CL:0000809
From FANTOM5_SSTAR
Name: | double-positive, alpha-beta thymocyte |
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Namespace: | FANTOM |
Definition: | "A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors." [GO_REF:0000031, GOC:add, GOC:tfm, ISBN:0781735149] |
Synonyms: |
"double-positive, alpha-beta immature T lymphocyte" EXACT [] "DP cell" EXACT [] "DP thymocyte" EXACT [] |
Comments: | Thymocytes of this stage are undergoing positive and negative selection. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000790(immature alpha-beta T cell),CL:0000893(thymocyte) |
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develops_from: | CL:0000805(immature single positive thymocyte) |
part_of: | UBERON:0002370(thymus) |
Children
is a: | CL:0002427 (resting double-positive thymocyte),CL:0002428 (double-positive blast),CL:0002429 (CD69-positive double-positive thymocyte),CL:0002431 (CD4-positive, CD8-intermediate double-positive thymocyte) |
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develops from: | CL:0000810 (CD4-positive, alpha-beta thymocyte),CL:0000914 (immature NK T cell),CL:0002039 (immature NK T cell stage I) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000809 (double-positive, alpha-beta thymocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data