CL:0000138
From FANTOM5_SSTAR
Name: | chondrocyte | |
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Namespace: | cell | |
Definition: | "Polymorphic cell that form cartilage." [MESH:A.11.329.171] | |
Xrefs: |
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Synonyms: | "cartilage cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000153(GAG secreting cell),CL:0000667(collagen secreting cell) |
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develops_from: | CL:0000058(chondroblast) |
Children
derives from: | FF:0000037 (human chondrocyte sample),FF:0101574 (chondrosarcoma cell line sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10700-109G7 (chondrosarcoma cell line:SW 1353)
- 10720-109I9
- 10767-110F2
- 11261-116G1 (Chondrocyte - de diff, donor1)
- 11262-116G2
- 11338-117F6 (Chondrocyte - de diff, donor2)
- 11339-117F7 (Chondrocyte - re diff, donor2)
- 11410-118E6 (Chondrocyte - de diff, donor3)
- 11411-118E7 (Chondrocyte - re diff, donor3)
Mouse (Mus musculus)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10700-109G7 (chondrosarcoma cell line:SW 1353)
- 10720-109I9
- 10767-110F2
- 11261-116G1 (Chondrocyte - de diff, donor1)
- 11262-116G2
- 11338-117F6 (Chondrocyte - de diff, donor2)
- 11339-117F7 (Chondrocyte - re diff, donor2)
- 11410-118E6 (Chondrocyte - de diff, donor3)
- 11411-118E7 (Chondrocyte - re diff, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000138 (chondrocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data