CL:1000497
From FANTOM5_SSTAR
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000548(animal cell),CL:0002371(somatic cell) |
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part_of: | UBERON:0002113(kidney) |
Children
is a: | CL:0002518 (kidney epithelial cell),CL:0002681 (kidney cortical cell),CL:1000500 (kidney interstitial cell),CL:1000507 (kidney tubule cell),CL:1001318 (renal interstitial pericyte) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10466-106H7
- 10471-106I3 (renal cell carcinoma cell line:TUHR10TKB)
- 10517-107E4
- 10518-107E5
- 10519-107E6
- 10540-107G9
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
... further results Mouse (Mus musculus)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10466-106H7
- 10471-106I3 (renal cell carcinoma cell line:TUHR10TKB)
- 10517-107E4
- 10518-107E5
- 10519-107E6
- 10540-107G9
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000497 (kidney cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data