Personal tools

UBERON:0005175

From FANTOM5_SSTAR

Revision as of 11:14, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0005175 |name=chest organ |namespace= |def="An organ that is part of a chest [Obol]." [OBOL:automatic] |xref=MA:0000552 |is_a=UBERON:0005181 |synony...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:chest organ
Definition:"An organ that is part of a chest [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000552
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005181(thoracic segment organ)
part_of:UBERON:0001443(chest)



Children

is a:UBERON:0002426 (chest muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005175 (chest organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_f843bf2ddc9f21b1dbc7c3d4eb228d97p@chr18:10458574..10458579, -
5.42e-195FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_f843bf2ddc9f21b1dbc7c3d4eb228d97p@chr18:10458574..10458579, -
2.55e-98FFCP PHASE2:Hg19::chr8:115584851..115584862,+#_bfe9a414034f2e598bc17d0de7e994acp@chr8:115584851..115584862, +
2.55e-98FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE1:Hg19::chr8:115584851..115584862,+#_bfe9a414034f2e598bc17d0de7e994acp@chr8:115584851..115584862, +
2.55e-98FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP9-8
2.55e-98FFCP PHASE2:Hg19::chr17:10428881..10428898,+#_bfe9a414034f2e598bc17d0de7e994acp@chr17:10428881..10428898, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065647..223065654,+#_bfe9a414034f2e598bc17d0de7e994acp@chr1:223065647..223065654, +
2.55e-98FFCP PHASE2:Hg19::chr9:101832711..101832718,+#_bfe9a414034f2e598bc17d0de7e994acp@chr9:101832711..101832718, +
2.55e-98FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP4-5
2.55e-98FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP9-8
2.55e-98FFCP PHASE1:Hg19::chr17:10428881..10428898,+#_bfe9a414034f2e598bc17d0de7e994acp@chr17:10428881..10428898, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065647..223065654,+#_bfe9a414034f2e598bc17d0de7e994acp@chr1:223065647..223065654, +
2.55e-98FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP4-5
2.55e-98FFCP PHASE2:Hg19::chr20:31571662..31571664,+#_bfe9a414034f2e598bc17d0de7e994acp@chr20:31571662..31571664, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065664..223065673,+#_bfe9a414034f2e598bc17d0de7e994acp@chr1:223065664..223065673, +
2.55e-98FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP4-3
2.55e-98FFCP PHASE1:Hg19::chr9:101832711..101832718,+#_bfe9a414034f2e598bc17d0de7e994acp@chr9:101832711..101832718, +
2.55e-98FFCP PHASE1:Hg19::chr20:31571662..31571664,+#_bfe9a414034f2e598bc17d0de7e994acp@chr20:31571662..31571664, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065664..223065673,+#_bfe9a414034f2e598bc17d0de7e994acp@chr1:223065664..223065673, +
2.55e-98FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP4-3
2.55e-98FFCP PHASE2:Hg19::chr3:112929906..112929910,+#_bfe9a414034f2e598bc17d0de7e994acp13@BOC
2.55e-98FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP4-2
2.55e-98FFCP PHASE1:Hg19::chr3:112929906..112929910,+#_bfe9a414034f2e598bc17d0de7e994acp13@BOC
2.55e-98FFCP PHASE1:Hg19::chr11:64518023..64518030,-#_bfe9a414034f2e598bc17d0de7e994acp19@PYGM
2.55e-98FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP4-2
2.55e-98FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_bfe9a414034f2e598bc17d0de7e994acp1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE2:Hg19::chr11:64518023..64518030,-#_bfe9a414034f2e598bc17d0de7e994acp19@PYGM
1.23e-66FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_64948d520dd4c238a58549b48922106cp@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_64948d520dd4c238a58549b48922106cp@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_64948d520dd4c238a58549b48922106cp@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr11:126077478..126077485,-#_64948d520dd4c238a58549b48922106cp4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr11:126077478..126077485,-#_64948d520dd4c238a58549b48922106cp4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr10:75226166..75226169,-#_64948d520dd4c238a58549b48922106cp6@PPP3CB
1.23e-66FFCP PHASE2:Hg19::chr10:75226166..75226169,-#_64948d520dd4c238a58549b48922106cp6@PPP3CB
1.23e-66FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_64948d520dd4c238a58549b48922106cp@chr19:50994855..50994864, -
2.39e-66FFCP PHASE2:Hg19::chr2:26700872..26700884,-#_6150f9575b3f1c83016d1a666ffb8a9fp5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr17:10533450..10533457,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr17:10533450..10533457, +
2.39e-66FFCP PHASE1:Hg19::chr7:123241760..123241766,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr7:123241760..123241766, -
2.39e-66FFCP PHASE1:Hg19::chr2:26700872..26700884,-#_6150f9575b3f1c83016d1a666ffb8a9fp5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr14:97684658..97684662,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr17:10533450..10533457,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr17:10533450..10533457, +
2.39e-66FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr2:179588230..179588237, -
2.39e-66FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr10:99343436..99343448, +
2.39e-66FFCP PHASE1:Hg19::chr14:97684658..97684662,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr10:24407264..24407270,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr10:99343436..99343448, +
2.39e-66FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_6150f9575b3f1c83016d1a666ffb8a9fp23@TNNT3
2.39e-66FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr2:179548750..179548755, -
2.39e-66FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr2:179588230..179588237, -
2.39e-66FFCP PHASE2:Hg19::chr10:24407264..24407270,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_6150f9575b3f1c83016d1a666ffb8a9fp47@RBPJ
2.39e-66FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr2:179542420..179542428, -
2.39e-66FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_6150f9575b3f1c83016d1a666ffb8a9fp23@TNNT3
2.39e-66FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr2:179548750..179548755, -
2.39e-66FFCP PHASE2:Hg19::chr5:7727283..7727284,+#_6150f9575b3f1c83016d1a666ffb8a9fp19@ADCY2
2.39e-66FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr2:179542420..179542428, -
2.39e-66FFCP PHASE1:Hg19::chr5:7727283..7727284,+#_6150f9575b3f1c83016d1a666ffb8a9fp19@ADCY2
2.39e-66FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_6150f9575b3f1c83016d1a666ffb8a9fp3@PGPEP1L
2.39e-66FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr19:50997736..50997745, -
2.39e-66FFCP PHASE2:Hg19::chr12:68185216..68185218,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr12:68185216..68185218, +
2.39e-66FFCP PHASE2:Hg19::chr7:123241760..123241766,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr7:123241760..123241766, -
2.39e-66FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_6150f9575b3f1c83016d1a666ffb8a9fp3@PGPEP1L
2.39e-66FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_6150f9575b3f1c83016d1a666ffb8a9fp47@RBPJ
2.39e-66FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_6150f9575b3f1c83016d1a666ffb8a9fp@chr19:50997736..50997745, -
2.39e-66FFCP PHASE1:Hg19::chr12:68185216..68185218,+#_6150f9575b3f1c83016d1a666ffb8a9fp@chr12:68185216..68185218, +
4.66e-66FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_e329c94e295b1bac21eb48ef02bbf81ep34@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_e329c94e295b1bac21eb48ef02bbf81ep28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152342364..152342373, -
4.66e-66FFCP PHASE2:Hg19::chr17:10544511..10544520,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152393686..152393693, -
4.66e-66FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr17:10544511..10544520,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr17:39507076..39507080,-#_e329c94e295b1bac21eb48ef02bbf81ep1@KRT33A
4.66e-66FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152393686..152393693, -
4.66e-66FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152514527..152514536, -
4.66e-66FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr17:39507076..39507080,-#_e329c94e295b1bac21eb48ef02bbf81ep1@KRT33A
4.66e-66FFCP PHASE2:Hg19::chr17:38911580..38911584,-#_e329c94e295b1bac21eb48ef02bbf81ep1@KRT25
4.66e-66FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152514527..152514536, -
4.66e-66FFCP PHASE2:Hg19::chr12:52695617..52695623,+#_e329c94e295b1bac21eb48ef02bbf81ep4@KRT86
4.66e-66FFCP PHASE2:Hg19::chr8:82373809..82373815,-#_e329c94e295b1bac21eb48ef02bbf81ep1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr12:52695617..52695623,+#_e329c94e295b1bac21eb48ef02bbf81ep4@KRT86
4.66e-66FFCP PHASE1:Hg19::chr17:38911580..38911584,-#_e329c94e295b1bac21eb48ef02bbf81ep1@KRT25
4.66e-66FFCP PHASE2:Hg19::chr13:28961100..28961122,-#_e329c94e295b1bac21eb48ef02bbf81ep14@FLT1
4.66e-66FFCP PHASE2:Hg19::chr17:38938796..38938803,-#_e329c94e295b1bac21eb48ef02bbf81ep1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152419209..152419216, -
4.66e-66FFCP PHASE1:Hg19::chr13:28961100..28961122,-#_e329c94e295b1bac21eb48ef02bbf81ep14@FLT1
4.66e-66FFCP PHASE1:Hg19::chr17:38938796..38938803,-#_e329c94e295b1bac21eb48ef02bbf81ep1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_e329c94e295b1bac21eb48ef02bbf81ep34@XIRP2
4.66e-66FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_e329c94e295b1bac21eb48ef02bbf81ep28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr8:82373809..82373815,-#_e329c94e295b1bac21eb48ef02bbf81ep1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152419209..152419216, -
4.66e-66FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_e329c94e295b1bac21eb48ef02bbf81ep@chr2:152342364..152342373, -
1.46e-50FFCP PHASE1:Hg19::chr1:236861252..236861256,+#_50e67e7abcf0abfbd9348fe6c2884b62p@chr1:236861252..236861256, +
1.46e-50FFCP PHASE1:Hg19::chr15:99548808..99548813,-#_50e67e7abcf0abfbd9348fe6c2884b62p6@PGPEP1L
1.46e-50FFCP PHASE1:Hg19::chr2:152520289..152520294,-#_50e67e7abcf0abfbd9348fe6c2884b62p@chr2:152520289..152520294, -
1.46e-50FFCP PHASE1:Hg19::chr10:35104131..35104138,-#_50e67e7abcf0abfbd9348fe6c2884b62p4@PARD3
1.46e-50FFCP PHASE2:Hg19::chr10:35104131..35104138,-#_50e67e7abcf0abfbd9348fe6c2884b62p4@PARD3
1.46e-50FFCP PHASE2:Hg19::chr22:32647133..32647135,-#_50e67e7abcf0abfbd9348fe6c2884b62p@chr22:32647133..32647135, -