EntrezGene:12816

Symbol:	Col12a1
Description:	collagen, type XII, alpha 1
Synonyms:	AW743884
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:12816 MGI:88448 Ensembl:ENSMUSG00000032332 Vega:OTTMUSG00000021365
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr9:79487579..79487585,-	p10@Col12a1
Mm9::chr9:79566376..79566379,-	p11@Col12a1
Mm9::chr9:79566394..79566399,-	p8@Col12a1
Mm9::chr9:79566419..79566427,-	p5@Col12a1
Mm9::chr9:79566438..79566455,-	p1@Col12a1
Mm9::chr9:79566548..79566559,-	p4@Col12a1
Mm9::chr9:79566563..79566570,-	p7@Col12a1
Mm9::chr9:79566572..79566584,-	p2@Col12a1
Mm9::chr9:79566598..79566608,-	p6@Col12a1
Mm9::chr9:79566610..79566625,-	p3@Col12a1
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Col12a1	p2@Col12a1	p3@Col12a1	p4@Col12a1	p5@Col12a1

Sample	p1@Col12a1	p2@Col12a1	p3@Col12a1	p4@Col12a1	p5@Col12a1
bone (os femoris), neonate N02.CNhs11227.1985-43F5	459.58	26.69	19.25	16.50	12.29
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	409.36	5.13	0.00	6.42	34.65
whole body, neonate N01.CNhs10576.659-23C6	365.93	19.70	11.09	15.49	13.58
forelimb, embryo E18.CNhs11008.1520-43B5	347.57	28.40	25.72	17.08	17.70
whole body, neonate N06.CNhs10515.692-21D1	327.80	22.06	14.78	10.59	9.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	327.09	0.00	0.00	7.11	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	289.75	37.61	34.48	19.85	13.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	245.21	11.82	9.70	6.47	6.34
bone (os femoris), neonate N20.CNhs11195.1350-25C3	236.13	16.00	13.09	4.36	4.85
whole body, neonate N10.CNhs10518.761-6B4	230.94	13.68	10.90	6.26	8.81
pituitary gland, embryo E16.CNhs11036.449-43F6	224.74	33.71	29.07	15.52	10.17
urinary bladder, adult.CNhs10481.879-12E4	217.53	4.64	2.32	9.66	4.64
pituitary gland, embryo E17.CNhs11039.1265-44F5	213.09	27.48	23.86	11.19	11.02
whole body, neonate N00.CNhs10525.657-19C2	209.93	12.89	7.95	8.38	7.09
skin, neonate N00.CNhs11124.650-25G4	206.19	9.20	3.71	6.14	10.01
bone (os femoris), neonate N16.CNhs11225.1525-43A6	188.60	13.25	7.73	6.18	5.74
whole body, embryo E17.CNhs10517.475-3I5	184.11	21.98	19.74	9.99	6.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	182.19	22.20	14.36	14.36	9.98
eyeball, neonate N00.CNhs11207.633-15C6	180.64	12.18	8.91	9.32	8.37
whole body, embryo E18.CNhs10516.493-3B3	171.00	17.78	11.46	10.99	4.91
whole body, embryo E17.5.CNhs10513.490-9F9	162.62	17.75	14.08	8.68	8.49
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	160.53	5.10	2.55	2.55	0.00
forelimb, embryo E15.CNhs11007.437-20E7	149.31	37.54	26.41	16.96	15.01
skin, neonate N03.CNhs11215.662-22H3	147.77	9.35	5.79	6.39	7.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	140.85	16.27	8.98	10.66	7.86
pituitary gland, neonate N00.CNhs11190.1308-22E9	140.36	10.35	10.05	5.18	5.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	137.70	7.82	5.48	5.48	14.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	136.77	13.52	12.79	7.41	7.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	133.10	9.48	6.18	4.53	5.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	130.73	13.96	9.39	5.92	4.82
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	128.88	12.63	9.35	7.58	8.34
eyeball, neonate N01.CNhs11140.1532-43E7	127.47	10.63	7.43	6.28	7.56
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	125.50	12.24	8.52	7.28	5.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	125.45	13.18	10.07	6.78	4.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	125.10	10.64	9.36	5.52	5.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	123.23	13.16	12.52	8.02	7.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	121.96	12.69	7.47	6.76	6.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	121.42	14.19	10.14	8.36	7.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	121.38	12.00	9.26	5.83	5.14
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	120.68	12.67	12.00	8.45	7.11
skin, neonate N06.CNhs11097.693-20I5	119.97	6.80	3.58	3.82	7.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	118.64	12.36	7.68	5.83	5.89
whole body, embryo E14.5.CNhs10578.420-27D2	118.39	18.72	16.53	9.24	5.59
eyeball, neonate N02.CNhs11205.1551-44G8	117.69	9.93	6.47	6.75	4.40
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	117.04	10.43	7.42	5.56	5.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	116.80	9.47	8.94	5.26	6.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	116.71	11.19	8.49	6.56	4.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	116.34	13.54	8.60	6.59	5.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	115.74	11.91	10.48	8.10	6.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	114.93	9.54	10.49	6.91	5.01
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	110.50	11.71	8.71	6.37	4.12
uterus, adult pregnant day19.CNhs10497.590-15F5	110.36	1.69	0.00	3.75	2.82
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	109.82	14.01	9.68	7.01	6.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	108.90	9.99	8.96	5.69	4.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	108.06	6.31	3.03	2.52	3.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	105.95	11.54	8.16	5.15	5.50
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	105.93	8.56	10.46	5.16	3.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	105.44	10.75	10.37	6.41	4.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	103.94	13.10	11.87	5.73	5.73
forelimb, embryo E14.CNhs10577.413-26A8	101.93	27.62	23.45	13.37	7.67
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	98.18	14.28	7.65	7.07	6.77
eyeball, embryo E17.CNhs11023.1261-18D4	98.11	16.28	12.96	10.10	6.18
eyeball, neonate N16.CNhs11188.777-19A2	96.24	6.73	3.36	5.43	4.92
skin, neonate N10.CNhs11108.762-6C4	88.80	3.12	2.79	3.45	5.25
whole body, embryo E16.CNhs10514.453-14F2	88.80	11.95	8.09	4.04	4.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	83.38	1.15	0.29	5.16	4.01
ovary, neonate N00.CNhs11217.1299-22I4	81.61	10.26	7.98	5.38	3.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	80.04	0.89	0.89	4.45	7.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	76.41	1.03	0.51	3.86	2.57
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	75.57	1.32	0.22	1.98	4.17
pituitary gland, embryo E15.CNhs10592.427-16B9	69.34	19.86	19.15	6.21	5.67
stomach, neonate N03.CNhs11193.1340-24B8	68.38	7.55	3.24	3.64	3.10
pancreas, neonate N00.CNhs11105.645-26G9	63.31	3.62	3.62	3.36	2.07
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	63.13	5.18	1.82	5.74	7.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	61.97	9.05	6.00	5.29	1.65
stomach, neonate N07.CNhs11210.718-18A9	59.68	6.20	3.14	3.39	1.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	56.41	0.85	0.00	0.51	2.56
forelimb, embryo E13.CNhs10589.384-1E2	55.60	29.56	17.24	13.20	6.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	54.07	2.62	1.31	3.92	3.71
adrenal gland, embryo E17.CNhs11043.1263-45I1	53.27	9.69	7.15	4.84	1.61
vagina, adult.CNhs10502.89-27D5	51.66	1.93	0.86	2.14	2.36
adrenal gland, embryo E16.CNhs11004.1254-43D6	50.54	8.83	8.53	5.48	2.74
amnion, adult pregnant day17.5.CNhs10488.583-22A8	50.18	4.70	0.74	4.45	0.99
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	49.97	2.72	0.00	2.53	6.61
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	49.64	0.68	0.00	0.68	0.68
eyeball, embryo E15.CNhs10593.426-16C9	48.80	17.47	8.82	11.52	5.58
whole body, embryo E14.CNhs10519.395-14B1	46.95	12.58	9.22	4.82	3.56
lung, neonate N10.CNhs11219.750-23E6	45.44	2.55	1.44	1.12	2.39
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	44.73	2.37	0.00	2.03	4.40
oviduct, adult pregnant day01.CNhs10500.988-6G6	44.54	6.27	3.13	4.29	2.14
adrenal gland, embryo E18.CNhs11026.1262-18F5	43.71	7.99	6.03	5.12	1.06
lung, neonate N07.CNhs11111.715-19A3	43.41	3.54	1.11	1.99	1.77
bone (os femoris), adult.CNhs10483.56-12G2	42.46	1.77	2.65	0.00	0.00
pituitary gland, embryo E14.CNhs11037.398-44A5	42.01	13.50	13.93	9.00	4.72
ovary, embryo E18.CNhs11040.505-44H7	41.67	7.48	8.55	3.74	3.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	41.34	0.00	0.35	1.06	4.24
stomach, embryo E18.CNhs10999.1286-20C6	41.05	3.49	3.49	3.06	2.84
stomach, neonate N25.CNhs11104.1355-25E4	39.79	1.57	0.79	1.31	0.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	39.19	1.03	0.52	1.03	1.55
pancreas, embryo E18.CNhs10580.1535-43I7	39.04	10.15	5.53	4.30	2.77
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	38.81	2.88	1.44	4.31	0.00
stomach, embryo E17.CNhs11006.1035-18D5	38.26	5.85	3.55	4.81	1.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	37.99	3.21	1.46	4.68	2.63
placenta, adult pregnant day17.CNhs10464.577-18G3	37.28	1.48	1.69	3.18	1.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	35.85	0.26	0.00	0.00	2.08
whole body, embryo E13.CNhs10512.372-23H2	35.68	16.56	9.22	6.66	3.24
lung, neonate N06.CNhs11212.683-20E5	35.47	3.00	2.52	1.73	1.73
pancreas, neonate N02.CNhs11139.1539-43D8	34.94	4.28	2.50	1.78	1.78
pancreas, neonate N01.CNhs11138.1531-43D7	32.72	4.36	3.27	3.27	2.91
intestine, embryo E18.CNhs10526.1289-20F7	32.15	5.14	4.76	3.23	2.85
stomach, embryo E16.CNhs11022.459-17D4	32.08	6.70	6.37	3.67	1.62
lung, neonate N00.CNhs11224.640-42C6	31.03	0.98	0.78	0.59	1.56
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	30.83	2.37	2.37	4.74	4.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	30.77	1.21	2.02	4.05	3.64
intestine, neonate N07.CNhs11095.720-20F2	30.44	2.98	2.79	1.59	0.99
kidney, neonate N00.CNhs11214.646-21G7	30.30	12.13	7.43	4.07	2.10
stomach, embryo E12.CNhs10588.356-43E3	30.21	7.91	5.06	4.11	1.58
intestine, embryo E15.CNhs10602.976-16D8	29.90	10.70	5.93	6.70	2.58
spleen, embryo E16.CNhs11035.461-43C1	29.31	8.46	7.43	2.27	2.48
intestine, neonate N10.CNhs11098.755-23A5	29.24	4.48	1.56	2.73	1.36
eyeball, embryo E14.CNhs10521.399-16E2	29.20	13.33	9.43	10.81	4.60
whole body, embryo E12.CNhs10587.857-27C9	29.13	13.17	13.97	4.79	3.59
intestine, neonate N06.CNhs11102.688-20B8	28.15	2.51	2.26	2.51	1.26
stomach, embryo E15.CNhs10603.1252-16G8	27.85	8.95	6.51	5.49	1.63
eyeball, adult.CNhs10484.31-12G4	27.78	2.10	0.84	1.26	1.05
intestine, neonate N01.CNhs11192.1322-23E9	27.01	3.13	2.47	1.65	0.66
pancreas, embryo E17.CNhs10599.1558-45G3	26.87	6.20	4.72	2.95	3.54
Mouse Microglia, donor1.CNhs12629.11718-123C8	26.66	2.40	0.60	1.20	2.70
intestine, embryo E17.CNhs10582.482-18D3	26.46	7.12	4.67	4.67	2.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	26.12	0.70	0.42	0.98	0.42
intestine, neonate N25.CNhs11121.1352-25E3	25.94	1.51	0.65	1.30	0.86
adrenal gland, embryo E14.CNhs11038.406-44C5	25.85	8.67	8.33	2.78	1.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	23.93	0.16	0.00	0.16	1.97
intestine, neonate N00.CNhs11126.644-26D1	23.73	1.42	0.95	0.95	1.90
intestine, embryo E16.CNhs10585.463-22H4	23.40	6.86	6.05	5.24	2.22
testis, neonate N07.CNhs11222.726-26I4	23.31	4.30	2.86	2.47	1.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	22.74	0.00	0.00	0.00	1.98
placenta, adult pregnant day10.CNhs10472.539-13I7	22.29	0.23	0.23	0.47	1.17
small intestine, neonate N16.CNhs11114.790-21I1	22.15	1.17	0.58	0.87	0.58
intestine, neonate N30.CNhs11131.1384-42G1	21.91	1.19	0.20	0.60	1.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	21.47	1.17	0.78	0.78	1.95
lung, neonate N25.CNhs11119.1359-25C7	21.07	1.21	0.35	0.35	0.52
stomach, neonate N30.CNhs11134.1386-42I1	21.00	0.78	0.91	0.52	0.65
pituitary gland, embryo E13.CNhs11009.370-44C7	20.83	11.00	7.11	3.75	1.94
pituitary gland, embryo E12.CNhs11018.346-16E6	20.71	16.03	13.14	5.58	2.34
intestine, embryo E13.CNhs11010.381-16D5	20.44	6.04	7.66	4.88	1.63
forelimb, embryo E12.CNhs10600.359-14H2	20.42	14.94	8.89	7.19	3.97
heart, embryo E18.CNhs11030.1283-20G3	20.39	2.15	1.61	2.68	1.34
epididymis, adult.CNhs10490.58-23B2	20.22	0.76	0.25	0.51	0.25
lung, embryo E12.CNhs10522.354-16G2	20.09	4.93	4.36	2.46	1.33
ovary, adult.CNhs10507.91-2I7	19.87	1.70	2.84	2.84	0.28
prostate, adult.CNhs10470.859-1F8	19.85	1.32	0.66	1.32	0.88
kidney, embryo E17.CNhs11028.483-18I2	19.75	9.57	6.72	4.07	1.22
kidney, embryo E18.CNhs11001.1288-20C7	19.59	9.31	9.50	3.49	2.13
heart, embryo E16.CNhs11021.457-17C6	18.82	3.70	1.08	2.62	1.85
testis, neonate N00.CNhs11189.1300-22B7	18.78	2.70	1.53	1.76	0.82
kidney, embryo E15.CNhs10997.434-16F8	18.51	5.83	4.91	2.97	0.57
Mouse Microglia, donor2.CNhs12634.11736-123E8	18.44	0.77	0.38	1.15	4.23
heart, neonate N03.CNhs11221.1349-25I2	18.43	1.81	0.49	0.99	0.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	17.98	1.26	1.58	2.21	3.16
heart, neonate N00.CNhs11213.639-21E3	17.75	0.82	0.35	0.93	1.05
liver, neonate N06.CNhs11101.684-20A8	17.25	4.31	0.00	1.44	1.44
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	17.23	1.55	1.77	1.10	1.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	17.09	2.06	4.12	2.06	1.77
lung, neonate N30.CNhs11133.1394-42H2	17.07	0.29	0.29	0.00	0.14
lung, adult.CNhs10474.28-22B1	16.81	0.37	0.18	0.55	0.92
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	16.65	0.45	0.00	0.00	0.00
skin, adult.CNhs10492.30-1C3	16.65	0.99	0.16	0.49	2.14
spleen, embryo E18.CNhs11011.1271-21F2	16.48	7.78	5.93	3.15	1.30
intestine, neonate N20.CNhs11187.827-18D1	16.18	0.90	0.90	0.90	0.90
kidney, neonate N10.CNhs11206.758-6D5	16.00	6.89	5.88	3.67	1.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	15.85	0.00	0.00	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	15.71	2.86	1.43	1.19	0.71
Mouse Schwann, donor2.CNhs12573.11746-123F9	15.27	0.76	0.15	0.83	1.13
heart, embryo E17.CNhs11025.479-18E5	15.11	3.26	1.16	2.56	0.93
thymus, embryo E14.CNhs11041.402-44I4	14.80	4.26	4.26	1.82	1.62
lung, neonate N20.CNhs11109.822-18A4	14.75	0.33	1.15	0.16	0.16
pancreas, embryo E16.CNhs11003.460-26E5	14.71	2.83	3.58	1.32	1.32
thymus, embryo E15.CNhs11005.430-45I2	14.69	2.36	2.57	1.23	1.44
lung, embryo E17.CNhs10605.480-44A6	14.24	2.85	3.35	0.34	1.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	14.00	3.02	2.59	1.29	4.09
aorta, adult.CNhs10498.46-23H1	13.59	0.43	0.00	0.14	0.58
gonad, embryo E13.CNhs11044.1564-45I6	12.94	5.97	9.16	2.99	0.60
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	12.79	0.00	0.00	0.00	0.71
intestine, embryo E12.CNhs11019.1251-16I5	11.73	6.19	2.35	2.77	1.71
heart, embryo E14.CNhs10597.403-26D4	11.60	3.79	1.42	4.26	0.47
lung, embryo E15.CNhs11020.432-17C5	11.37	2.38	3.73	0.85	1.19
testis, embryo E17.CNhs11029.486-18I5	11.24	2.32	1.42	1.42	0.39
pancreas, embryo E15.CNhs11042.1556-45F2	11.19	1.81	3.93	2.12	1.21
cecum, adult.CNhs10467.37-13H4	11.18	0.00	0.00	0.00	0.00
lung, embryo E14.CNhs10604.404-26F8	10.76	3.10	1.63	0.65	0.98
thymus, embryo E17.CNhs10581.478-18C1	10.38	2.33	1.61	0.36	0.72
pancreas, embryo E14.CNhs11012.405-44F4	10.20	2.91	5.10	1.94	0.49
kidney, embryo E16.CNhs10584.464-22A5	10.14	13.52	9.02	4.51	1.13
vesicular gland, adult.CNhs10491.51-27F8	10.03	2.01	0.00	0.50	0.50
heart, embryo E15.CNhs11017.431-16C8	9.64	4.13	0.98	2.95	0.20
lung, embryo E16.CNhs10998.458-17B6	9.62	2.35	1.88	0.23	0.70
adrenal gland, adult.CNhs10508.49-24D7	9.35	1.19	1.78	0.59	0.15
thymus, embryo E18.CNhs10595.1273-19G4	9.34	1.19	0.99	0.60	0.40
kidney, embryo E14.CNhs10606.411-4I9	9.29	3.41	2.28	0.95	0.57
Mouse Schwann, donor1.CNhs12507.11728-123D9	9.24	0.61	0.15	0.76	0.30
spleen, neonate N10.CNhs11116.752-24D1	9.23	0.94	0.75	0.75	0.38
testis, neonate N30.CNhs11130.1391-42E2	9.22	0.29	0.29	0.29	0.29
colon, adult.CNhs10468.36-18H7	9.20	0.77	0.00	0.51	0.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	9.14	0.86	1.43	0.57	0.86
kidney, neonate N30.CNhs11203.1385-42H1	9.01	1.73	0.99	0.62	0.12
tongue, adult.CNhs10499.32-1B4	8.84	0.91	0.00	0.00	0.45
mammary gland, adult pregnant day19.CNhs10476.588-5H2	8.83	0.55	0.00	0.28	0.28
uterus, adult.CNhs10509.92-27E5	8.79	2.38	0.37	0.55	0.37
heart, embryo E13.CNhs11013.376-3I9	8.64	4.14	0.54	3.06	0.00
heart, neonate N10.CNhs11118.749-24G1	8.54	0.16	0.66	0.66	0.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	8.12	2.42	4.13	1.14	1.28
kidney, neonate N20.CNhs11113.832-19I1	7.97	2.07	0.59	0.00	0.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	7.46	1.30	2.24	0.19	1.49
adrenal gland, neonate N25.CNhs11223.1377-27I3	7.16	1.13	0.75	0.38	0.13
eyeball, embryo E12.CNhs11016.345-16C6	7.16	6.38	5.20	4.29	1.82
heart, embryo E12.CNhs11015.353-12F5	7.04	3.28	0.94	3.28	1.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	6.89	0.10	0.00	0.00	0.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	6.17	0.00	0.00	0.13	0.25
testis, embryo E16.CNhs11033.470-26G5	6.03	2.33	1.94	0.78	0.58
thymus, adult.CNhs10471.38-12B5	6.00	0.95	0.00	0.00	0.63
thymus, embryo E16.CNhs11002.456-26C5	5.98	1.30	1.43	0.65	0.65
intestine, adult.CNhs10496.178-9A3	5.55	0.53	0.26	0.53	0.00
kidney, neonate N25.CNhs11122.1353-25F3	5.49	2.20	1.73	1.57	0.31
spleen, neonate N20.CNhs11112.824-19H1	5.47	0.27	0.14	0.41	0.00
olfactory brain, adult.CNhs10489.18-22I9	5.46	0.64	0.32	0.32	0.32
spinal cord, adult.CNhs10505.24-13C9	5.38	0.56	0.37	0.19	0.19
liver, embryo E13.CNhs10524.378-3H6	5.31	0.59	0.79	1.18	0.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	5.25	0.46	0.00	0.23	0.00
liver, neonate N07.CNhs11103.716-20H2	5.21	0.00	0.74	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	5.06	0.00	1.26	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	5.03	0.42	0.42	0.84	0.10
accessory axillary lymph node, adult.CNhs10475.1063-29H9	4.92	1.55	2.33	0.26	0.52
thymus, neonate N03.CNhs11137.2104-43C7	4.87	1.03	0.30	0.00	0.30
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	4.85	0.34	0.34	0.17	0.09
stomach, adult.CNhs10503.33-1H6	4.77	0.95	0.00	0.95	0.00
testis, embryo E18.CNhs11027.503-18G5	4.73	1.52	0.84	0.51	0.84
heart, neonate N16.CNhs11209.782-15G1	4.62	0.41	0.65	0.00	0.08
cortex, neonate N30.CNhs11107.1392-42F2	4.60	0.51	0.77	0.26	0.51
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	4.40	0.00	1.10	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	4.35	3.73	0.83	2.69	0.00
thymus, neonate N06.CNhs11197.681-26C4	4.34	0.50	0.50	0.30	0.30
liver, embryo E17.CNhs10510.481-18A3	4.33	0.51	0.51	0.51	0.00
forelimb, embryo E11.CNhs10596.335-25E2	4.31	2.37	1.51	1.08	0.65
hippocampus, neonate N00.CNhs11228.627-43G1	4.22	0.62	2.88	0.21	0.72
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	4.13	0.61	0.76	0.15	0.46
whole body, embryo E11.CNhs11014.324-5I8	4.05	1.66	1.04	1.04	0.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	3.94	0.56	0.56	0.00	0.56
liver, neonate N10.CNhs11115.751-24B9	3.74	0.00	0.00	0.31	0.00
medulla oblongata, adult.CNhs10477.17-12C2	3.69	0.16	0.80	0.32	0.96
spleen, neonate N25.CNhs11099.1354-25G3	3.66	0.46	0.23	0.23	0.00
heart, neonate N30.CNhs11202.1390-42D2	3.49	0.13	0.00	0.00	0.13
cortex, adult.CNhs10473.12-14D5	3.48	0.70	1.22	0.17	0.00
heart, neonate N25.CNhs11196.1351-25D3	3.29	0.00	0.00	0.22	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	3.24	0.97	0.00	0.32	0.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	3.19	0.26	0.64	0.13	0.38
medulla oblongata, neonate N30.CNhs11200.1396-42A3	3.16	0.12	0.47	0.12	0.82
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	3.15	1.35	0.00	0.00	0.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	3.12	0.00	0.00	0.00	0.55
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	3.11	0.85	0.57	0.28	0.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	3.02	0.00	0.00	0.00	0.76
thymus, neonate N07.CNhs11211.713-19D3	2.97	0.38	0.15	0.61	0.08
cerebellum, neonate N30.CNhs11135.1395-42I2	2.93	0.42	0.42	0.00	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	2.92	1.03	0.17	0.00	0.52
liver, neonate N25.CNhs11198.1368-26H1	2.87	0.18	0.00	0.00	0.18
thymus, neonate N10.CNhs11194.748-24E4	2.82	0.40	0.20	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	2.78	0.00	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	2.76	0.00	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	2.75	1.37	0.00	0.27	0.27
thymus, neonate N20.CNhs11186.820-7A2	2.73	0.29	0.10	0.00	0.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	2.70	0.00	0.00	0.00	0.68
thymus, neonate N30.CNhs11132.1393-42G2	2.69	0.12	0.35	0.12	0.23
thymus, neonate N02.CNhs11181.1541-43F8	2.64	1.08	0.36	0.48	0.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	2.60	0.52	1.56	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	2.47	0.00	0.00	0.00	0.22
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	2.45	0.22	0.45	0.67	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	2.39	1.67	1.19	0.24	1.43
liver, adult pregnant day01.CNhs10466.508-5B2	2.37	0.00	0.00	0.00	0.30
liver, embryo E12.CNhs10601.355-15F8	2.34	1.17	1.17	1.17	0.17
testis, embryo E15.CNhs11034.443-27C5	2.32	1.32	1.16	0.33	0.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	2.27	0.45	0.45	0.00	0.00
heart, neonate N20.CNhs11127.821-26I6	2.19	0.15	0.44	0.00	0.15
liver, embryo E16.CNhs10523.462-17F5	2.17	0.72	0.48	0.72	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	2.16	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	2.07	0.52	0.52	0.00	0.52
spleen, adult.CNhs10465.25-2G2	2.05	0.34	0.00	0.17	0.00
thymus, neonate N25.CNhs11125.1362-25G7	2.02	0.38	0.19	0.10	0.10
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	1.97	0.21	0.31	0.10	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	1.97	1.27	1.55	0.56	0.42
mammary gland, adult lactating day02.CNhs10480.595-22B6	1.97	0.00	0.00	0.00	2.46
testis, neonate N20.CNhs11110.839-18H3	1.93	0.24	0.48	0.24	0.00
liver, embryo E15.CNhs10520.433-16D7	1.83	0.00	0.20	0.41	0.00
corpora quadrigemina, adult.CNhs10501.16-22A4	1.80	0.30	0.60	0.15	0.45
testis, embryo E13.CNhs11031.389-23F5	1.79	1.20	1.79	0.30	0.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	1.77	0.25	0.00	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	1.76	0.59	0.59	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	1.74	0.00	0.00	0.29	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	1.72	0.00	0.00	0.00	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	1.69	0.15	0.46	0.15	0.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	1.68	1.05	0.42	0.21	0.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	1.68	0.28	1.12	0.00	0.56
hippocampus, adult.CNhs10478.13-16E8	1.68	0.21	1.05	0.00	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	1.62	0.41	0.27	0.27	0.27
diencephalon, adult.CNhs10482.20-12F2	1.45	0.42	0.00	0.00	0.21
liver, neonate N30.CNhs11106.1382-42D1	1.45	0.48	0.00	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	1.44	1.44	0.00	1.15	0.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	1.38	1.38	0.00	0.00	0.00
corpus striatum, adult.CNhs10487.19-21D8	1.37	0.00	0.00	0.00	0.46
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	1.37	0.00	0.00	0.69	0.69
pancreas, adult.CNhs10486.34-16E4	1.33	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	1.30	0.00	0.00	0.00	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	1.13	0.25	0.13	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	1.13	2.26	0.56	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	1.03	0.00	0.00	0.00	0.00
pituitary gland, adult.CNhs10493.21-1G8	1.02	0.00	0.34	0.00	0.34
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	1.01	0.00	0.00	0.00	0.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	0.92	0.92	0.00	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	0.92	0.79	0.40	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.91	0.00	0.00	0.45	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	0.82	0.37	0.91	0.27	0.37
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.80	0.00	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.76	0.00	0.25	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.70	0.00	0.00	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.66	0.00	0.00	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	0.62	0.62	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	0.61	0.24	0.00	0.12	0.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.60	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	0.57	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.51	0.00	0.00	0.51	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.46	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.45	0.09	0.00	0.09	0.09
Mouse Granule cells, donor1.CNhs12131.11713-123C3	0.40	0.00	0.61	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.38	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.28	0.14	0.28	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.28	0.00	0.14	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.22	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.17	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.12	0.00	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	0.10	0.10	0.00	0.10	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	0.00	0.00	0.00	0.00	1.59
Mouse Granule cells, donor3.CNhs12108.11636-122C7	0.00	1.27	0.63	1.27	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.45	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	0.00	0.00	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00	0.22

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p1@Col12a1
p2@Col12a1
p3@Col12a1
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p5@Col12a1

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	12816
LocusTag:	-
chromosome:	9
map location:	9 E1, 9 43.0 cM, 9 E1;;9 43.0 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Col12a1
Full name from nomenclature authority:	collagen, type XII, alpha 1
Nomenclature status:	O
Other designations:	collagen alpha-1(XII) chain, procollagen, type XII, alpha 1, collagen alpha-1(XII) chain;;procollagen, type XII, alpha 1
Modification date:	18.11.2011