CL:0002553

Name:	lung fibroblast
Namespace:	FANTOM
Definition:	"A fibroblast that is part of lung." [GOC:tfm]
Xrefs:	Expandlinks: BTO:0000764
Created by:	tmeehan
Creation date:	2011-02-28T05:11:03Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

---

Parents

is_a:	CL:0000057(fibroblast),CL_0000057()
part_of:	UBERON:0002048(lung)

Children

is a:	FF:10730-110B1 (non-small cell lung cancer cell line:NCI-H1385)
derives from:	FF:0000064 (human fibroblast of lung sample),FF:0100161 (lung fibroblast cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

---

Human (Homo sapiens)

• 10446-106F5
• 10730-110B1 (non-small cell lung cancer cell line:NCI-H1385)
• 11270-116H1 (Fibroblast - Lung, donor1)
• 11347-117G6 (Fibroblast - Lung, donor2)
• 11419-118F6 (Fibroblast - Lung, donor3)

Mouse (Mus musculus)

• 10446-106F5
• 10730-110B1 (non-small cell lung cancer cell line:NCI-H1385)
• 11270-116H1 (Fibroblast - Lung, donor1)
• 11347-117G6 (Fibroblast - Lung, donor2)
• 11419-118F6 (Fibroblast - Lung, donor3)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002553 (lung fibroblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

---

Copy Excel CSV PDF

Search:

P-value	FFCP	Short description

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr8:13988549..13988555,+	p@chr8:13988549..13988555, +
5.42e-195	FFCP PHASE2:Hg19::chr18:63412228..63412270,+	p@chr18:63412228..63412270, +
5.42e-195	FFCP PHASE1:Hg19::chr18:63412128..63412151,+	p@chr18:63412128..63412151, +
5.42e-195	FFCP PHASE1:Hg19::chr8:13988549..13988555,+	p@chr8:13988549..13988555, +
5.42e-195	FFCP PHASE1:Hg19::chr18:63412228..63412270,+	p@chr18:63412228..63412270, +
5.42e-195	FFCP PHASE2:Hg19::chr4:93512357..93512364,+	p@chr4:93512357..93512364, +
5.42e-195	FFCP PHASE1:Hg19::chr4:93512357..93512364,+	p@chr4:93512357..93512364, +
5.42e-195	FFCP PHASE2:Hg19::chr18:63412128..63412151,+	p@chr18:63412128..63412151, +
9.37e-99	FFCP PHASE1:Hg19::chr8:114449612..114449615,-	p10@CSMD3
9.37e-99	FFCP PHASE2:Hg19::chr1:246382944..246382951,-	p@chr1:246382944..246382951, -
9.37e-99	FFCP PHASE2:Hg19::chr4:116434644..116434654,+	p@chr4:116434644..116434654, +
9.37e-99	FFCP PHASE1:Hg19::chr11:13809056..13809057,+	p@chr11:13809056..13809057, +
9.37e-99	FFCP PHASE2:Hg19::chr11:13809056..13809057,+	p@chr11:13809056..13809057, +
9.37e-99	FFCP PHASE2:Hg19::chr6:28479346..28479352,+	p@chr6:28479346..28479352, +
9.37e-99	FFCP PHASE1:Hg19::chr4:116434644..116434654,+	p@chr4:116434644..116434654, +
9.37e-99	FFCP PHASE2:Hg19::chr2:115918789..115918795,-	p3@ENST00000448663
9.37e-99	FFCP PHASE1:Hg19::chr1:246382944..246382951,-	p@chr1:246382944..246382951, -
9.37e-99	FFCP PHASE1:Hg19::chr2:115918789..115918795,-	p3@ENST00000448663
9.37e-99	FFCP PHASE1:Hg19::chr6:28479346..28479352,+	p@chr6:28479346..28479352, +
9.37e-99	FFCP PHASE2:Hg19::chr8:114449612..114449615,-	p10@CSMD3
2.55e-98	FFCP PHASE2:Hg19::chr10:22657489..22657502,+	p@chr10:22657489..22657502, +
2.55e-98	FFCP PHASE2:Hg19::chr6:18208412..18208420,+	p@chr6:18208412..18208420, +
2.55e-98	FFCP PHASE1:Hg19::chr10:22657523..22657534,+	p@chr10:22657523..22657534, +
2.55e-98	FFCP PHASE2:Hg19::chr7:25354153..25354185,+	p@chr7:25354153..25354185, +
2.55e-98	FFCP PHASE1:Hg19::chr7:157944243..157944249,-	p@chr7:157944243..157944249, -
2.55e-98	FFCP PHASE2:Hg19::chrX:118161803..118161808,-	p@chrX:118161803..118161808, -
2.55e-98	FFCP PHASE2:Hg19::chr10:22657523..22657534,+	p@chr10:22657523..22657534, +
2.55e-98	FFCP PHASE1:Hg19::chr8:114449616..114449629,-	p3@CSMD3
2.55e-98	FFCP PHASE1:Hg19::chr7:25354153..25354185,+	p@chr7:25354153..25354185, +
2.55e-98	FFCP PHASE1:Hg19::chr6:18208412..18208420,+	p@chr6:18208412..18208420, +
2.55e-98	FFCP PHASE1:Hg19::chrX:118161803..118161808,-	p@chrX:118161803..118161808, -
2.55e-98	FFCP PHASE1:Hg19::chr13:110782380..110782393,-	p@chr13:110782380..110782393, -
2.55e-98	FFCP PHASE2:Hg19::chr13:110782380..110782393,-	p@chr13:110782380..110782393, -
2.55e-98	FFCP PHASE1:Hg19::chr10:22657489..22657502,+	p@chr10:22657489..22657502, +
2.55e-98	FFCP PHASE2:Hg19::chr8:114449616..114449629,-	p3@CSMD3
2.55e-98	FFCP PHASE2:Hg19::chr7:157944243..157944249,-	p@chr7:157944243..157944249, -
1.23e-66	FFCP PHASE1:Hg19::chr1:168356398..168356401,+	p@chr1:168356398..168356401, +
1.23e-66	FFCP PHASE2:Hg19::chr18:63418785..63418796,+	p@chr18:63418785..63418796, +
1.23e-66	FFCP PHASE2:Hg19::chr1:239571457..239571466,+	p18@CHRM3
1.23e-66	FFCP PHASE2:Hg19::chr17:26715557..26715559,+	p@chr17:26715557..26715559, +
1.23e-66	FFCP PHASE2:Hg19::chr12:57638896..57638928,-	p@chr12:57638896..57638928, -
1.23e-66	FFCP PHASE2:Hg19::chr19:51412411..51412426,-	p4@KLK4
1.23e-66	FFCP PHASE2:Hg19::chr7:1968190..1968198,-	p@chr7:1968190..1968198, -
1.23e-66	FFCP PHASE2:Hg19::chr5:77683792..77683799,+	p@chr5:77683792..77683799, +
1.23e-66	FFCP PHASE1:Hg19::chr17:26715557..26715559,+	p@chr17:26715557..26715559, +
1.23e-66	FFCP PHASE1:Hg19::chr19:51412411..51412426,-	p4@KLK4
1.23e-66	FFCP PHASE1:Hg19::chr7:1968190..1968198,-	p@chr7:1968190..1968198, -
1.23e-66	FFCP PHASE1:Hg19::chr18:63418785..63418796,+	p@chr18:63418785..63418796, +
1.23e-66	FFCP PHASE1:Hg19::chr10:5407085..5407093,+	p5@UCN3
1.23e-66	FFCP PHASE1:Hg19::chr11:69518108..69518118,-	p@chr11:69518108..69518118, -
1.23e-66	FFCP PHASE1:Hg19::chr1:239571457..239571466,+	p18@CHRM3
1.23e-66	FFCP PHASE2:Hg19::chr11:69518108..69518118,-	p@chr11:69518108..69518118, -
1.23e-66	FFCP PHASE2:Hg19::chr10:5407085..5407093,+	p5@UCN3
1.23e-66	FFCP PHASE1:Hg19::chr5:77683792..77683799,+	p@chr5:77683792..77683799, +
1.23e-66	FFCP PHASE1:Hg19::chr11:69518332..69518343,-	p@chr11:69518332..69518343, -
1.23e-66	FFCP PHASE2:Hg19::chr11:69518332..69518343,-	p@chr11:69518332..69518343, -
1.23e-66	FFCP PHASE2:Hg19::chr1:168356398..168356401,+	p@chr1:168356398..168356401, +
1.23e-66	FFCP PHASE1:Hg19::chr12:57638896..57638928,-	p@chr12:57638896..57638928, -
2.39e-66	FFCP PHASE2:Hg19::chr12:127385138..127385144,-	p@chr12:127385138..127385144, -
2.39e-66	FFCP PHASE2:Hg19::chr18:71843159..71843180,+	p@chr18:71843159..71843180, +
2.39e-66	FFCP PHASE1:Hg19::chr18:71843121..71843138,+	p@chr18:71843121..71843138, +
2.39e-66	FFCP PHASE1:Hg19::chr4:116209677..116209718,+	p@chr4:116209677..116209718, +
2.39e-66	FFCP PHASE2:Hg19::chr1:223895346..223895353,-	p@chr1:223895346..223895353, -
2.39e-66	FFCP PHASE2:Hg19::chr18:72611750..72611755,+	p@chr18:72611750..72611755, +
2.39e-66	FFCP PHASE2:Hg19::chr6:18208425..18208436,+	p@chr6:18208425..18208436, +
2.39e-66	FFCP PHASE2:Hg19::chr7:100810466..100810470,+	p@chr7:100810466..100810470, +
2.39e-66	FFCP PHASE2:Hg19::chr22:49769903..49769910,+	p@chr22:49769903..49769910, +
2.39e-66	FFCP PHASE2:Hg19::chr4:3344434..3344441,+	p@chr4:3344434..3344441, +
2.39e-66	FFCP PHASE1:Hg19::chr18:71843159..71843180,+	p@chr18:71843159..71843180, +
2.39e-66	FFCP PHASE2:Hg19::chr7:1968200..1968208,-	p@chr7:1968200..1968208, -
2.39e-66	FFCP PHASE1:Hg19::chr1:223895346..223895353,-	p@chr1:223895346..223895353, -
2.39e-66	FFCP PHASE1:Hg19::chr7:100810466..100810470,+	p@chr7:100810466..100810470, +
2.39e-66	FFCP PHASE1:Hg19::chr4:3344434..3344441,+	p@chr4:3344434..3344441, +
2.39e-66	FFCP PHASE1:Hg19::chr22:49769903..49769910,+	p@chr22:49769903..49769910, +
2.39e-66	FFCP PHASE2:Hg19::chr7:15071427..15071430,-	p@chr7:15071427..15071430, -
2.39e-66	FFCP PHASE1:Hg19::chr7:1968200..1968208,-	p@chr7:1968200..1968208, -
2.39e-66	FFCP PHASE1:Hg19::chr18:72611750..72611755,+	p@chr18:72611750..72611755, +
2.39e-66	FFCP PHASE1:Hg19::chr6:18208425..18208436,+	p@chr6:18208425..18208436, +
2.39e-66	FFCP PHASE1:Hg19::chr10:5060201..5060211,-	p5@AKR1C2
2.39e-66	FFCP PHASE2:Hg19::chr10:5060201..5060211,-	p5@AKR1C2
2.39e-66	FFCP PHASE1:Hg19::chr12:127385138..127385144,-	p@chr12:127385138..127385144, -
2.39e-66	FFCP PHASE1:Hg19::chr7:15071427..15071430,-	p@chr7:15071427..15071430, -
2.39e-66	FFCP PHASE2:Hg19::chr18:71843121..71843138,+	p@chr18:71843121..71843138, +
2.39e-66	FFCP PHASE2:Hg19::chr4:116209677..116209718,+	p@chr4:116209677..116209718, +
4.66e-66	FFCP PHASE1:Hg19::chr7:44574294..44574303,-	p@chr7:44574294..44574303, -
4.66e-66	FFCP PHASE1:Hg19::chr12:53686428..53686432,+	p@chr12:53686428..53686432, +
4.66e-66	FFCP PHASE2:Hg19::chrX:118621021..118621027,-	p@chrX:118621021..118621027, -
4.66e-66	FFCP PHASE2:Hg19::chr9:33719660..33719671,-	p@chr9:33719660..33719671, -
4.66e-66	FFCP PHASE2:Hg19::chr12:53686428..53686432,+	p@chr12:53686428..53686432, +
4.66e-66	FFCP PHASE1:Hg19::chr13:79169067..79169071,-	p@chr13:79169067..79169071, -
4.66e-66	FFCP PHASE1:Hg19::chrX:118621021..118621027,-	p@chrX:118621021..118621027, -
4.66e-66	FFCP PHASE2:Hg19::chr2:108602414..108602423,+	p@chr2:108602414..108602423, +
4.66e-66	FFCP PHASE2:Hg19::chr13:79169067..79169071,-	p@chr13:79169067..79169071, -
4.66e-66	FFCP PHASE1:Hg19::chr9:33719660..33719671,-	p@chr9:33719660..33719671, -
4.66e-66	FFCP PHASE2:Hg19::chr4:3310694..3310716,-	p@chr4:3310694..3310716, -
4.66e-66	FFCP PHASE2:Hg19::chr2:108746272..108746286,+	p@chr2:108746272..108746286, +
4.66e-66	FFCP PHASE2:Hg19::chr22:49819110..49819121,-	p5@C22orf34
4.66e-66	FFCP PHASE2:Hg19::chr7:44574294..44574303,-	p@chr7:44574294..44574303, -
4.66e-66	FFCP PHASE1:Hg19::chr2:108602414..108602423,+	p@chr2:108602414..108602423, +
4.66e-66	FFCP PHASE1:Hg19::chr4:3310694..3310716,-	p@chr4:3310694..3310716, -

Showing 1 to 100 of 100 entries