CL:0002577

Name:	placental epithelial cell
Namespace:	FANTOM
Definition:	"An epithelial cell of the placenta." [GOC:tfm]
Created by:	tmeehan
Creation date:	2011-03-02T03:21:30Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000066(epithelial cell),CL:0000349(extraembryonic cell)
part_of:	UBERON:0001987(placenta)

Children

derives from:	FF:0000136 (human placental epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11278-116H9 (Placental Epithelial Cells, donor1)
• 11355-117H5 (Placental Epithelial Cells, donor2)
• 11427-118G5 (Placental Epithelial Cells, donor3)

Mouse (Mus musculus)

• 11278-116H9 (Placental Epithelial Cells, donor1)
• 11355-117H5 (Placental Epithelial Cells, donor2)
• 11427-118G5 (Placental Epithelial Cells, donor3)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002577 (placental epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
2.33e-118	FFCP PHASE1:Hg19::chr11:1982869..1982890,+	p@chr11:1982869..1982890, +
2.33e-118	FFCP PHASE2:Hg19::chr11:1982869..1982890,+	p@chr11:1982869..1982890, +
5.2e-118	FFCP PHASE1:Hg19::chr5:153858046..153858049,+	p@chr5:153858046..153858049, +
5.2e-118	FFCP PHASE2:Hg19::chr5:153858046..153858049,+	p@chr5:153858046..153858049, +
7.78e-118	FFCP PHASE2:Hg19::chr5:153854787..153854796,-	p@chr5:153854787..153854796, -
7.78e-118	FFCP PHASE1:Hg19::chr5:153854787..153854796,-	p@chr5:153854787..153854796, -
1.16e-117	FFCP PHASE2:Hg19::chr1:209704573..209704587,+	p@chr1:209704573..209704587, +
1.16e-117	FFCP PHASE1:Hg19::chr1:209704573..209704587,+	p@chr1:209704573..209704587, +
1.73e-117	FFCP PHASE1:Hg19::chr1:209704648..209704656,+	p@chr1:209704648..209704656, +
1.73e-117	FFCP PHASE2:Hg19::chr1:209704648..209704656,+	p@chr1:209704648..209704656, +
7.95e-99	FFCP PHASE1:Hg19::chr14:24729174..24729183,-	p17@TGM1
7.95e-99	FFCP PHASE2:Hg19::chr14:24729174..24729183,-	p17@TGM1
1.55e-98	FFCP PHASE1:Hg19::chr5:89143573..89143607,-	p@chr5:89143573..89143607, -
1.55e-98	FFCP PHASE2:Hg19::chr3:134044856..134044890,+	p@chr3:134044856..134044890, +
1.55e-98	FFCP PHASE1:Hg19::chr3:134044856..134044890,+	p@chr3:134044856..134044890, +
1.55e-98	FFCP PHASE2:Hg19::chr5:89143573..89143607,-	p@chr5:89143573..89143607, -
2.17e-98	FFCP PHASE1:Hg19::chr3:55384353..55384357,+	p@chr3:55384353..55384357, +
2.17e-98	FFCP PHASE2:Hg19::chr3:55384353..55384357,+	p@chr3:55384353..55384357, +
3.03e-98	FFCP PHASE2:Hg19::chr1:209704612..209704625,+	p@chr1:209704612..209704625, +
3.03e-98	FFCP PHASE1:Hg19::chr1:209704612..209704625,+	p@chr1:209704612..209704625, +
4.24e-98	FFCP PHASE2:Hg19::chr17:37824598..37824605,+	p15@PNMT
4.24e-98	FFCP PHASE1:Hg19::chr17:37824598..37824605,+	p15@PNMT
1.52e-87	FFCP PHASE1:Hg19::chr12:51785088..51785093,-	p12@GALNT6
1.52e-87	FFCP PHASE2:Hg19::chr12:51785088..51785093,-	p12@GALNT6
2.28e-85	FFCP PHASE1:Hg19::chr14:104202639..104202646,-	p@chr14:104202639..104202646, -
2.28e-85	FFCP PHASE2:Hg19::chr14:104202639..104202646,-	p@chr14:104202639..104202646, -
3.04e-85	FFCP PHASE1:Hg19::chr9:88126069..88126080,-	p@chr9:88126069..88126080, -
3.04e-85	FFCP PHASE1:Hg19::chr5:153855055..153855066,-	p@chr5:153855055..153855066, -
3.04e-85	FFCP PHASE2:Hg19::chr9:88126069..88126080,-	p@chr9:88126069..88126080, -
3.04e-85	FFCP PHASE2:Hg19::chr5:153855055..153855066,-	p@chr5:153855055..153855066, -
4.06e-85	FFCP PHASE1:Hg19::chr20:61288222..61288232,+	p14@SLCO4A1
4.06e-85	FFCP PHASE2:Hg19::chr17:37824217..37824226,+	p12@PNMT
4.06e-85	FFCP PHASE1:Hg19::chr17:37824217..37824226,+	p12@PNMT
4.06e-85	FFCP PHASE2:Hg19::chr20:61288222..61288232,+	p14@SLCO4A1
1.28e-84	FFCP PHASE2:Hg19::chr5:170239966..170239982,+	p@chr5:170239966..170239982, +
1.28e-84	FFCP PHASE1:Hg19::chr5:170239966..170239982,+	p@chr5:170239966..170239982, +
2.27e-84	FFCP PHASE1:Hg19::chr10:131344593..131344605,+	p@chr10:131344593..131344605, +
2.27e-84	FFCP PHASE2:Hg19::chr10:131344593..131344605,+	p@chr10:131344593..131344605, +
3.03e-84	FFCP PHASE2:Hg19::chr5:170176045..170176055,-	p@chr5:170176045..170176055, -
3.03e-84	FFCP PHASE1:Hg19::chr5:170176045..170176055,-	p@chr5:170176045..170176055, -
7.81e-75	FFCP PHASE1:Hg19::chr19:36593849..36593866,+	p@chr19:36593849..36593866, +
7.81e-75	FFCP PHASE2:Hg19::chr2:237683203..237683210,+	p@chr2:237683203..237683210, +
7.81e-75	FFCP PHASE1:Hg19::chr2:237683203..237683210,+	p@chr2:237683203..237683210, +
7.81e-75	FFCP PHASE2:Hg19::chr19:36593849..36593866,+	p@chr19:36593849..36593866, +
1.29e-74	FFCP PHASE2:Hg19::chr3:146323019..146323049,-	p1@PLSCR5
1.29e-74	FFCP PHASE1:Hg19::chr3:146323019..146323049,-	p1@PLSCR5
1.66e-74	FFCP PHASE2:Hg19::chr8:27995319..27995365,+	p@chr8:27995319..27995365, +
1.66e-74	FFCP PHASE1:Hg19::chr8:27995319..27995365,+	p@chr8:27995319..27995365, +
3.54e-74	FFCP PHASE1:Hg19::chr11:1950008..1950019,+	p@chr11:1950008..1950019, +
3.54e-74	FFCP PHASE2:Hg19::chr11:1950008..1950019,+	p@chr11:1950008..1950019, +
9.64e-74	FFCP PHASE1:Hg19::chr17:2278441..2278454,+	p13@SGSM2
9.64e-74	FFCP PHASE2:Hg19::chr17:2278441..2278454,+	p13@SGSM2
9.82e-67	FFCP PHASE1:Hg19::chr2:237682972..237682977,+	p@chr2:237682972..237682977, +
9.82e-67	FFCP PHASE2:Hg19::chr2:237682972..237682977,+	p@chr2:237682972..237682977, +
1.23e-66	FFCP PHASE1:Hg19::chr19:36592910..36592917,+	p@chr19:36592910..36592917, +
1.23e-66	FFCP PHASE2:Hg19::chr19:36592910..36592917,+	p@chr19:36592910..36592917, +
1.92e-66	FFCP PHASE2:Hg19::chr3:54925431..54925442,+	p@chr3:54925431..54925442, +
1.92e-66	FFCP PHASE1:Hg19::chr3:54925431..54925442,+	p@chr3:54925431..54925442, +
2.39e-66	FFCP PHASE2:Hg19::chr2:75796805..75796806,-	p25@FAM176A
2.39e-66	FFCP PHASE1:Hg19::chr2:75796805..75796806,-	p25@FAM176A
2.41e-66	FFCP PHASE1:Hg19::chr10:134227398..134227410,+	p@chr10:134227398..134227410, +
2.41e-66	FFCP PHASE2:Hg19::chr10:134227398..134227410,+	p@chr10:134227398..134227410, +
3.35e-66	FFCP PHASE2:Hg19::chr1:209704633..209704641,+	p@chr1:209704633..209704641, +
3.35e-66	FFCP PHASE1:Hg19::chr1:209704633..209704641,+	p@chr1:209704633..209704641, +
3.76e-66	FFCP PHASE2:Hg19::chr17:2278481..2278491,+	p14@SGSM2
3.76e-66	FFCP PHASE1:Hg19::chr17:2278481..2278491,+	p14@SGSM2
4.68e-66	FFCP PHASE1:Hg19::chr11:64008110..64008119,+	p23@FKBP2
4.68e-66	FFCP PHASE2:Hg19::chr11:64008110..64008119,+	p23@FKBP2
5.88e-66	FFCP PHASE2:Hg19::chr6:31083761..31083775,-	p@chr6:31083761..31083775, -
5.88e-66	FFCP PHASE1:Hg19::chr6:31083761..31083775,-	p@chr6:31083761..31083775, -
7.35e-66	FFCP PHASE2:Hg19::chr6:31083723..31083738,-	p@chr6:31083723..31083738, -
7.35e-66	FFCP PHASE1:Hg19::chr6:31083723..31083738,-	p@chr6:31083723..31083738, -
1.33e-60	FFCP PHASE2:Hg19::chr19:36592959..36592975,+	p@chr19:36592959..36592975, +
1.33e-60	FFCP PHASE2:Hg19::chr19:36592982..36592993,+	p@chr19:36592982..36592993, +
1.33e-60	FFCP PHASE1:Hg19::chr19:36592959..36592975,+	p@chr19:36592959..36592975, +
1.33e-60	FFCP PHASE1:Hg19::chr19:36592982..36592993,+	p@chr19:36592982..36592993, +
4.46e-60	FFCP PHASE1:Hg19::chr14:24729251..24729267,-	p9@TGM1
4.46e-60	FFCP PHASE2:Hg19::chr14:24729251..24729267,-	p9@TGM1
4.46e-60	FFCP PHASE2:Hg19::chr18:6286777..6286797,+	p@chr18:6286777..6286797, +
4.46e-60	FFCP PHASE1:Hg19::chr18:6286777..6286797,+	p@chr18:6286777..6286797, +
7.24e-55	FFCP PHASE2:Hg19::chr16:81679150..81679182,+	p17@CMIP
7.24e-55	FFCP PHASE1:Hg19::chr16:81679150..81679182,+	p17@CMIP
8.69e-55	FFCP PHASE2:Hg19::chr20:61287795..61287809,+	p4@SLCO4A1
8.69e-55	FFCP PHASE1:Hg19::chr20:61287795..61287809,+	p4@SLCO4A1
1.25e-54	FFCP PHASE2:Hg19::chr6:12161831..12161855,+	p@chr6:12161831..12161855, +
1.25e-54	FFCP PHASE1:Hg19::chr6:12161831..12161855,+	p@chr6:12161831..12161855, +
1.81e-54	FFCP PHASE1:Hg19::chr10:50818416..50818427,+	p3@SLC18A3
1.81e-54	FFCP PHASE2:Hg19::chr10:50818416..50818427,+	p3@SLC18A3
2.19e-53	FFCP PHASE1:Hg19::chr11:16893073..16893090,-	p@chr11:16893073..16893090, -
2.19e-53	FFCP PHASE2:Hg19::chr11:16893073..16893090,-	p@chr11:16893073..16893090, -
2.19e-53	FFCP PHASE2:Hg19::chr19:48980975..48980978,+	p@chr19:48980975..48980978, +
2.19e-53	FFCP PHASE1:Hg19::chr19:48980975..48980978,+	p@chr19:48980975..48980978, +
3.75e-53	FFCP PHASE1:Hg19::chr12:4140802..4140815,+	p@chr12:4140802..4140815, +
3.75e-53	FFCP PHASE1:Hg19::chr19:45848386..45848393,+	p6@KLC3
3.75e-53	FFCP PHASE2:Hg19::chr12:4140802..4140815,+	p@chr12:4140802..4140815, +
3.75e-53	FFCP PHASE2:Hg19::chr19:45848386..45848393,+	p6@KLC3
6.85e-51	FFCP PHASE2:Hg19::chr5:153858071..153858085,+	p@chr5:153858071..153858085, +
6.85e-51	FFCP PHASE1:Hg19::chr5:153858071..153858085,+	p@chr5:153858071..153858085, +
8.11e-51	FFCP PHASE2:Hg19::chr2:237683156..237683171,+	p@chr2:237683156..237683171, +
8.11e-51	FFCP PHASE1:Hg19::chr5:153855212..153855222,-	p@chr5:153855212..153855222, -

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