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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE1:Hg19::chr2:135169581..135169587,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135169581..135169587, +
3.1e-50FFCP PHASE2:Hg19::chr8:57525544..57525580,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:57525544..57525580, +
3.1e-50FFCP PHASE2:Hg19::chr6:998859..998863,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998859..998863, -
3.1e-50FFCP PHASE2:Hg19::chr3:77129779..77129782,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:77129779..77129782, +
3.1e-50FFCP PHASE1:Hg19::chr12:133040060..133040064,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:133040060..133040064, +
3.1e-50FFCP PHASE2:Hg19::chr2:103235132..103235142,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235132..103235142, +
3.1e-50FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961449..97961460, -
3.1e-50FFCP PHASE2:Hg19::chr2:68113370..68113379,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:68113370..68113379, -
3.1e-50FFCP PHASE2:Hg19::chr12:76206813..76206837,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:76206813..76206837, -
3.1e-50FFCP PHASE2:Hg19::chr10:129704201..129704232,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704201..129704232, -
3.1e-50FFCP PHASE2:Hg19::chr7:138721040..138721056,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:138721040..138721056, +
3.1e-50FFCP PHASE2:Hg19::chr4:37653629..37653673,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:37653629..37653673, -
3.1e-50FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:125306070..125306106, +
3.1e-50FFCP PHASE1:Hg19::chr6:17845348..17845358,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:17845348..17845358, -
3.1e-50FFCP PHASE1:Hg19::chr2:192805239..192805246,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:192805239..192805246, +
3.1e-50FFCP PHASE1:Hg19::chr8:116215335..116215378,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215335..116215378, +
3.1e-50FFCP PHASE2:Hg19::chr7:95776285..95776292,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95776285..95776292, -
3.1e-50FFCP PHASE2:Hg19::chr5:28572013..28572023,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:28572013..28572023, -
3.1e-50FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92571252..92571265, -
3.1e-50FFCP PHASE1:Hg19::chr10:129704512..129704515,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704512..129704515, +
3.1e-50FFCP PHASE2:Hg19::chr17:63528638..63528642,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:63528638..63528642, +
3.1e-50FFCP PHASE1:Hg19::chr3:95401565..95401581,-#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000463799
3.1e-50FFCP PHASE1:Hg19::chr21:26144899..26144920,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:26144899..26144920, -
3.1e-50FFCP PHASE2:Hg19::chr8:116215608..116215615,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215608..116215615, +
3.1e-50FFCP PHASE1:Hg19::chr14:25326297..25326305,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:25326297..25326305, -
3.1e-50FFCP PHASE1:Hg19::chr12:84664736..84664743,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000547882
3.1e-50FFCP PHASE1:Hg19::chr10:36850273..36850276,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:36850273..36850276, -
3.1e-50FFCP PHASE2:Hg19::chr13:76563913..76563916,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76563913..76563916, +
3.1e-50FFCP PHASE2:Hg19::chr10:121863383..121863387,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:121863383..121863387, -
3.1e-50FFCP PHASE1:Hg19::chr9:97856010..97856019,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:97856010..97856019, +
3.1e-50FFCP PHASE2:Hg19::chr8:82275651..82275662,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:82275651..82275662, +
3.1e-50FFCP PHASE2:Hg19::chr3:95401649..95401655,-#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000463799
3.1e-50FFCP PHASE1:Hg19::chr19:46531064..46531073,+#_5be4114e7d0131f457d60e83d77a108dp@chr19:46531064..46531073, +
3.1e-50FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:125547084..125547089, +
3.1e-50FFCP PHASE2:Hg19::chr5:146890999..146891017,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:146890999..146891017, -
3.1e-50FFCP PHASE2:Hg19::chr3:194808375..194808396,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:194808375..194808396, +
3.1e-50FFCP PHASE2:Hg19::chr10:29213480..29213487,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:29213480..29213487, -
3.1e-50FFCP PHASE1:Hg19::chr13:76554315..76554319,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76554315..76554319, +
3.1e-50FFCP PHASE2:Hg19::chr1:168756079..168756087,+#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000420691
3.1e-50FFCP PHASE2:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:50553120..50553126, -
3.1e-50FFCP PHASE1:Hg19::chr6:23637684..23637686,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:23637684..23637686, -
3.1e-50FFCP PHASE1:Hg19::chr4:178653531..178653568,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:178653531..178653568, +
3.1e-50FFCP PHASE1:Hg19::chr3:86701921..86701925,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86701921..86701925, -
3.1e-50FFCP PHASE1:Hg19::chr2:220594691..220594695,+#_5be4114e7d0131f457d60e83d77a108dp4@ENST00000442416
3.1e-50FFCP PHASE1:Hg19::chr14:60194459..60194462,-#_5be4114e7d0131f457d60e83d77a108dp43@RTN1
3.1e-50FFCP PHASE2:Hg19::chr2:192805413..192805418,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:192805413..192805418, +
3.1e-50FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:41519057..41519065, -
3.1e-50FFCP PHASE2:Hg19::chr13:26155734..26155742,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:26155734..26155742, +
3.1e-50FFCP PHASE1:Hg19::chr4:41750020..41750029,-#_5be4114e7d0131f457d60e83d77a108dp9@PHOX2B
3.1e-50FFCP PHASE1:Hg19::chr2:234862417..234862434,+#_5be4114e7d0131f457d60e83d77a108dp6@TRPM8
3.1e-50FFCP PHASE2:Hg19::chr9:17454025..17454033,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17454025..17454033, +
3.1e-50FFCP PHASE2:Hg19::chr3:86703134..86703137,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86703134..86703137, -
3.1e-50FFCP PHASE2:Hg19::chr2:220594700..220594702,+#_5be4114e7d0131f457d60e83d77a108dp6@ENST00000442416
3.1e-50FFCP PHASE2:Hg19::chr14:60194070..60194083,-#_5be4114e7d0131f457d60e83d77a108dp25@RTN1
3.1e-50FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98070371..98070384, -
3.1e-50FFCP PHASE1:Hg19::chr6:141460346..141460355,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:141460346..141460355, +
3.1e-50FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840323..79840338, +
3.1e-50FFCP PHASE1:Hg19::chr18:28978481..28978484,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:28978481..28978484, -
3.1e-50FFCP PHASE1:Hg19::chr14:57021818..57021822,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57021818..57021822, +
3.1e-50FFCP PHASE2:Hg19::chr3:186548894..186548902,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:186548894..186548902, +
3.1e-50FFCP PHASE2:Hg19::chr2:8803669..8803680,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:8803669..8803680, -
3.1e-50FFCP PHASE2:Hg19::chr21:26151976..26151979,+#_5be4114e7d0131f457d60e83d77a108dp@chr21:26151976..26151979, +
3.1e-50FFCP PHASE2:Hg19::chr13:95133382..95133389,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:95133382..95133389, -
3.1e-50FFCP PHASE1:Hg19::chr5:33619084..33619089,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33619084..33619089, -
3.1e-50FFCP PHASE2:Hg19::chr7:84651827..84651832,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:84651827..84651832, -
3.1e-50FFCP PHASE1:Hg19::chr1:181360920..181360925,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:181360920..181360925, +
3.1e-50FFCP PHASE2:Hg19::chr15:36739964..36739979,-#_5be4114e7d0131f457d60e83d77a108dp@chr15:36739964..36739979, -
3.1e-50FFCP PHASE1:Hg19::chr3:78360347..78360353,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:78360347..78360353, +
3.1e-50FFCP PHASE1:Hg19::chr14:60194043..60194066,-#_5be4114e7d0131f457d60e83d77a108dp18@RTN1
3.1e-50FFCP PHASE2:Hg19::chr19:46531131..46531136,+#_5be4114e7d0131f457d60e83d77a108dp@chr19:46531131..46531136, +
3.1e-50FFCP PHASE2:Hg19::chr10:65821760..65821780,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:65821760..65821780, +
3.1e-50FFCP PHASE1:Hg19::chrX:97443927..97443947,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:97443927..97443947, +
3.1e-50FFCP PHASE1:Hg19::chr7:7749088..7749127,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:7749088..7749127, +
3.1e-50FFCP PHASE1:Hg19::chr2:222160756..222160761,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160756..222160761, +
3.1e-50FFCP PHASE1:Hg19::chr18:74671119..74671124,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:74671119..74671124, +
3.1e-50FFCP PHASE2:Hg19::chr3:78360522..78360543,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:78360522..78360543, +
3.1e-50FFCP PHASE2:Hg19::chr14:58439259..58439262,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58439259..58439262, -
3.1e-50FFCP PHASE2:Hg19::chr11:98528704..98528712,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:98528704..98528712, +
3.1e-50FFCP PHASE1:Hg19::chr8:97972117..97972120,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97972117..97972120, -
3.1e-50FFCP PHASE2:Hg19::chr7:79765099..79765103,+#_5be4114e7d0131f457d60e83d77a108dp29@GNAI1
3.1e-50FFCP PHASE2:Hg19::chr10:129704562..129704569,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704562..129704569, +
3.1e-50FFCP PHASE1:Hg19::chrX:135761853..135761876,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761853..135761876, -
3.1e-50FFCP PHASE2:Hg19::chr8:97962018..97962029,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97962018..97962029, -
3.1e-50FFCP PHASE2:Hg19::chr2:234862436..234862439,+#_5be4114e7d0131f457d60e83d77a108dp16@TRPM8
3.1e-50FFCP PHASE1:Hg19::chr9:129291797..129291800,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:129291797..129291800, -
3.1e-50FFCP PHASE2:Hg19::chr8:98073725..98073731,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98073725..98073731, -
3.1e-50FFCP PHASE2:Hg19::chr8:38441630..38441635,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:38441630..38441635, +
3.1e-50FFCP PHASE2:Hg19::chr6:141715304..141715307,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:141715304..141715307, +
3.1e-50FFCP PHASE2:Hg19::chr4:139019174..139019198,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:139019174..139019198, -
3.1e-50FFCP PHASE1:Hg19::chr14:58415850..58415853,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58415850..58415853, -
3.1e-50FFCP PHASE2:Hg19::chr18:28978481..28978484,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:28978481..28978484, -
3.1e-50FFCP PHASE1:Hg19::chrX:69542573..69542578,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:69542573..69542578, +
3.1e-50FFCP PHASE2:Hg19::chr5:33650078..33650111,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33650078..33650111, -
3.1e-50FFCP PHASE1:Hg19::chr10:129710296..129710320,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:129710296..129710320, -
3.1e-50FFCP PHASE2:Hg19::chr14:58045730..58045732,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045730..58045732, -
3.1e-50FFCP PHASE1:Hg19::chr8:139510692..139510697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:139510692..139510697, -

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