EntrezGene:107581

Symbol:	Col16a1
Description:	collagen, type XVI, alpha 1
Synonyms:	2700007F12Rik, A530052M23Rik, AI838662, CA1F
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:107581 MGI:1095396 Ensembl:ENSMUSG00000040690 Vega:OTTMUSG00000009516
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr4:129724604..129724633,+	p4@Col16a1
Mm9::chr4:129725100..129725145,+	p1@Col16a1
Mm9::chr4:129725158..129725173,+	p2@Col16a1
Mm9::chr4:129732267..129732291,+	p6@Col16a1
Mm9::chr4:129732334..129732345,+	p8@Col16a1
Mm9::chr4:129732523..129732528,+	p5@Col16a1
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Col16a1	p2@Col16a1	p4@Col16a1	p5@Col16a1

Sample	p1@Col16a1	p2@Col16a1	p4@Col16a1	p5@Col16a1
forelimb, embryo E18.CNhs11008.1520-43B5	309.08	60.29	1.85	0.21
forelimb, embryo E17.CNhs10598.1517-43C4	246.21	53.63	3.48	0.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	243.19	47.86	3.16	0.20
whole body, neonate N06.CNhs10515.692-21D1	238.46	42.13	1.99	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	223.24	45.78	1.29	0.32
uterus, adult pregnant day19.CNhs10497.590-15F5	183.37	34.16	7.13	0.00
whole body, neonate N01.CNhs10576.659-23C6	180.58	32.90	2.68	0.19
whole body, neonate N10.CNhs10518.761-6B4	179.23	31.30	3.01	0.00
forelimb, embryo E15.CNhs11007.437-20E7	178.78	40.04	1.67	0.28
ovary, embryo E18.CNhs11040.505-44H7	170.59	39.71	0.89	0.18
skin, neonate N10.CNhs11108.762-6C4	152.32	19.37	1.81	0.33
whole body, embryo E17.CNhs10517.475-3I5	146.64	31.23	1.50	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	139.28	20.54	2.25	0.00
ovary, neonate N00.CNhs11217.1299-22I4	139.11	31.44	1.95	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	135.03	29.32	0.77	0.39
skin, neonate N06.CNhs11097.693-20I5	131.55	17.07	3.10	0.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	128.12	19.71	2.02	0.25
bone (os femoris), neonate N20.CNhs11195.1350-25C3	125.10	31.52	0.97	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	123.95	20.53	1.77	0.25
whole body, embryo E18.CNhs10516.493-3B3	122.11	23.16	2.81	0.70
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	121.38	20.57	2.74	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	120.04	44.95	0.54	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	120.01	18.00	2.67	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	118.47	17.72	1.65	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	118.44	21.65	2.74	0.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	118.40	17.40	2.81	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	116.34	41.80	1.15	0.16
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	115.00	22.36	2.48	0.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	113.66	21.22	2.03	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	113.60	20.67	1.28	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	112.65	24.28	1.41	0.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	112.45	22.51	1.10	0.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	110.86	26.06	3.30	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	110.32	26.37	1.36	0.00
stomach, embryo E17.CNhs11006.1035-18D5	109.35	18.61	1.67	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	108.65	19.24	0.94	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	107.02	25.48	7.64	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	106.73	28.02	2.06	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	105.59	18.63	1.90	0.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	105.39	18.36	2.38	0.24
oviduct, adult pregnant day01.CNhs10500.988-6G6	105.25	23.59	2.80	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	103.65	19.47	1.32	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	103.48	22.67	1.47	0.44
forelimb, embryo E14.CNhs10577.413-26A8	102.58	28.06	0.22	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	102.26	24.79	1.24	0.00
eyeball, neonate N00.CNhs11207.633-15C6	101.44	19.53	1.29	0.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	101.42	18.63	1.86	0.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	99.07	21.43	1.43	0.00
whole body, embryo E14.5.CNhs10578.420-27D2	98.94	26.26	0.97	0.49
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	98.19	22.14	1.77	0.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	97.67	22.57	1.78	0.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	96.17	27.01	1.23	0.00
whole body, neonate N00.CNhs10525.657-19C2	95.40	15.47	1.93	0.43
skin, neonate N03.CNhs11215.662-22H3	95.29	15.56	3.14	0.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	94.91	14.70	2.67	8.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	94.86	21.97	2.07	0.00
eyeball, neonate N01.CNhs11140.1532-43E7	94.68	16.01	0.64	0.38
stomach, embryo E18.CNhs10999.1286-20C6	94.55	18.56	3.28	0.44
stomach, embryo E16.CNhs11022.459-17D4	91.48	18.79	0.76	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	91.43	21.80	1.70	10.19
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	90.76	39.90	14.87	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	89.54	22.11	1.32	0.11
stomach, neonate N07.CNhs11210.718-18A9	89.35	14.88	3.64	0.17
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	89.35	18.54	1.85	0.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	88.93	22.18	1.35	0.39
skin, neonate N00.CNhs11124.650-25G4	87.19	13.24	5.01	0.16
stomach, neonate N03.CNhs11193.1340-24B8	86.85	15.51	3.10	0.27
bone (os femoris), neonate N16.CNhs11225.1525-43A6	86.35	13.47	2.43	0.00
uterus, adult.CNhs10509.92-27E5	86.26	16.48	3.85	0.00
testis, embryo E16.CNhs11033.470-26G5	86.14	14.19	1.56	0.19
testis, embryo E17.CNhs11029.486-18I5	84.60	15.50	1.42	0.00
stomach, embryo E15.CNhs10603.1252-16G8	83.36	18.71	1.42	0.00
skin, adult.CNhs10492.30-1C3	82.11	12.86	2.31	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	79.77	14.61	1.52	0.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	78.62	13.62	2.63	6.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	78.28	11.55	12.83	0.00
testis, neonate N00.CNhs11189.1300-22B7	77.57	14.20	2.23	0.00
eyeball, neonate N02.CNhs11205.1551-44G8	76.84	19.02	0.84	0.37
testis, embryo E18.CNhs11027.503-18G5	76.03	10.14	2.03	0.00
intestine, embryo E15.CNhs10602.976-16D8	73.58	16.24	1.16	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	72.64	13.47	4.15	0.00
lung, neonate N06.CNhs11212.683-20E5	71.72	10.40	3.78	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	71.64	14.75	1.80	0.00
testis, neonate N07.CNhs11222.726-26I4	71.61	11.59	2.47	0.00
lung, neonate N10.CNhs11219.750-23E6	71.60	15.47	3.51	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	71.35	11.75	5.44	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	69.43	11.61	2.52	0.00
lung, neonate N07.CNhs11111.715-19A3	69.32	12.18	3.54	0.22
gonad, embryo E13.CNhs11044.1564-45I6	68.07	14.73	0.40	0.00
vagina, adult.CNhs10502.89-27D5	66.03	13.51	3.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	65.01	10.60	1.77	0.00
eyeball, neonate N16.CNhs11188.777-19A2	63.90	8.02	0.78	0.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	63.40	13.46	2.05	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	62.96	21.28	0.53	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	62.75	9.23	3.95	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	62.46	13.04	1.19	3.16
whole body, embryo E16.CNhs10514.453-14F2	60.12	14.52	0.74	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	59.50	15.91	1.15	0.23
pancreas, embryo E17.CNhs10599.1558-45G3	57.58	12.11	0.59	0.30
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	56.89	21.33	0.00	0.00
lung, embryo E15.CNhs11020.432-17C5	56.53	13.24	0.51	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	56.11	9.94	1.17	2.05
spleen, embryo E16.CNhs11035.461-43C1	55.31	14.65	1.44	0.00
kidney, embryo E18.CNhs11001.1288-20C7	55.28	10.67	1.36	0.19
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	55.14	22.23	2.67	0.00
urinary bladder, adult.CNhs10481.879-12E4	53.90	6.18	2.32	0.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	53.26	12.73	1.82	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	53.26	15.61	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	52.39	8.73	3.94	9.44
intestine, neonate N07.CNhs11095.720-20F2	52.13	9.15	2.59	0.20
pancreas, neonate N02.CNhs11139.1539-43D8	51.69	8.91	2.50	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	51.15	17.96	0.61	0.00
ovary, adult.CNhs10507.91-2I7	51.10	8.23	2.41	0.00
intestine, neonate N10.CNhs11098.755-23A5	50.50	9.16	1.56	0.00
whole body, embryo E13.CNhs10512.372-23H2	50.37	13.49	0.34	0.00
kidney, embryo E17.CNhs11028.483-18I2	50.10	8.76	0.41	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	49.81	24.40	2.03	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	48.58	9.31	0.40	1.21
spleen, embryo E18.CNhs11011.1271-21F2	48.52	15.19	1.30	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	48.47	10.83	7.74	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	48.47	8.19	0.86	2.59
kidney, embryo E16.CNhs10584.464-22A5	48.46	11.27	1.13	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	48.33	7.64	1.65	0.47
eyeball, embryo E15.CNhs10593.426-16C9	48.26	14.22	0.36	0.18
forelimb, embryo E13.CNhs10589.384-1E2	47.86	15.13	0.88	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	47.46	9.37	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	46.94	11.27	1.41	0.23
intestine, embryo E18.CNhs10526.1289-20F7	46.80	6.85	0.76	0.00
pancreas, embryo E14.CNhs11012.405-44F4	46.37	6.07	0.24	0.00
stomach, neonate N25.CNhs11104.1355-25E4	46.07	6.02	2.36	0.00
intestine, embryo E17.CNhs10582.482-18D3	45.81	12.23	0.67	0.00
intestine, neonate N06.CNhs11102.688-20B8	45.49	7.29	2.26	0.25
pancreas, embryo E18.CNhs10580.1535-43I7	45.19	11.99	0.31	0.31
pancreas, neonate N00.CNhs11105.645-26G9	44.97	9.30	1.03	0.00
lung, embryo E14.CNhs10604.404-26F8	44.65	11.73	0.49	0.00
intestine, embryo E16.CNhs10585.463-22H4	44.37	9.28	1.61	0.40
intestine, embryo E13.CNhs11010.381-16D5	44.36	10.45	1.16	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	44.34	14.38	3.30	0.90
testis, embryo E15.CNhs11034.443-27C5	43.68	11.42	0.17	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	43.62	8.72	1.82	0.36
amnion, adult pregnant day17.5.CNhs10488.583-22A8	43.51	9.39	2.97	0.00
eyeball, embryo E14.CNhs10521.399-16E2	43.45	9.66	0.46	0.00
pituitary gland, embryo E14.CNhs11037.398-44A5	43.30	15.65	0.64	0.00
lung, embryo E17.CNhs10605.480-44A6	43.22	10.72	2.68	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	42.71	8.23	2.83	0.00
kidney, neonate N10.CNhs11206.758-6D5	42.62	9.80	1.45	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	42.49	3.86	0.28	0.00
heart, neonate N03.CNhs11221.1349-25I2	42.46	7.08	1.65	0.33
whole body, embryo E14.CNhs10519.395-14B1	42.13	9.64	0.42	0.00
kidney, neonate N00.CNhs11214.646-21G7	41.45	10.10	1.12	0.07
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	41.16	10.78	2.24	0.14
kidney, embryo E15.CNhs10997.434-16F8	40.56	7.88	0.69	0.00
lung, embryo E12.CNhs10522.354-16G2	40.55	9.66	1.14	0.00
heart, embryo E16.CNhs11021.457-17C6	40.26	9.10	0.77	0.00
heart, embryo E14.CNhs10597.403-26D4	39.06	10.65	0.24	0.00
thymus, embryo E15.CNhs11005.430-45I2	36.67	6.37	0.51	0.00
pancreas, embryo E16.CNhs11003.460-26E5	36.02	9.81	0.57	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	35.87	7.39	0.30	0.75
pituitary gland, embryo E13.CNhs11009.370-44C7	34.54	10.74	0.52	0.00
lung, embryo E18.CNhs10583.1287-20I6	34.52	9.05	2.38	0.00
intestine, neonate N01.CNhs11192.1322-23E9	34.09	7.74	0.99	0.16
testis, embryo E13.CNhs11031.389-23F5	33.49	6.28	0.90	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	33.43	6.53	0.77	0.77
heart, embryo E13.CNhs11013.376-3I9	33.13	8.28	0.00	0.00
lung, neonate N20.CNhs11109.822-18A4	32.61	5.08	2.79	0.16
testis, neonate N10.CNhs11204.763-44D9	32.19	4.93	1.36	0.42
heart, embryo E18.CNhs11030.1283-20G3	31.92	6.98	1.07	0.00
heart, embryo E15.CNhs11017.431-16C8	31.29	7.08	0.79	0.00
lung, neonate N25.CNhs11119.1359-25C7	30.74	4.49	2.94	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	30.08	6.12	0.76	2.04
heart, embryo E17.CNhs11025.479-18E5	29.30	6.51	0.47	0.23
heart, neonate N10.CNhs11118.749-24G1	29.06	5.75	1.97	0.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	28.40	5.68	0.00	0.00
thymus, embryo E14.CNhs11041.402-44I4	28.18	6.28	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	27.44	4.93	0.23	0.00
lung, neonate N30.CNhs11133.1394-42H2	27.19	3.91	3.91	0.00
prostate, adult.CNhs10470.859-1F8	24.92	2.21	0.88	0.22
small intestine, neonate N16.CNhs11114.790-21I1	24.19	4.96	1.17	0.29
forelimb, embryo E12.CNhs10600.359-14H2	24.02	6.62	0.57	0.00
stomach, embryo E12.CNhs10588.356-43E3	23.88	4.75	0.32	0.00
heart, neonate N00.CNhs11213.639-21E3	23.24	5.37	1.63	0.12
adrenal gland, neonate N25.CNhs11223.1377-27I3	23.12	5.03	0.88	0.00
lung, neonate N00.CNhs11224.640-42C6	22.83	6.83	4.29	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	22.65	6.25	0.00	0.00
intestine, embryo E12.CNhs11019.1251-16I5	21.54	4.27	0.64	0.00
adrenal gland, adult.CNhs10508.49-24D7	20.49	2.67	1.48	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	20.13	1.44	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	19.78	1.98	0.00	0.00
stomach, neonate N30.CNhs11134.1386-42I1	19.31	3.76	0.52	0.13
epididymis, adult.CNhs10490.58-23B2	18.95	3.54	0.76	0.00
kidney, embryo E14.CNhs10606.411-4I9	18.78	4.36	0.38	0.00
vesicular gland, adult.CNhs10491.51-27F8	18.56	2.01	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	18.43	3.31	0.21	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	18.23	3.95	0.88	0.22
heart, neonate N25.CNhs11196.1351-25D3	18.22	2.85	1.10	0.22
whole body, embryo E12.CNhs10587.857-27C9	17.96	5.99	0.40	0.00
liver, neonate N10.CNhs11115.751-24B9	17.79	1.87	3.43	0.00
intestine, neonate N25.CNhs11121.1352-25E3	17.72	4.32	1.08	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	17.70	1.48	0.98	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	17.65	8.46	0.18	0.00
lung, adult.CNhs10474.28-22B1	17.55	1.85	1.29	0.00
thymus, embryo E17.CNhs10581.478-18C1	17.54	3.94	0.72	0.00
liver, neonate N07.CNhs11103.716-20H2	17.49	2.23	0.74	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	17.45	5.74	1.10	1.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	16.81	2.90	0.29	0.00
pancreas, neonate N16.CNhs11136.787-43B6	16.75	1.26	1.90	0.32
heart, neonate N16.CNhs11209.782-15G1	16.70	2.35	1.70	0.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	16.43	3.37	0.56	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	16.34	3.55	2.13	0.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	16.16	2.98	1.02	0.00
thymus, embryo E16.CNhs11002.456-26C5	15.98	2.99	0.26	0.00
heart, neonate N30.CNhs11202.1390-42D2	15.97	1.88	0.40	0.13
tongue, adult.CNhs10499.32-1B4	14.74	1.36	0.68	0.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	14.44	3.83	0.59	1.18
intestine, neonate N20.CNhs11187.827-18D1	14.38	2.70	0.00	0.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	13.95	4.95	0.90	0.00
heart, neonate N20.CNhs11127.821-26I6	13.60	1.90	1.32	0.00
intestine, neonate N30.CNhs11131.1384-42G1	13.54	2.99	0.20	0.00
bone (os femoris), adult.CNhs10483.56-12G2	13.27	0.88	0.88	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	13.26	1.87	0.00	0.00
aorta, adult.CNhs10498.46-23H1	12.72	0.87	0.43	0.00
spleen, neonate N10.CNhs11116.752-24D1	12.43	1.51	1.88	0.00
stomach, adult.CNhs10503.33-1H6	12.41	1.91	0.95	0.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	12.39	3.42	0.28	2.42
testis, neonate N20.CNhs11110.839-18H3	12.32	2.17	0.72	0.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	12.28	2.00	0.29	1.14
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	12.05	1.72	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	11.93	2.67	0.78	0.00
kidney, neonate N20.CNhs11113.832-19I1	11.81	1.48	0.89	0.00
testis, neonate N30.CNhs11130.1391-42E2	11.81	1.15	0.86	0.00
liver, embryo E17.CNhs10510.481-18A3	11.71	1.27	0.76	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	11.60	3.16	0.00	0.00
eyeball, embryo E12.CNhs11016.345-16C6	11.45	2.34	0.91	0.00
spleen, neonate N25.CNhs11099.1354-25G3	11.44	2.29	2.29	0.00
intestine, neonate N00.CNhs11126.644-26D1	11.39	2.37	0.95	0.00
cecum, adult.CNhs10467.37-13H4	11.18	3.73	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	10.98	2.47	0.82	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	10.91	1.51	0.17	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	10.36	2.21	0.00	0.00
eyeball, adult.CNhs10484.31-12G4	10.31	2.31	0.42	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	10.17	1.69	0.42	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	10.08	1.68	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	10.06	1.44	0.00	0.00
olfactory brain, adult.CNhs10489.18-22I9	9.96	0.64	0.32	0.32
thymus, embryo E18.CNhs10595.1273-19G4	9.93	2.98	0.20	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	9.28	1.03	0.00	0.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	8.94	0.58	0.39	0.00
liver, embryo E18.CNhs10579.499-43G4	8.92	4.03	0.86	0.00
liver, embryo E13.CNhs10524.378-3H6	8.85	1.18	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	8.51	2.34	0.99	0.00
pancreas, adult.CNhs10486.34-16E4	7.96	1.33	0.00	0.00
thymus, neonate N06.CNhs11197.681-26C4	7.27	1.31	0.20	0.10
corpora quadrigemina, adult.CNhs10501.16-22A4	6.89	0.75	3.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	6.83	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	6.69	1.42	0.20	0.00
liver, embryo E12.CNhs10601.355-15F8	6.67	0.83	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	6.57	2.27	0.25	0.00
intestine, adult.CNhs10496.178-9A3	6.35	0.53	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	5.92	1.08	0.36	0.00
spleen, neonate N20.CNhs11112.824-19H1	5.88	0.82	1.23	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	5.85	0.45	1.80	0.00
spinal cord, adult.CNhs10505.24-13C9	5.75	1.48	0.00	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	5.68	0.97	1.46	0.16
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	5.65	0.56	0.56	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	5.63	1.88	0.00	0.00
medulla oblongata, adult.CNhs10477.17-12C2	5.46	0.96	0.00	0.32
thymus, neonate N02.CNhs11181.1541-43F8	5.41	1.32	0.24	0.00
diencephalon, adult.CNhs10482.20-12F2	5.40	0.62	1.04	0.00
liver, embryo E16.CNhs10523.462-17F5	5.31	1.93	0.48	0.00
liver, neonate N00.CNhs11117.641-24F4	5.19	1.78	1.30	0.00
pituitary gland, adult.CNhs10493.21-1G8	5.11	0.34	0.00	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	5.04	1.38	0.46	0.15
forelimb, embryo E11.CNhs10596.335-25E2	4.96	1.94	0.00	0.00
thymus, neonate N03.CNhs11137.2104-43C7	4.87	1.03	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	4.72	1.12	0.22	0.00
cortex, neonate N30.CNhs11107.1392-42F2	4.60	0.26	3.58	0.26
corpus striatum, adult.CNhs10487.19-21D8	4.58	0.00	0.92	0.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	4.47	1.30	0.00	0.56
hippocampus, adult.CNhs10478.13-16E8	4.42	0.42	0.63	0.00
colon, adult.CNhs10468.36-18H7	4.34	1.02	0.51	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	4.10	0.94	0.70	0.35
accessory axillary lymph node, adult.CNhs10475.1063-29H9	3.88	0.52	0.52	0.00
liver, neonate N30.CNhs11106.1382-42D1	3.86	2.89	0.00	0.00
cortex, adult.CNhs10473.12-14D5	3.82	1.56	1.91	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	3.78	0.76	0.76	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	3.77	1.14	0.23	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	3.58	0.26	0.13	0.13
liver, adult pregnant day01.CNhs10466.508-5B2	3.56	0.30	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	3.49	0.44	0.22	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	3.48	0.98	0.15	2.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	3.46	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	3.43	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	3.38	1.13	0.00	0.56
spleen, adult.CNhs10465.25-2G2	3.25	0.51	1.03	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	3.17	0.91	0.91	0.00
thymus, neonate N10.CNhs11194.748-24E4	2.92	0.10	0.10	0.00
thymus, neonate N07.CNhs11211.713-19D3	2.90	0.84	0.15	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	2.76	0.00	0.92	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	2.70	0.68	0.68	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	2.68	0.62	0.21	0.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	2.59	0.52	0.52	0.52
thymus, adult.CNhs10471.38-12B5	2.53	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	2.23	0.69	0.52	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	2.20	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	1.84	0.00	0.00	0.00
thymus, neonate N30.CNhs11132.1393-42G2	1.75	0.12	0.00	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	1.72	0.57	1.15	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	1.69	0.31	0.15	0.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	1.68	0.28	0.56	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	1.68	0.24	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	1.66	0.33	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	1.52	0.25	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	1.52	0.51	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	1.42	1.01	0.20	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	1.36	0.00	0.00	0.00
thymus, neonate N25.CNhs11125.1362-25G7	1.35	0.29	0.29	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	1.30	0.65	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	1.27	0.19	0.00	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	1.26	0.42	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	1.20	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	1.11	0.22	0.44	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	1.09	0.20	0.10	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	1.06	0.00	0.53	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	1.05	0.42	0.42	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	1.04	0.41	0.10	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	1.04	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	1.02	0.00	0.00	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	0.95	0.00	0.14	0.14
whole body, embryo E11.CNhs11014.324-5I8	0.93	0.31	0.31	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.91	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.90	0.00	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	0.88	0.29	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	0.81	0.20	0.00	0.20
intestinal mucosa, adult.CNhs10506.860-29I3	0.66	0.00	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	0.63	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.58	0.29	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.57	0.00	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.56	0.00	0.00	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	0.55	0.18	0.09	0.27
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.54	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.54	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.50	0.00	0.00	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	0.50	0.25	1.01	0.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.44	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	0.38	0.19	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.38	0.13	0.00	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	0.37	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.35	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.33	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.32	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.32	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.26	0.00	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	0.26	0.40	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.26	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.17	0.00	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.19	0.19	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00	0.00

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p1@Col16a1
p2@Col16a1
p4@Col16a1
p5@Col16a1

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	107581
LocusTag:	RP23-12J1.1
chromosome:	4
map location:	4 D2.2, 4, 4 D2.2;;4
type of gene:	protein-coding
Symbol from nomenclature authority:	Col16a1
Full name from nomenclature authority:	collagen, type XVI, alpha 1
Nomenclature status:	O
Other designations:	[a]1 (XVI) collagen, collagen alpha-1(XVI) chain, procollagen type XVI alpha 1, procollagen, type XVI, alpha 1, [a]1 (XVI) collagen;;collagen alpha-1(XVI) chain;;procollagen type XVI alpha 1;;procollagen, type XVI, alpha 1
Modification date:	18.11.2011