UBERON:0007811
From FANTOM5_SSTAR
Name: | craniocervical region | |
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Definition: | "The anteriormost subdivision of the body that includes the head and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [UBERON:cjm] | |
Xrefs: |
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Synonyms: |
"head and neck" EXACT [FMA:280881] "head or neck" RELATED [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000475(organism subdivision) |
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part_of: | UBERON:0000153(anterior region of body) |
Children
derives from: | FF:0102709 (head and neck squamous cell carcinoma cell line sample) |
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part of: | UBERON:0000033 (head),UBERON:0000974 (neck),UBERON:0007914 (head or neck bone),UBERON:0008229 (craniocervical region musculature),UBERON:0010959 (craniocervical muscle) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10061-101H7 (throat, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10195-103E6 (olfactory region, adult)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10209-103G2 (throat, adult)
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10061-101H7 (throat, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10195-103E6 (olfactory region, adult)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10209-103G2 (throat, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007811 (craniocervical region), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data