EntrezGene:15165

Symbol:	Hcn1
Description:	hyperpolarization-activated, cyclic nucleotide-gated K+ 1
Synonyms:	Bcng1, C630013B14Rik, HAC2
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:15165 MGI:1096392 Ensembl:ENSMUSG00000021730 Vega:OTTMUSG00000035649
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr13:118390634..118390639,+	p9@Hcn1
Mm9::chr13:118391116..118391132,+	p2@Hcn1
Mm9::chr13:118391138..118391145,+	p4@Hcn1
Mm9::chr13:118391246..118391289,+	p1@Hcn1
Mm9::chr13:118391309..118391320,+	p3@Hcn1
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Hcn1	p2@Hcn1	p3@Hcn1	p4@Hcn1

Sample	p1@Hcn1	p2@Hcn1	p3@Hcn1	p4@Hcn1
eyeball, neonate N16.CNhs11188.777-19A2	89.25	17.07	3.62	1.03
eyeball, adult.CNhs10484.31-12G4	51.35	8.21	1.05	0.42
cortex, adult.CNhs10473.12-14D5	46.24	1.04	2.61	0.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	46.08	4.14	9.32	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	46.02	51.46	7.48	3.40
hippocampus, adult.CNhs10478.13-16E8	45.84	1.26	5.05	0.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	44.65	1.84	2.76	0.92
cortex, neonate N30.CNhs11107.1392-42F2	43.47	2.56	6.39	0.77
cerebellum, adult.CNhs10494.15-8B2	43.04	2.64	2.05	0.29
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	42.92	3.39	3.95	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	42.31	2.51	4.19	1.26
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	41.55	2.27	4.53	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	39.73	2.06	4.80	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	39.15	2.03	4.05	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	38.28	1.35	4.05	0.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	37.81	1.15	4.01	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	37.16	2.72	5.89	0.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	36.43	1.72	2.92	0.34
corpora quadrigemina, adult.CNhs10501.16-22A4	35.35	1.35	5.99	0.45
olfactory brain, adult.CNhs10489.18-22I9	32.77	2.57	4.18	0.64
medulla oblongata, adult.CNhs10477.17-12C2	31.79	1.28	6.10	0.32
eyeball, neonate N02.CNhs11205.1551-44G8	28.20	6.00	5.62	1.03
medulla oblongata, neonate N30.CNhs11200.1396-42A3	27.54	1.41	4.57	0.47
diencephalon, neonate N30.CNhs11201.1388-42B2	26.28	1.62	4.22	0.49
spinal cord, adult.CNhs10505.24-13C9	25.77	2.04	7.05	0.56
hippocampus, neonate N00.CNhs11228.627-43G1	25.31	0.93	2.47	0.41
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	24.75	0.46	5.81	0.31
corpus striatum, adult.CNhs10487.19-21D8	22.88	0.92	4.12	0.92
eyeball, neonate N01.CNhs11140.1532-43E7	22.16	3.84	2.31	0.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	18.59	0.46	2.30	0.00
diencephalon, adult.CNhs10482.20-12F2	18.29	0.42	1.87	0.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	17.45	0.56	2.25	0.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	15.63	0.56	3.07	0.28
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	13.79	0.26	0.64	0.13
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	13.21	0.00	0.00	0.00
eyeball, neonate N00.CNhs11207.633-15C6	12.72	2.59	1.97	0.27
Mouse Schwann, donor1.CNhs12507.11728-123D9	11.81	5.53	1.67	0.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	10.11	0.43	0.28	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	10.00	0.57	0.29	0.00
urinary bladder, adult.CNhs10481.879-12E4	9.66	1.55	3.09	0.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	9.44	0.51	1.62	0.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	7.95	0.88	0.00	0.22
corpus striatum, neonate N00.CNhs11226.630-43F1	7.04	0.13	0.25	0.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	6.78	0.88	0.88	0.29
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	6.52	0.19	0.56	0.19
pituitary gland, embryo E14.CNhs11037.398-44A5	5.79	1.07	1.50	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	4.08	0.00	0.89	0.18
eyeball, embryo E17.CNhs11023.1261-18D4	4.07	1.21	2.26	0.00
whole body, embryo E17.CNhs10517.475-3I5	4.00	0.00	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	3.96	0.25	0.49	0.00
lung, embryo E12.CNhs10522.354-16G2	3.79	0.57	0.19	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	3.62	0.33	0.49	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	3.44	0.24	0.36	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	3.39	0.36	0.36	0.00
heart, neonate N25.CNhs11196.1351-25D3	3.29	1.32	1.10	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	3.11	0.44	0.44	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	3.10	0.24	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	2.89	0.00	0.96	0.00
eyeball, embryo E15.CNhs10593.426-16C9	2.88	0.36	0.72	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	2.88	0.41	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	2.82	0.81	1.21	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	2.82	0.19	0.38	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	2.74	0.00	0.30	0.00
heart, neonate N16.CNhs11209.782-15G1	2.68	0.32	0.41	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	2.63	0.00	0.62	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	2.58	1.55	0.52	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	2.56	0.18	0.73	0.00
lung, neonate N10.CNhs11219.750-23E6	2.55	0.16	0.48	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	2.54	0.28	0.14	0.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	2.50	0.50	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	2.50	0.44	0.15	0.00
lung, embryo E14.CNhs10604.404-26F8	2.44	0.16	0.33	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	2.36	0.20	0.39	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	2.31	0.54	0.68	0.14
eyeball, embryo E14.CNhs10521.399-16E2	2.30	0.00	0.46	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	2.28	0.51	0.25	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	2.28	0.51	0.42	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	2.27	0.41	0.00	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	2.12	0.00	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	2.11	0.13	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	2.11	0.06	0.06	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	2.06	0.69	1.03	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	2.02	0.00	0.20	0.00
lung, neonate N07.CNhs11111.715-19A3	1.99	0.89	0.00	0.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	1.97	0.28	0.28	0.00
eyeball, embryo E12.CNhs11016.345-16C6	1.95	0.26	0.00	0.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	1.95	0.29	0.29	0.00
whole body, embryo E14.5.CNhs10578.420-27D2	1.94	0.00	0.24	0.00
heart, neonate N20.CNhs11127.821-26I6	1.90	0.29	0.00	0.00
lung, neonate N06.CNhs11212.683-20E5	1.89	0.00	0.00	0.16
lung, embryo E15.CNhs11020.432-17C5	1.87	0.34	0.34	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	1.87	0.28	0.28	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	1.84	0.00	0.26	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	1.77	0.00	0.53	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	1.73	0.29	0.58	0.00
lung, neonate N25.CNhs11119.1359-25C7	1.73	0.86	0.00	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	1.71	0.00	0.37	0.00
ovary, adult.CNhs10507.91-2I7	1.70	1.14	0.28	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	1.70	0.19	0.57	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	1.68	0.56	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	1.64	0.82	0.33	0.00
whole body, embryo E18.CNhs10516.493-3B3	1.64	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	1.62	0.00	0.35	0.12
whole body, embryo E12.CNhs10587.857-27C9	1.60	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	1.60	0.32	0.64	0.00
stomach, embryo E12.CNhs10588.356-43E3	1.58	0.00	0.32	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	1.56	0.00	0.00	0.00
intestine, neonate N10.CNhs11098.755-23A5	1.56	0.00	0.39	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	1.51	0.91	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	1.45	0.15	0.15	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	1.44	1.44	0.00	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	1.42	0.39	0.26	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	1.39	0.69	0.35	0.00
forelimb, embryo E15.CNhs11007.437-20E7	1.39	0.00	0.00	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	1.39	0.00	0.35	0.00
thymus, embryo E18.CNhs10595.1273-19G4	1.39	0.60	0.60	0.00
thymus, neonate N07.CNhs11211.713-19D3	1.37	0.23	0.30	0.00
whole body, embryo E13.CNhs10512.372-23H2	1.37	0.51	0.17	0.00
pituitary gland, adult.CNhs10493.21-1G8	1.36	0.00	0.34	0.00
intestine, embryo E15.CNhs10602.976-16D8	1.29	0.00	0.00	0.00
whole body, neonate N00.CNhs10525.657-19C2	1.29	0.21	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	1.26	0.25	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	1.24	0.00	0.21	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	1.23	0.41	0.41	0.00
stomach, embryo E15.CNhs10603.1252-16G8	1.22	0.00	0.00	0.20
lung, embryo E18.CNhs10583.1287-20I6	1.19	0.00	0.24	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	1.17	0.23	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	1.16	1.16	0.23	0.23
whole body, embryo E17.5.CNhs10513.490-9F9	1.16	0.00	0.19	0.00
intestine, neonate N01.CNhs11192.1322-23E9	1.15	0.16	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	1.05	0.00	0.12	0.00
thymus, neonate N03.CNhs11137.2104-43C7	1.03	0.00	0.15	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	1.01	0.17	0.50	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	1.01	0.09	0.00	0.00
intestine, neonate N30.CNhs11131.1384-42G1	1.00	0.20	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.99	0.00	0.00	0.00
whole body, neonate N01.CNhs10576.659-23C6	0.96	0.38	0.19	0.00
intestine, embryo E18.CNhs10526.1289-20F7	0.95	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	0.92	0.00	0.00	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	0.92	0.23	0.23	0.00
whole body, embryo E16.CNhs10514.453-14F2	0.92	0.18	0.18	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.91	0.00	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	0.90	0.18	0.00	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.89	0.00	0.22	0.00
lung, neonate N20.CNhs11109.822-18A4	0.82	0.82	0.33	0.00
thymus, neonate N06.CNhs11197.681-26C4	0.81	0.40	0.10	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	0.79	0.40	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.76	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	0.76	0.25	0.00	0.00
lung, adult.CNhs10474.28-22B1	0.74	0.18	0.55	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.72	0.48	0.00	0.00
thymus, embryo E17.CNhs10581.478-18C1	0.72	0.36	0.36	0.00
heart, embryo E14.CNhs10597.403-26D4	0.71	0.00	0.00	0.00
ovary, embryo E18.CNhs11040.505-44H7	0.71	0.36	0.18	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	0.71	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.70	0.00	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	0.70	0.23	0.23	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.69	0.00	0.46	0.23
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	0.69	0.00	0.46	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.68	0.00	0.00	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	0.68	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	0.67	0.00	0.19	0.00
lung, embryo E17.CNhs10605.480-44A6	0.67	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.67	0.67	0.00	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.66	0.16	0.00	0.00
whole body, neonate N06.CNhs10515.692-21D1	0.66	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	0.65	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.64	0.48	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	0.63	0.00	0.00	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	0.63	0.00	0.21	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.63	0.00	0.00	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	0.62	0.00	0.10	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.61	0.00	0.31	0.00
thymus, embryo E14.CNhs11041.402-44I4	0.61	0.00	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.60	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	0.58	0.29	0.00	0.29
small intestine, neonate N16.CNhs11114.790-21I1	0.58	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.58	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.57	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.57	0.00	0.28	0.00
pancreas, embryo E16.CNhs11003.460-26E5	0.57	0.00	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.54	0.27	0.00	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	0.54	0.00	0.18	0.18
stomach, neonate N03.CNhs11193.1340-24B8	0.54	0.00	0.00	0.00
forelimb, embryo E13.CNhs10589.384-1E2	0.53	0.18	0.35	0.00
intestine, adult.CNhs10496.178-9A3	0.53	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.50	0.00	0.00	0.00
ovary, neonate N00.CNhs11217.1299-22I4	0.49	0.33	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	0.48	0.24	0.24	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	0.47	0.00	0.00	0.00
heart, embryo E17.CNhs11025.479-18E5	0.47	0.00	0.23	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.47	0.00	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	0.47	0.23	0.23	0.23
whole body, neonate N10.CNhs10518.761-6B4	0.46	0.00	0.70	0.00
tongue, adult.CNhs10499.32-1B4	0.45	0.68	0.00	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	0.44	0.00	0.00	0.00
forelimb, embryo E14.CNhs10577.413-26A8	0.44	0.22	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.43	0.00	0.00	0.00
intestine, neonate N25.CNhs11121.1352-25E3	0.43	0.00	0.00	0.00
stomach, embryo E16.CNhs11022.459-17D4	0.43	0.11	0.00	0.00
vagina, adult.CNhs10502.89-27D5	0.43	0.00	0.00	0.00
whole body, embryo E14.CNhs10519.395-14B1	0.42	0.21	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.41	0.82	0.20	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	0.41	0.00	0.10	0.00
thymus, neonate N10.CNhs11194.748-24E4	0.40	0.10	0.30	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	0.39	0.00	0.00	0.00
forelimb, embryo E12.CNhs10600.359-14H2	0.38	0.57	0.38	0.00
thymus, neonate N30.CNhs11132.1393-42G2	0.35	0.00	0.00	0.00
testis, embryo E18.CNhs11027.503-18G5	0.34	0.00	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	0.33	0.00	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.33	0.33	0.16	0.00
skin, neonate N10.CNhs11108.762-6C4	0.33	0.00	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	0.32	0.16	0.00	0.00
skin, neonate N00.CNhs11124.650-25G4	0.32	0.00	0.16	0.00
thymus, adult.CNhs10471.38-12B5	0.32	0.00	0.00	0.00
heart, embryo E16.CNhs11021.457-17C6	0.31	0.00	0.00	0.00
thymus, embryo E15.CNhs11005.430-45I2	0.31	0.10	0.10	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	0.30	0.30	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	0.30	0.30	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.29	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	0.26	0.26	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.26	0.00	0.26	0.00
pancreas, neonate N00.CNhs11105.645-26G9	0.26	0.52	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	0.25	0.00	0.00	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.25	0.00	0.00	0.00
pancreas, embryo E14.CNhs11012.405-44F4	0.24	0.24	0.00	0.00
kidney, embryo E15.CNhs10997.434-16F8	0.23	0.11	0.11	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.22	0.00	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	0.22	0.00	0.00	0.00
prostate, adult.CNhs10470.859-1F8	0.22	0.22	0.00	0.22
forelimb, embryo E18.CNhs11008.1520-43B5	0.21	0.21	0.21	0.00
kidney, neonate N00.CNhs11214.646-21G7	0.21	0.00	0.00	0.00
stomach, embryo E17.CNhs11006.1035-18D5	0.21	0.00	0.21	0.00
gonad, embryo E13.CNhs11044.1564-45I6	0.20	0.00	0.00	0.00
heart, embryo E15.CNhs11017.431-16C8	0.20	0.00	0.20	0.00
intestine, embryo E16.CNhs10585.463-22H4	0.20	0.00	0.00	0.00
intestine, neonate N07.CNhs11095.720-20F2	0.20	0.00	0.20	0.00
lung, neonate N00.CNhs11224.640-42C6	0.20	0.20	0.20	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.19	0.00	0.00	0.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	0.19	0.00	0.00	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.19	0.00	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	0.19	0.00	0.10	0.00
thymus, neonate N25.CNhs11125.1362-25G7	0.19	0.00	0.29	0.00
spleen, adult.CNhs10465.25-2G2	0.17	0.00	0.00	0.00
stomach, neonate N30.CNhs11134.1386-42I1	0.13	0.00	0.13	0.00
testis, embryo E17.CNhs11029.486-18I5	0.13	0.00	0.00	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	0.12	0.00	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.12	0.00	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	0.12	0.00	0.00	0.00
skin, neonate N06.CNhs11097.693-20I5	0.12	0.00	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	0.10	0.00	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	0.00	0.00	0.00	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.89	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	0.00	0.00	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	0.00	0.00	0.00	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	0.00	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.00	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	0.00	0.00	0.00	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	0.00	0.00	0.00	0.00
aorta, adult.CNhs10498.46-23H1	0.00	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	0.00	0.00	0.00	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	0.00	0.00	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.00	0.00	0.00	0.00
cecum, adult.CNhs10467.37-13H4	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00	0.00
epididymis, adult.CNhs10490.58-23B2	0.00	0.00	0.00	0.00
forelimb, embryo E11.CNhs10596.335-25E2	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00	0.00
intestine, embryo E12.CNhs11019.1251-16I5	0.00	0.21	0.00	0.00
intestine, neonate N20.CNhs11187.827-18D1	0.00	0.00	0.00	0.00
kidney, embryo E16.CNhs10584.464-22A5	0.00	0.00	0.00	0.00
kidney, embryo E17.CNhs11028.483-18I2	0.00	0.00	0.20	0.00
kidney, embryo E18.CNhs11001.1288-20C7	0.00	0.00	0.00	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.00	0.00	0.00	0.00
kidney, neonate N20.CNhs11113.832-19I1	0.00	0.00	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	0.00	0.00	0.00	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.00	0.00	0.00
liver, embryo E13.CNhs10524.378-3H6	0.00	0.00	0.20	0.00
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	0.00	0.00	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	0.00	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	0.00	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	0.00	0.00	0.00	0.00
liver, neonate N07.CNhs11103.716-20H2	0.00	0.00	0.00	0.00
liver, neonate N10.CNhs11115.751-24B9	0.00	0.00	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	0.00	0.00	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	0.00	0.00	0.00	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.00	0.00	0.00	0.00
lung, neonate N30.CNhs11133.1394-42H2	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.00	0.00	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	0.00	0.00	0.00	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	0.00	0.00	0.00	0.00
pancreas, adult.CNhs10486.34-16E4	0.00	0.00	0.00	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.00	0.00	0.00	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	0.00	0.00	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	0.00	0.00	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	0.00	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	0.00	0.00	0.00	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.00	0.00	0.00	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.00	0.00	0.00
skin, adult.CNhs10492.30-1C3	0.00	0.16	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	0.00	0.21	0.21	0.00
spleen, embryo E18.CNhs11011.1271-21F2	0.00	0.00	0.00	0.00
spleen, neonate N10.CNhs11116.752-24D1	0.00	0.00	0.00	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.00	0.00	0.00	0.00
spleen, neonate N25.CNhs11099.1354-25G3	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.00	0.00	0.00	0.00
stomach, adult.CNhs10503.33-1H6	0.00	0.00	0.00	0.00
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.22	0.00	0.00
stomach, neonate N25.CNhs11104.1355-25E4	0.00	0.00	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	0.00	0.00	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.00	0.00
testis, embryo E13.CNhs11031.389-23F5	0.00	0.00	0.00	0.00
testis, embryo E15.CNhs11034.443-27C5	0.00	0.00	0.00	0.00
testis, embryo E16.CNhs11033.470-26G5	0.00	0.00	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.00	0.00	0.12	0.00
testis, neonate N07.CNhs11222.726-26I4	0.00	0.00	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	0.00	0.00	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.00	0.00	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	0.00	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.00	0.00	0.09	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.00	0.00	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	0.00	0.00	0.00	0.00
uterus, adult.CNhs10509.92-27E5	0.00	0.00	0.00	0.00
vesicular gland, adult.CNhs10491.51-27F8	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	0.00	0.95	0.48	0.00

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p1@Hcn1
p2@Hcn1
p3@Hcn1
p4@Hcn1

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	15165
LocusTag:	-
chromosome:	13
map location:	13 D2.3, 13 67.0 cM, 13 D2.3;;13 67.0 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Hcn1
Full name from nomenclature authority:	hyperpolarization-activated, cyclic nucleotide-gated K+ 1
Nomenclature status:	O
Other designations:	BCNG-1, HAC-2, brain cyclic nucleotide-gated channel 1, hyperpolarization-activated cation channel 2, potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, BCNG-1;;HAC-2;;brain cyclic nucleotide-gated channel 1;;hyperpolarization-activated cation channel 2;;potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Modification date:	15.01.2012