CL:0000875
From FANTOM5_SSTAR
| Name: | non-classical monocyte |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "Subset of monocytes characterized by low expression of CCR2, low responsiveness to monocyte chemoattractant CCL2/MCP1, low phagocytic activity, but increased co-stimulatory activity. May also play a role in tissue repair." [GO_REF:0000031, PMID:16322748, PMID:18303997, PMID:20628149, PMID:20870168] |
| Synonyms: |
"patrolling monocyte" EXACT [] "resident monocyte" EXACT [] |
| Comments: | Markers: CCR2-CX3CCR1+ (human, mouse, rat); human: CD16+, CCR5+, CD32/FcgRII-high, MHCII+, CD86+; mouse: CD62L-Ly6C-. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000576(monocyte) |
|---|
Children
| is a: | CL:0002396 (CD14-low, CD16-positive monocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11790-124B8 (CD14-CD16+ Monocytes, donor1)
- 11800-124C9 (CD14-CD16+ Monocytes, donor2)
- 11911-125G3 (CD14-CD16+ Monocytes, donor3)
Mouse (Mus musculus)
- 11790-124B8 (CD14-CD16+ Monocytes, donor1)
- 11800-124C9 (CD14-CD16+ Monocytes, donor2)
- 11911-125G3 (CD14-CD16+ Monocytes, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000875 (non-classical monocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.27e-147 | FFCP PHASE1:Hg19::chr8:144480343..144480350,-#_10f4afad32065d713da8df9482fc9195 | p@chr8:144480343..144480350, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr8:144480343..144480350,-#_10f4afad32065d713da8df9482fc9195 | p@chr8:144480343..144480350, - |
| 1.47e-146 | FFCP PHASE1:Hg19::chr15:22550731..22550738,+#_a7f5665d1ef30583f4388abe2936ff7d | p@chr15:22550731..22550738, + |
| 1.47e-146 | FFCP PHASE2:Hg19::chr15:22550731..22550738,+#_a7f5665d1ef30583f4388abe2936ff7d | p@chr15:22550731..22550738, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr10:43609342..43609351,+#_26a9739a0c15b051bf11b7797845a2aa | p@chr10:43609342..43609351, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr15:22538560..22538601,-#_26a9739a0c15b051bf11b7797845a2aa | p@chr15:22538560..22538601, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr10:43609342..43609351,+#_26a9739a0c15b051bf11b7797845a2aa | p@chr10:43609342..43609351, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr15:22538560..22538601,-#_26a9739a0c15b051bf11b7797845a2aa | p@chr15:22538560..22538601, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr15:22550782..22550787,+#_37f94897377b168045cb3ce25502f215 | p@chr15:22550782..22550787, + |
| 7.78e-118 | FFCP PHASE1:Hg19::chr15:22550782..22550787,+#_37f94897377b168045cb3ce25502f215 | p@chr15:22550782..22550787, + |
| 1.16e-117 | FFCP PHASE2:Hg19::chr7:101923267..101923278,+#_ba60fb76f89154a5e39d04bc84707d1f | p@chr7:101923267..101923278, + |
| 1.16e-117 | FFCP PHASE1:Hg19::chr7:101923267..101923278,+#_ba60fb76f89154a5e39d04bc84707d1f | p@chr7:101923267..101923278, + |
| 4.06e-99 | FFCP PHASE1:Hg19::chr10:115070193..115070207,-#_4fcc963540346e3c4a0b6b2eb4cf23f4 | p@chr10:115070193..115070207, - |
| 4.06e-99 | FFCP PHASE2:Hg19::chr10:115070193..115070207,-#_4fcc963540346e3c4a0b6b2eb4cf23f4 | p@chr10:115070193..115070207, - |
| 4.06e-99 | FFCP PHASE2:Hg19::chr1:161519682..161519691,-#_4fcc963540346e3c4a0b6b2eb4cf23f4 | p7@FCGR3A |
| 4.06e-99 | FFCP PHASE1:Hg19::chr1:161519682..161519691,-#_4fcc963540346e3c4a0b6b2eb4cf23f4 | p7@FCGR3A |
| 2.17e-98 | FFCP PHASE1:Hg19::chr15:22550810..22550816,+#_7ec7885e1be75087daf1c0a1eacad79e | p@chr15:22550810..22550816, + |
| 2.17e-98 | FFCP PHASE2:Hg19::chr15:22550810..22550816,+#_7ec7885e1be75087daf1c0a1eacad79e | p@chr15:22550810..22550816, + |
| 3.03e-98 | FFCP PHASE1:Hg19::chr10:134234820..134234825,+#_bf368cb0794b10a82988bc71491e27fd | p@chr10:134234820..134234825, + |
| 3.03e-98 | FFCP PHASE2:Hg19::chr10:134234820..134234825,+#_bf368cb0794b10a82988bc71491e27fd | p@chr10:134234820..134234825, + |
| 3.03e-98 | FFCP PHASE2:Hg19::chr17:40351201..40351230,+#_bf368cb0794b10a82988bc71491e27fd | p@chr17:40351201..40351230, + |
| 3.03e-98 | FFCP PHASE1:Hg19::chr17:40351201..40351230,+#_bf368cb0794b10a82988bc71491e27fd | p@chr17:40351201..40351230, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr7:20581331..20581339,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr7:20581331..20581339, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr7:20581377..20581387,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr7:20581377..20581387, - |
| 2.28e-85 | FFCP PHASE1:Hg19::chr15:22550722..22550726,+#_6640db1e0f300a83e7e2460829f91fd7 | p@chr15:22550722..22550726, + |
| 2.28e-85 | FFCP PHASE2:Hg19::chr7:155055063..155055078,+#_6640db1e0f300a83e7e2460829f91fd7 | p@chr7:155055063..155055078, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr7:20581377..20581387,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr7:20581377..20581387, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr15:22550722..22550726,+#_6640db1e0f300a83e7e2460829f91fd7 | p@chr15:22550722..22550726, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr7:155055063..155055078,+#_6640db1e0f300a83e7e2460829f91fd7 | p@chr7:155055063..155055078, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr12:29727591..29727616,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr12:29727591..29727616, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr17:47287786..47287800,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr17:47287786..47287800, - |
| 2.28e-85 | FFCP PHASE1:Hg19::chr17:47287786..47287800,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr17:47287786..47287800, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr7:20581331..20581339,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr7:20581331..20581339, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr12:29727591..29727616,-#_6640db1e0f300a83e7e2460829f91fd7 | p@chr12:29727591..29727616, - |
| 3.04e-85 | FFCP PHASE1:Hg19::chr16:1538765..1538796,-#_f978a64d323c9a23f82e1d9c2c5b2b6f | p1@PTX4 |
| 3.04e-85 | FFCP PHASE2:Hg19::chr16:1538765..1538796,-#_f978a64d323c9a23f82e1d9c2c5b2b6f | p1@PTX4 |
| 4.06e-85 | FFCP PHASE1:Hg19::chr15:75080883..75080890,+#_c28fa51f3c91aaab957447e4efe7d391 | p14@CSK |
| 4.06e-85 | FFCP PHASE2:Hg19::chr15:75080883..75080890,+#_c28fa51f3c91aaab957447e4efe7d391 | p14@CSK |
| 7.21e-85 | FFCP PHASE2:Hg19::chr4:2794535..2794549,-#_c9651190742648153934e0ba06587ad6 | p@chr4:2794535..2794549, - |
| 7.21e-85 | FFCP PHASE1:Hg19::chr4:2794535..2794549,-#_c9651190742648153934e0ba06587ad6 | p@chr4:2794535..2794549, - |
| 6.07e-75 | FFCP PHASE2:Hg19::chr9:137267629..137267639,-#_dcc5d3b12b021e189958c2ed7bc7c523 | p@chr9:137267629..137267639, - |
| 6.07e-75 | FFCP PHASE1:Hg19::chr9:137267629..137267639,-#_dcc5d3b12b021e189958c2ed7bc7c523 | p@chr9:137267629..137267639, - |
| 7.81e-75 | FFCP PHASE2:Hg19::chr6:31584663..31584673,-#_8ef1864bde45f5c25ed63060cab37ed4 | p@chr6:31584663..31584673, - |
| 7.81e-75 | FFCP PHASE1:Hg19::chr6:31584663..31584673,-#_8ef1864bde45f5c25ed63060cab37ed4 | p@chr6:31584663..31584673, - |
| 5.01e-67 | FFCP PHASE1:Hg19::chr6:144952186..144952227,+#_1db0e821783627536ffd5dea1b4a2c65 | p@chr6:144952186..144952227, + |
| 5.01e-67 | FFCP PHASE2:Hg19::chr3:101597149..101597179,+#_1db0e821783627536ffd5dea1b4a2c65 | p@chr3:101597149..101597179, + |
| 5.01e-67 | FFCP PHASE1:Hg19::chr16:4563100..4563144,-#_1db0e821783627536ffd5dea1b4a2c65 | p12@C16orf5 |
| 5.01e-67 | FFCP PHASE2:Hg19::chr20:825297..825306,+#_1db0e821783627536ffd5dea1b4a2c65 | p7@FAM110A |
| 5.01e-67 | FFCP PHASE1:Hg19::chr10:114594528..114594539,-#_1db0e821783627536ffd5dea1b4a2c65 | p@chr10:114594528..114594539, - |
| 5.01e-67 | FFCP PHASE1:Hg19::chr3:101597149..101597179,+#_1db0e821783627536ffd5dea1b4a2c65 | p@chr3:101597149..101597179, + |
| 5.01e-67 | FFCP PHASE2:Hg19::chr16:4563100..4563144,-#_1db0e821783627536ffd5dea1b4a2c65 | p12@C16orf5 |
| 5.01e-67 | FFCP PHASE1:Hg19::chr20:825297..825306,+#_1db0e821783627536ffd5dea1b4a2c65 | p7@FAM110A |
| 5.01e-67 | FFCP PHASE2:Hg19::chr10:114594528..114594539,-#_1db0e821783627536ffd5dea1b4a2c65 | p@chr10:114594528..114594539, - |
| 5.01e-67 | FFCP PHASE2:Hg19::chr2:29337114..29337117,+#_1db0e821783627536ffd5dea1b4a2c65 | p21@CLIP4 |
| 5.01e-67 | FFCP PHASE1:Hg19::chr2:29337114..29337117,+#_1db0e821783627536ffd5dea1b4a2c65 | p21@CLIP4 |
| 5.01e-67 | FFCP PHASE2:Hg19::chr6:144952186..144952227,+#_1db0e821783627536ffd5dea1b4a2c65 | p@chr6:144952186..144952227, + |
| 6.27e-67 | FFCP PHASE1:Hg19::chr2:241906877..241906887,-#_1eb841de3a8762c1013c5bfa8146d2bf | p3@LOC200772 |
| 6.27e-67 | FFCP PHASE2:Hg19::chr11:67415202..67415246,-#_1eb841de3a8762c1013c5bfa8146d2bf | p5@ACY3 |
| 6.27e-67 | FFCP PHASE1:Hg19::chr11:67415202..67415246,-#_1eb841de3a8762c1013c5bfa8146d2bf | p5@ACY3 |
| 6.27e-67 | FFCP PHASE1:Hg19::chr10:115080077..115080087,-#_1eb841de3a8762c1013c5bfa8146d2bf | p@chr10:115080077..115080087, - |
| 6.27e-67 | FFCP PHASE2:Hg19::chr10:115080077..115080087,-#_1eb841de3a8762c1013c5bfa8146d2bf | p@chr10:115080077..115080087, - |
| 6.27e-67 | FFCP PHASE2:Hg19::chr2:241906877..241906887,-#_1eb841de3a8762c1013c5bfa8146d2bf | p3@LOC200772 |
| 9.82e-67 | FFCP PHASE2:Hg19::chr19:50285177..50285181,+#_f69715357c0bbacfe5d9e3eac03e6789 | p@chr19:50285177..50285181, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr19:50285177..50285181,+#_f69715357c0bbacfe5d9e3eac03e6789 | p@chr19:50285177..50285181, + |
| 9.82e-67 | FFCP PHASE2:Hg19::chr20:827656..827661,-#_f69715357c0bbacfe5d9e3eac03e6789 | p@chr20:827656..827661, - |
| 9.82e-67 | FFCP PHASE1:Hg19::chr20:827656..827661,-#_f69715357c0bbacfe5d9e3eac03e6789 | p@chr20:827656..827661, - |
| 9.82e-67 | FFCP PHASE2:Hg19::chr2:2685878..2685892,+#_f69715357c0bbacfe5d9e3eac03e6789 | p@chr2:2685878..2685892, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr2:2685878..2685892,+#_f69715357c0bbacfe5d9e3eac03e6789 | p@chr2:2685878..2685892, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:172232848..172232850,-#_7520eb33c065d180fc24c375e67306b0 | p@chr5:172232848..172232850, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:172232848..172232850,-#_7520eb33c065d180fc24c375e67306b0 | p@chr5:172232848..172232850, - |
| 3.76e-66 | FFCP PHASE2:Hg19::chr17:4689735..4689745,-#_8398c5f2fe64ac896388d60705fa6e08 | p2@VMO1 |
| 3.76e-66 | FFCP PHASE2:Hg19::chr8:56800914..56800925,+#_8398c5f2fe64ac896388d60705fa6e08 | p@chr8:56800914..56800925, + |
| 3.76e-66 | FFCP PHASE1:Hg19::chr17:4689735..4689745,-#_8398c5f2fe64ac896388d60705fa6e08 | p2@VMO1 |
| 3.76e-66 | FFCP PHASE1:Hg19::chr8:56800914..56800925,+#_8398c5f2fe64ac896388d60705fa6e08 | p@chr8:56800914..56800925, + |
| 3.76e-66 | FFCP PHASE2:Hg19::chr2:121011117..121011127,+#_8398c5f2fe64ac896388d60705fa6e08 | p16@RALB |
| 3.76e-66 | FFCP PHASE1:Hg19::chr2:121011117..121011127,+#_8398c5f2fe64ac896388d60705fa6e08 | p16@RALB |
| 4.68e-66 | FFCP PHASE2:Hg19::chr2:241906961..241906992,+#_3a871d825844c08b452993ce16f50e5c | p@chr2:241906961..241906992, + |
| 4.68e-66 | FFCP PHASE1:Hg19::chr2:241906961..241906992,+#_3a871d825844c08b452993ce16f50e5c | p@chr2:241906961..241906992, + |
| 1.33e-60 | FFCP PHASE1:Hg19::chr14:23282256..23282282,-#_f35ffc3acfaa23f76294038ceaadad95 | p17@SLC7A7 |
| 1.33e-60 | FFCP PHASE2:Hg19::chr14:23282256..23282282,-#_f35ffc3acfaa23f76294038ceaadad95 | p17@SLC7A7 |
| 1.33e-60 | FFCP PHASE1:Hg19::chr16:1538881..1538887,+#_f35ffc3acfaa23f76294038ceaadad95 | p@chr16:1538881..1538887, + |
| 1.33e-60 | FFCP PHASE2:Hg19::chr16:1538881..1538887,+#_f35ffc3acfaa23f76294038ceaadad95 | p@chr16:1538881..1538887, + |
| 1.62e-60 | FFCP PHASE2:Hg19::chr5:56136714..56136717,+#_cd1e729eef9e835ef4b24b98da91ecb6 | p@chr5:56136714..56136717, + |
| 1.62e-60 | FFCP PHASE1:Hg19::chr5:56136714..56136717,+#_cd1e729eef9e835ef4b24b98da91ecb6 | p@chr5:56136714..56136717, + |
| 2.43e-60 | FFCP PHASE1:Hg19::chr3:50654306..50654308,-#_0cf5a92bd72b99a95e5e203dc21cb17d | p@chr3:50654306..50654308, - |
| 2.43e-60 | FFCP PHASE2:Hg19::chr3:50658125..50658131,+#_0cf5a92bd72b99a95e5e203dc21cb17d | p@chr3:50658125..50658131, + |
| 2.43e-60 | FFCP PHASE1:Hg19::chr3:50658125..50658131,+#_0cf5a92bd72b99a95e5e203dc21cb17d | p@chr3:50658125..50658131, + |
| 2.43e-60 | FFCP PHASE2:Hg19::chr6:144980558..144980569,+#_0cf5a92bd72b99a95e5e203dc21cb17d | p30@UTRN |
| 2.43e-60 | FFCP PHASE1:Hg19::chr6:144980558..144980569,+#_0cf5a92bd72b99a95e5e203dc21cb17d | p30@UTRN |
| 2.43e-60 | FFCP PHASE2:Hg19::chr3:50654306..50654308,-#_0cf5a92bd72b99a95e5e203dc21cb17d | p@chr3:50654306..50654308, - |
| 1.22e-59 | FFCP PHASE2:Hg19::chr7:2797828..2797848,-#_3324e9bfaa3adcbd86de9383df587de1 | p@chr7:2797828..2797848, - |
| 1.22e-59 | FFCP PHASE1:Hg19::chr7:2797828..2797848,-#_3324e9bfaa3adcbd86de9383df587de1 | p@chr7:2797828..2797848, - |
| 2.4e-55 | FFCP PHASE1:Hg19::chr19:14546214..14546245,+#_e68ab7b85940999b20e3448e4afbaee9 | p@chr19:14546214..14546245, + |
| 2.4e-55 | FFCP PHASE2:Hg19::chr8:142384243..142384251,+#_e68ab7b85940999b20e3448e4afbaee9 | p@chr8:142384243..142384251, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr8:142384243..142384251,+#_e68ab7b85940999b20e3448e4afbaee9 | p@chr8:142384243..142384251, + |
| 2.4e-55 | FFCP PHASE2:Hg19::chr17:531709..531723,-#_e68ab7b85940999b20e3448e4afbaee9 | p@chr17:531709..531723, - |
| 2.4e-55 | FFCP PHASE1:Hg19::chr17:531709..531723,-#_e68ab7b85940999b20e3448e4afbaee9 | p@chr17:531709..531723, - |
| 2.4e-55 | FFCP PHASE2:Hg19::chr19:14546214..14546245,+#_e68ab7b85940999b20e3448e4afbaee9 | p@chr19:14546214..14546245, + |
| 2.88e-55 | FFCP PHASE2:Hg19::chr2:86225195..86225216,-#_c5344efe978e028a1d2526995b337f96 | p@chr2:86225195..86225216, - |
| 2.88e-55 | FFCP PHASE1:Hg19::chr2:86225195..86225216,-#_c5344efe978e028a1d2526995b337f96 | p@chr2:86225195..86225216, - |
