CL:0000234

Name:	phagocyte
Namespace:	FANTOM
Definition:	"Any cell capable of ingesting particulate matter via phagocytosis." [GOC:add, ISBN:0721601464]
Xrefs:	Expandlinks: BTO:0001044 FMA:83806

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000219(motile cell),CL:0000325(stuff accumulating cell),CL:0000473(defensive cell)

Children

is a:	CL:0000235 (macrophage),CL:0000860 (classical monocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11232-116C8 (Macrophage - monocyte derived, donor1)
• 11313-117C8 (Macrophage - monocyte derived, donor2)
• 11389-118C3 (Macrophage - monocyte derived, donor3)
• 11501-119F7
• 11641-122D3 (Mouse Microglia, donor3)
• 11662-122F6
• 11718-123C8 (Mouse Microglia, donor1)
• 11736-123E8 (Mouse Microglia, donor2)
• 11788-124B6 (CD14+CD16- Monocytes, donor1)
• 11799-124C8 (CD14+CD16- Monocytes, donor2)

... further results Mouse (Mus musculus)

• 11232-116C8 (Macrophage - monocyte derived, donor1)
• 11313-117C8 (Macrophage - monocyte derived, donor2)
• 11389-118C3 (Macrophage - monocyte derived, donor3)
• 11501-119F7
• 11641-122D3 (Mouse Microglia, donor3)
• 11662-122F6
• 11718-123C8 (Mouse Microglia, donor1)
• 11736-123E8 (Mouse Microglia, donor2)
• 11788-124B6 (CD14+CD16- Monocytes, donor1)
• 11799-124C8 (CD14+CD16- Monocytes, donor2)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000234 (phagocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
3.0e-160	FFCP PHASE2:Hg19::chrX:37664331..37664352,+	p@chrX:37664331..37664352, +
3.0e-160	FFCP PHASE1:Hg19::chrX:37664331..37664352,+	p@chrX:37664331..37664352, +
1.12e-152	FFCP PHASE1:Hg19::chr17:72606825..72606838,-	p@chr17:72606825..72606838, -
1.12e-152	FFCP PHASE2:Hg19::chr17:72606825..72606838,-	p@chr17:72606825..72606838, -
4.58e-152	FFCP PHASE1:Hg19::chr11:58979924..58979941,-	p4@MPEG1
4.58e-152	FFCP PHASE2:Hg19::chr11:58979924..58979941,-	p4@MPEG1
5.71e-152	FFCP PHASE1:Hg19::chr8:71452856..71452863,+	p@chr8:71452856..71452863, +
5.71e-152	FFCP PHASE2:Hg19::chr8:71452856..71452863,+	p@chr8:71452856..71452863, +
2.22e-151	FFCP PHASE1:Hg19::chr17:72607351..72607373,-	p@chr17:72607351..72607373, -
2.22e-151	FFCP PHASE2:Hg19::chr17:72607351..72607373,-	p@chr17:72607351..72607373, -
2.51e-151	FFCP PHASE2:Hg19::chr19:55208119..55208134,+	p1@LILRP1
2.51e-151	FFCP PHASE1:Hg19::chr19:55208119..55208134,+	p1@LILRP1
6.02e-151	FFCP PHASE1:Hg19::chr4:185314351..185314392,+	p@chr4:185314351..185314392, +
6.02e-151	FFCP PHASE2:Hg19::chr4:185314351..185314392,+	p@chr4:185314351..185314392, +
1.13e-150	FFCP PHASE1:Hg19::chr7:44661060..44661101,-	p@chr7:44661060..44661101, -
1.13e-150	FFCP PHASE2:Hg19::chr7:44661060..44661101,-	p@chr7:44661060..44661101, -
2.0e-150	FFCP PHASE1:Hg19::chr17:72628050..72628077,-	p@chr17:72628050..72628077, -
2.0e-150	FFCP PHASE2:Hg19::chr17:72628050..72628077,-	p@chr17:72628050..72628077, -
9.24e-150	FFCP PHASE1:Hg19::chr14:55249943..55249971,+	p@chr14:55249943..55249971, +
9.24e-150	FFCP PHASE2:Hg19::chr14:55249943..55249971,+	p@chr14:55249943..55249971, +
1.2e-149	FFCP PHASE2:Hg19::chr7:151503418..151503445,+	p1@ENST00000481153
1.2e-149	FFCP PHASE1:Hg19::chr7:151503418..151503445,+	p1@ENST00000481153
5.67e-149	FFCP PHASE2:Hg19::chr17:72607002..72607029,+	p@chr17:72607002..72607029, +
5.67e-149	FFCP PHASE1:Hg19::chr17:72607002..72607029,+	p@chr17:72607002..72607029, +
6.94e-148	FFCP PHASE1:Hg19::chr17:7482481..7482508,-	p@chr17:7482481..7482508, -
6.94e-148	FFCP PHASE2:Hg19::chr17:7482481..7482508,-	p@chr17:7482481..7482508, -
1.27e-147	FFCP PHASE2:Hg19::chr8:11755021..11755054,+	p@chr8:11755021..11755054, +
1.27e-147	FFCP PHASE1:Hg19::chr8:11755021..11755054,+	p@chr8:11755021..11755054, +
1.17e-146	FFCP PHASE1:Hg19::chr3:128943968..128943986,+	p@chr3:128943968..128943986, +
1.17e-146	FFCP PHASE2:Hg19::chr3:128943968..128943986,+	p@chr3:128943968..128943986, +
1.84e-146	FFCP PHASE1:Hg19::chr2:143623608..143623622,-	p@chr2:143623608..143623622, -
1.84e-146	FFCP PHASE2:Hg19::chr2:143623608..143623622,-	p@chr2:143623608..143623622, -
8.93e-146	FFCP PHASE1:Hg19::chr19:51625943..51625962,+	p@chr19:51625943..51625962, +
8.93e-146	FFCP PHASE2:Hg19::chr19:51625943..51625962,+	p@chr19:51625943..51625962, +
1.23e-145	FFCP PHASE1:Hg19::chr1:161188746..161188758,+	p@chr1:161188746..161188758, +
1.23e-145	FFCP PHASE2:Hg19::chr1:161188746..161188758,+	p@chr1:161188746..161188758, +
2.49e-145	FFCP PHASE1:Hg19::chr19:51625924..51625942,+	p@chr19:51625924..51625942, +
2.49e-145	FFCP PHASE2:Hg19::chr19:51625924..51625942,+	p@chr19:51625924..51625942, +
2.76e-145	FFCP PHASE1:Hg19::chr1:111182849..111182891,+	p@chr1:111182849..111182891, +
2.76e-145	FFCP PHASE2:Hg19::chr1:111182849..111182891,+	p@chr1:111182849..111182891, +
4.97e-145	FFCP PHASE2:Hg19::chr17:72607152..72607174,-	p@chr17:72607152..72607174, -
4.97e-145	FFCP PHASE1:Hg19::chr17:72607152..72607174,-	p@chr17:72607152..72607174, -
5.74e-145	FFCP PHASE1:Hg19::chr7:77050554..77050601,+	p@chr7:77050554..77050601, +
5.74e-145	FFCP PHASE2:Hg19::chr7:77050554..77050601,+	p@chr7:77050554..77050601, +
8.55e-145	FFCP PHASE2:Hg19::chr2:145276939..145276960,+	p2@ZEB2-AS1
8.55e-145	FFCP PHASE1:Hg19::chr2:145276939..145276960,+	p2@ZEB2-AS1
9.86e-145	FFCP PHASE2:Hg19::chr11:68847043..68847057,+	p@chr11:68847043..68847057, +
9.86e-145	FFCP PHASE1:Hg19::chr11:68847043..68847057,+	p@chr11:68847043..68847057, +
1.43e-144	FFCP PHASE1:Hg19::chr1:161188661..161188679,+	p@chr1:161188661..161188679, +
1.43e-144	FFCP PHASE2:Hg19::chr1:161188661..161188679,+	p@chr1:161188661..161188679, +
1.93e-144	FFCP PHASE1:Hg19::chr5:131280548..131280574,-	p1@ENST00000425320
1.93e-144	FFCP PHASE2:Hg19::chr5:131280548..131280574,-	p1@ENST00000425320
5.05e-144	FFCP PHASE1:Hg19::chr19:18288651..18288682,+	p5@IFI30
5.05e-144	FFCP PHASE2:Hg19::chr19:18288651..18288682,+	p5@IFI30
2.75e-143	FFCP PHASE2:Hg19::chr1:120593738..120593745,+	p@chr1:120593738..120593745, +
2.75e-143	FFCP PHASE1:Hg19::chr1:120593738..120593745,+	p@chr1:120593738..120593745, +
3.2e-143	FFCP PHASE2:Hg19::chr1:27943424..27943442,-	p@chr1:27943424..27943442, -
3.2e-143	FFCP PHASE1:Hg19::chr1:27943424..27943442,-	p@chr1:27943424..27943442, -
5.48e-143	FFCP PHASE1:Hg19::chr7:48009999..48010016,+	p@chr7:48009999..48010016, +
5.48e-143	FFCP PHASE2:Hg19::chr7:48009999..48010016,+	p@chr7:48009999..48010016, +
9.17e-143	FFCP PHASE2:Hg19::chr16:82229835..82229848,+	p@chr16:82229835..82229848, +
9.17e-143	FFCP PHASE1:Hg19::chr16:82229835..82229848,+	p@chr16:82229835..82229848, +
2.09e-142	FFCP PHASE2:Hg19::chr2:129283966..129283970,+	p@chr2:129283966..129283970, +
2.09e-142	FFCP PHASE1:Hg19::chr2:129283966..129283970,+	p@chr2:129283966..129283970, +
2.81e-142	FFCP PHASE2:Hg19::chr15:59469817..59469836,+	p@chr15:59469817..59469836, +
2.81e-142	FFCP PHASE1:Hg19::chr15:59469817..59469836,+	p@chr15:59469817..59469836, +
3.09e-142	FFCP PHASE1:Hg19::chr2:145429606..145429658,+	p@chr2:145429606..145429658, +
3.09e-142	FFCP PHASE2:Hg19::chr2:145429606..145429658,+	p@chr2:145429606..145429658, +
3.6e-142	FFCP PHASE2:Hg19::chr10:73648356..73648408,-	p@chr10:73648356..73648408, -
3.6e-142	FFCP PHASE1:Hg19::chr10:73648356..73648408,-	p@chr10:73648356..73648408, -
4.15e-142	FFCP PHASE2:Hg19::chr4:159731607..159731627,+	p@chr4:159731607..159731627, +
4.15e-142	FFCP PHASE1:Hg19::chr4:159731607..159731627,+	p@chr4:159731607..159731627, +
9.43e-142	FFCP PHASE1:Hg19::chr8:11754835..11754867,-	p1@ENST00000525252
9.43e-142	FFCP PHASE2:Hg19::chr8:11754835..11754867,-	p1@ENST00000525252
1.12e-141	FFCP PHASE1:Hg19::chr20:2191870..2191909,-	p@chr20:2191870..2191909, -
1.12e-141	FFCP PHASE2:Hg19::chr20:2191870..2191909,-	p@chr20:2191870..2191909, -
1.17e-141	FFCP PHASE1:Hg19::chr1:161188022..161188042,+	p@chr1:161188022..161188042, +
1.17e-141	FFCP PHASE2:Hg19::chr1:161188022..161188042,+	p@chr1:161188022..161188042, +
3.2e-141	FFCP PHASE1:Hg19::chr17:72606678..72606702,-	p@chr17:72606678..72606702, -
3.2e-141	FFCP PHASE2:Hg19::chr17:72606678..72606702,-	p@chr17:72606678..72606702, -
3.49e-141	FFCP PHASE1:Hg19::chr22:17717917..17717939,-	p@chr22:17717917..17717939, -
3.49e-141	FFCP PHASE2:Hg19::chr22:17717917..17717939,-	p@chr22:17717917..17717939, -
4.64e-141	FFCP PHASE2:Hg19::chr6:46698996..46699019,+	p@chr6:46698996..46699019, +
4.64e-141	FFCP PHASE1:Hg19::chr6:46698996..46699019,+	p@chr6:46698996..46699019, +
5.93e-141	FFCP PHASE2:Hg19::chr2:143623546..143623573,-	p@chr2:143623546..143623573, -
5.93e-141	FFCP PHASE1:Hg19::chr2:143623546..143623573,-	p@chr2:143623546..143623573, -
6.3e-141	FFCP PHASE2:Hg19::chr12:125197870..125197907,+	p@chr12:125197870..125197907, +
6.3e-141	FFCP PHASE1:Hg19::chr12:125197870..125197907,+	p@chr12:125197870..125197907, +
6.36e-141	FFCP PHASE2:Hg19::chr20:2191845..2191866,-	p@chr20:2191845..2191866, -
6.36e-141	FFCP PHASE1:Hg19::chr20:2191845..2191866,-	p@chr20:2191845..2191866, -
6.5e-141	FFCP PHASE2:Hg19::chr2:38358217..38358244,+	p1@CYP1B1-AS1
6.5e-141	FFCP PHASE1:Hg19::chr2:38358217..38358244,+	p1@CYP1B1-AS1
7.62e-141	FFCP PHASE1:Hg19::chr5:156534439..156534470,+	p@chr5:156534439..156534470, +
7.62e-141	FFCP PHASE2:Hg19::chr5:156534439..156534470,+	p@chr5:156534439..156534470, +
1.24e-140	FFCP PHASE1:Hg19::chr2:145421047..145421067,+	p@chr2:145421047..145421067, +
1.24e-140	FFCP PHASE2:Hg19::chr2:145421047..145421067,+	p@chr2:145421047..145421067, +
1.97e-140	FFCP PHASE1:Hg19::chr9:137300477..137300490,+	p@chr9:137300477..137300490, +
1.97e-140	FFCP PHASE2:Hg19::chr9:137300477..137300490,+	p@chr9:137300477..137300490, +
3.85e-140	FFCP PHASE2:Hg19::chr10:106006943..106006961,+	p@chr10:106006943..106006961, +
3.85e-140	FFCP PHASE1:Hg19::chr10:106006943..106006961,+	p@chr10:106006943..106006961, +

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