CL:0002590
From FANTOM5_SSTAR
| Name: | smooth muscle cell of the brain vasculature |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A vascular associated smooth muscle cell of the brain vasculature." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:01:20Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell),CL:0002319(neural cell) |
|---|---|
| part_of: | UBERON:0005284(brain vasculature) |
Children
| derives from: | FF:0000170 (human smooth muscle cell of the brain vasculature sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11315-117D1 (Smooth Muscle Cells - Brain Vascular, donor2)
- 11391-118C5 (Smooth Muscle Cells - Brain Vascular, donor3)
Mouse (Mus musculus)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11315-117D1 (Smooth Muscle Cells - Brain Vascular, donor2)
- 11391-118C5 (Smooth Muscle Cells - Brain Vascular, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002590 (smooth muscle cell of the brain vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
