UBERON:0004914 (duodenal papilla),FF:0010063 (human duodenum - fetal sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10063-101H9 (temporal lobe, fetal, donor1)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002114 (duodenum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
