EntrezGene:30938

Symbol:	Fgd3
Description:	FYVE, RhoGEF and PH domain containing 3
Synonyms:	5830461L01Rik, ZFYVE5
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:30938 MGI:1353657 Ensembl:ENSMUSG00000037946 Vega:OTTMUSG00000020966
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr13:49394018..49394026,-	p8@Fgd3
Mm9::chr13:49394047..49394066,-	p4@Fgd3
Mm9::chr13:49394171..49394182,-	p7@Fgd3
Mm9::chr13:49404567..49404583,-	p5@Fgd3
Mm9::chr13:49404586..49404626,-	p2@Fgd3
Mm9::chr13:49415568..49415587,-	p3@Fgd3
Mm9::chr13:49415588..49415658,-	p1@Fgd3
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Fgd3	p2@Fgd3	p3@Fgd3	p4@Fgd3	p5@Fgd3

Sample	p1@Fgd3	p2@Fgd3	p3@Fgd3	p4@Fgd3	p5@Fgd3
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	35.55	0.00	7.11	0.00	0.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	27.41	0.00	6.61	0.19	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	25.67	0.00	12.83	0.00	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	24.94	0.00	18.52	0.00	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	23.90	0.00	1.84	0.00	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	18.23	0.00	5.93	0.22	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	15.96	0.00	1.38	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	14.39	0.00	2.40	0.00	0.00
olfactory brain, adult.CNhs10489.18-22I9	13.50	0.00	3.21	0.00	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	12.86	0.00	5.51	0.00	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	12.86	0.00	1.85	0.10	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	12.46	0.00	4.25	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	12.10	0.00	3.58	0.17	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	11.93	0.00	1.10	7.34	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	11.50	0.00	1.44	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	10.79	2.10	3.60	0.00	1.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	10.19	0.00	2.55	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	10.16	0.00	2.64	0.00	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	9.97	0.00	2.84	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	9.91	0.00	2.20	0.00	1.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	9.58	0.00	6.23	0.00	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	9.38	0.00	3.13	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	9.27	0.19	10.94	0.00	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	8.91	0.69	0.69	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	8.87	0.00	0.00	0.00	0.00
medulla oblongata, adult.CNhs10477.17-12C2	8.67	0.00	8.19	0.00	0.32
diencephalon, adult.CNhs10482.20-12F2	8.52	0.42	4.36	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	8.05	0.00	0.78	0.00	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	7.95	0.30	2.95	0.08	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	7.83	0.15	4.92	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	7.77	0.00	3.18	0.35	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	7.58	0.00	3.56	0.22	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	7.33	0.42	6.91	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	7.32	0.29	7.61	0.00	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	7.30	0.77	3.46	0.00	0.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	7.25	0.00	2.27	0.00	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	7.18	0.15	5.35	0.15	0.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	6.75	0.00	1.62	0.00	0.14
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	6.70	0.84	5.86	0.00	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	6.64	0.00	4.21	0.00	0.13
diencephalon, neonate N30.CNhs11201.1388-42B2	6.49	0.32	4.38	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	6.41	0.00	3.31	0.22	0.00
ovary, adult.CNhs10507.91-2I7	6.39	0.85	2.41	1.28	0.43
corpora quadrigemina, adult.CNhs10501.16-22A4	5.99	0.15	2.70	0.00	0.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	5.89	0.29	0.88	0.00	0.00
cortex, neonate N30.CNhs11107.1392-42F2	5.88	0.51	2.81	0.00	0.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	5.78	0.00	1.12	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	5.66	0.00	1.42	0.00	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	5.63	0.12	12.31	0.00	0.59
pituitary gland, embryo E13.CNhs11009.370-44C7	5.56	0.00	2.07	0.00	0.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	5.52	0.00	0.92	0.00	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	5.50	0.00	1.56	0.00	0.10
corpus striatum, adult.CNhs10487.19-21D8	5.49	0.46	2.29	0.00	0.46
Mouse Granule cells, donor2.CNhs12357.11731-123E3	5.29	0.00	0.53	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	5.29	0.00	3.02	0.00	1.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	5.16	0.17	1.72	0.00	0.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	5.13	0.00	1.28	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	5.07	0.00	1.52	19.00	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	4.86	0.29	4.57	0.00	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	4.84	0.00	0.84	0.00	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	4.73	0.00	2.70	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	4.59	0.00	0.33	0.33	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	4.58	0.00	2.29	0.00	0.00
cortex, adult.CNhs10473.12-14D5	4.52	0.17	2.26	0.00	0.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	4.50	0.00	1.69	0.00	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	4.32	0.00	1.08	0.00	0.00
tongue, adult.CNhs10499.32-1B4	4.31	0.23	2.95	0.23	0.00
adrenal gland, adult.CNhs10508.49-24D7	4.30	0.74	0.00	0.30	0.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	4.29	0.00	0.48	0.00	0.00
whole body, embryo E17.CNhs10517.475-3I5	4.00	0.00	1.50	0.25	0.00
whole body, embryo E12.CNhs10587.857-27C9	3.99	0.40	1.60	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	3.95	0.56	3.39	0.00	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	3.92	0.00	1.68	0.00	0.00
pituitary gland, embryo E14.CNhs11037.398-44A5	3.86	0.21	1.07	0.00	0.00
eyeball, neonate N00.CNhs11207.633-15C6	3.67	0.14	1.70	0.14	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	3.54	0.00	0.51	16.68	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	3.37	0.56	1.12	0.00	0.56
pituitary gland, embryo E17.CNhs11039.1265-44F5	3.29	0.00	0.82	0.00	0.16
whole body, embryo E13.CNhs10512.372-23H2	3.24	0.17	1.37	0.00	0.17
whole body, embryo E16.CNhs10514.453-14F2	3.13	0.00	0.37	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	3.11	0.00	0.52	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	3.09	1.03	0.00	0.00	0.34
eyeball, neonate N01.CNhs11140.1532-43E7	3.07	0.00	1.41	0.13	0.00
whole body, neonate N10.CNhs10518.761-6B4	3.01	1.16	1.16	0.23	1.85
eyeball, neonate N02.CNhs11205.1551-44G8	3.00	0.00	0.84	0.00	0.00
eyeball, embryo E14.CNhs10521.399-16E2	2.99	0.23	0.69	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	2.94	0.00	0.51	6.39	0.00
whole body, embryo E14.CNhs10519.395-14B1	2.93	0.00	0.63	0.21	0.00
eyeball, embryo E12.CNhs11016.345-16C6	2.86	0.00	0.91	0.26	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	2.85	0.14	0.27	0.68	0.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	2.81	0.00	0.87	18.40	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	2.78	0.00	0.76	0.00	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	2.74	0.00	0.30	0.00	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	2.70	0.39	0.19	0.19	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	2.62	0.19	0.47	0.09	0.09
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	2.62	0.29	1.89	0.15	0.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	2.53	0.00	0.25	0.51	0.25
adrenal gland, neonate N25.CNhs11223.1377-27I3	2.51	0.25	0.00	0.00	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	2.47	0.21	0.21	0.00	0.62
forelimb, embryo E12.CNhs10600.359-14H2	2.46	0.19	0.19	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	2.46	0.82	0.41	0.00	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	2.41	0.30	1.21	0.00	0.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	2.37	0.00	0.40	1.58	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	2.37	0.17	0.85	0.25	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	2.37	0.00	0.00	0.00	0.00
whole body, neonate N00.CNhs10525.657-19C2	2.36	0.00	0.43	0.21	0.21
whole body, embryo E18.CNhs10516.493-3B3	2.34	0.47	0.47	0.00	0.23
hippocampus, adult.CNhs10478.13-16E8	2.31	0.00	2.73	0.00	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	2.31	0.18	0.35	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	2.30	0.13	0.83	0.13	0.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	2.27	0.00	0.50	4.66	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	2.25	4.95	1.35	0.45	4.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	2.25	0.00	0.00	0.64	0.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	2.21	0.00	0.32	0.32	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	2.15	0.00	1.43	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	2.13	7.82	2.13	0.71	2.13
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	2.09	0.12	0.46	0.23	0.35
adrenal gland, embryo E17.CNhs11043.1263-45I1	2.08	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	2.06	0.15	0.00	0.29	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	2.01	0.18	0.91	0.37	0.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	1.98	5.93	1.98	0.00	4.94
eyeball, embryo E15.CNhs10593.426-16C9	1.98	0.00	2.88	0.00	0.18
adrenal gland, embryo E18.CNhs11026.1262-18F5	1.96	0.30	0.45	0.15	0.30
lung, embryo E14.CNhs10604.404-26F8	1.96	0.00	0.00	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	1.94	1.13	0.32	0.00	0.97
bone (os femoris), neonate N20.CNhs11195.1350-25C3	1.94	1.45	1.94	0.48	1.94
whole body, embryo E14.5.CNhs10578.420-27D2	1.94	0.24	0.49	0.00	0.49
intestine, embryo E12.CNhs11019.1251-16I5	1.92	0.00	0.21	0.43	0.00
stomach, embryo E12.CNhs10588.356-43E3	1.90	0.00	0.32	0.00	0.16
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	1.90	0.24	0.47	0.12	0.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	1.89	0.19	0.57	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	1.86	0.00	0.00	0.23	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	1.86	0.46	0.15	0.31	0.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	1.84	0.23	0.52	0.00	0.17
eyeball, neonate N16.CNhs11188.777-19A2	1.81	0.00	0.78	1.03	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	1.80	0.45	1.35	0.00	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	1.78	0.18	0.71	0.00	0.00
forelimb, embryo E13.CNhs10589.384-1E2	1.76	0.00	0.18	0.00	0.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	1.69	0.00	0.14	0.00	0.00
testis, adult.CNhs10504.57-7G5	1.69	0.00	0.00	0.00	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	1.65	0.12	0.24	0.35	0.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	1.62	0.85	0.51	1.36	0.60
bone (os femoris), neonate N16.CNhs11225.1525-43A6	1.55	3.53	0.88	0.44	2.87
forelimb, embryo E11.CNhs10596.335-25E2	1.51	0.00	0.00	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	1.51	0.50	0.25	0.00	0.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	1.51	0.00	0.43	0.00	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	1.49	4.23	0.87	0.37	2.11
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	1.46	0.00	0.00	0.58	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	1.43	0.48	0.00	0.00	0.24
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	1.42	0.18	0.89	0.35	0.71
whole body, embryo E11.CNhs11014.324-5I8	1.35	0.00	0.31	0.21	0.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	1.33	0.00	0.44	0.22	0.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	1.32	0.19	0.66	0.38	0.00
eyeball, adult.CNhs10484.31-12G4	1.26	0.00	0.00	1.05	0.42
adrenal gland, embryo E16.CNhs11004.1254-43D6	1.22	0.00	0.30	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	1.21	0.00	0.40	0.81	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	1.18	0.10	0.89	0.10	0.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	1.17	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	1.09	4.57	0.40	1.19	2.68
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	1.09	6.53	0.00	4.35	13.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	1.04	1.83	0.78	1.31	3.66
adrenal gland, embryo E14.CNhs11038.406-44C5	1.04	0.17	0.17	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	1.04	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	1.03	0.00	0.51	2.32	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	1.03	0.00	0.00	1.03	0.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	0.98	0.98	0.70	0.14	0.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	0.96	0.77	0.39	0.00	0.19
whole body, neonate N01.CNhs10576.659-23C6	0.96	0.96	0.57	0.00	0.77
stomach, adult.CNhs10503.33-1H6	0.95	0.00	0.00	0.95	0.00
intestine, neonate N20.CNhs11187.827-18D1	0.90	1.80	0.00	0.00	3.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.89	0.00	0.89	0.00	0.00
kidney, neonate N20.CNhs11113.832-19I1	0.89	0.00	0.15	2.36	0.15
skin, adult.CNhs10492.30-1C3	0.82	0.99	0.82	0.00	0.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	0.82	0.41	1.24	0.41	0.41
kidney, neonate N25.CNhs11122.1353-25F3	0.78	0.31	0.00	3.92	0.00
lung, embryo E12.CNhs10522.354-16G2	0.76	0.00	0.19	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.74	0.62	0.00	2.34	0.12
uterus, adult.CNhs10509.92-27E5	0.73	0.73	0.00	16.12	0.73
heart, embryo E14.CNhs10597.403-26D4	0.71	0.00	0.00	0.00	0.24
heart, embryo E12.CNhs11015.353-12F5	0.70	0.23	0.00	0.00	0.00
kidney, embryo E15.CNhs10997.434-16F8	0.69	0.23	0.00	0.57	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.68	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.67	3.66	0.00	0.00	0.33
forelimb, embryo E14.CNhs10577.413-26A8	0.66	0.00	0.22	0.00	0.22
gonad, embryo E13.CNhs11044.1564-45I6	0.60	0.00	0.00	0.20	0.00
forelimb, embryo E15.CNhs11007.437-20E7	0.56	0.00	0.00	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	0.56	0.75	0.00	9.01	0.19
lung, embryo E15.CNhs11020.432-17C5	0.51	0.00	0.51	0.00	0.00
spleen, adult.CNhs10465.25-2G2	0.51	7.52	0.00	1.03	2.56
oviduct, adult pregnant day01.CNhs10500.988-6G6	0.49	0.99	0.00	3.13	1.65
pancreas, embryo E14.CNhs11012.405-44F4	0.49	0.24	0.00	1.21	0.24
testis, neonate N20.CNhs11110.839-18H3	0.48	0.00	0.48	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.47	0.00	0.00	0.12	0.00
vagina, adult.CNhs10502.89-27D5	0.43	0.21	0.21	6.43	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	0.41	0.20	0.00	0.71	0.00
stomach, embryo E15.CNhs10603.1252-16G8	0.41	0.20	0.00	0.20	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.38	0.00	0.00	0.38	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.38	0.19	0.06	2.40	0.19
heart, embryo E13.CNhs11013.376-3I9	0.36	0.00	0.00	0.00	0.18
pancreas, neonate N01.CNhs11138.1531-43D7	0.36	0.00	0.00	0.73	0.00
lung, embryo E17.CNhs10605.480-44A6	0.34	0.17	0.00	0.00	0.00
testis, embryo E18.CNhs11027.503-18G5	0.34	0.00	0.17	0.17	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.34	0.00	0.00	2.35	0.00
ovary, neonate N00.CNhs11217.1299-22I4	0.33	0.16	0.16	0.33	0.16
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.29	0.29	0.00	1.15	0.00
stomach, neonate N03.CNhs11193.1340-24B8	0.27	0.40	0.00	0.54	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.25	0.00	0.00	12.11	0.00
liver, embryo E17.CNhs10510.481-18A3	0.25	0.76	0.00	0.51	0.76
skin, neonate N06.CNhs11097.693-20I5	0.24	0.12	0.12	0.00	0.36
heart, embryo E17.CNhs11025.479-18E5	0.23	0.23	0.00	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	0.23	0.23	0.00	0.00	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.22	0.22	0.00	0.22	0.00
prostate, adult.CNhs10470.859-1F8	0.22	0.22	0.00	0.00	0.00
whole body, neonate N06.CNhs10515.692-21D1	0.22	0.44	0.66	0.00	0.44
forelimb, embryo E18.CNhs11008.1520-43B5	0.21	0.21	0.00	0.00	0.21
stomach, embryo E17.CNhs11006.1035-18D5	0.21	0.00	0.21	0.21	0.00
testis, neonate N10.CNhs11204.763-44D9	0.21	0.00	0.10	0.00	0.00
intestine, embryo E16.CNhs10585.463-22H4	0.20	0.20	0.00	0.81	0.00
intestine, neonate N07.CNhs11095.720-20F2	0.20	0.20	0.00	2.79	0.20
lung, neonate N00.CNhs11224.640-42C6	0.20	0.59	0.00	0.20	0.00
kidney, embryo E18.CNhs11001.1288-20C7	0.19	0.00	0.00	0.78	0.00
spleen, neonate N10.CNhs11116.752-24D1	0.19	4.52	0.00	0.38	1.32
testis, embryo E16.CNhs11033.470-26G5	0.19	0.19	0.19	0.19	0.00
liver, neonate N25.CNhs11198.1368-26H1	0.18	0.00	0.00	0.00	0.18
ovary, embryo E18.CNhs11040.505-44H7	0.18	0.00	0.00	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	0.17	0.17	0.00	0.00	0.17
lung, neonate N25.CNhs11119.1359-25C7	0.17	2.59	0.00	0.17	1.38
liver, neonate N00.CNhs11117.641-24F4	0.16	1.13	0.00	0.97	1.46
lung, neonate N06.CNhs11212.683-20E5	0.16	0.32	0.00	0.32	0.47
lung, neonate N20.CNhs11109.822-18A4	0.16	2.46	0.16	0.49	0.16
skin, neonate N10.CNhs11108.762-6C4	0.16	0.16	0.00	0.16	0.16
heart, embryo E16.CNhs11021.457-17C6	0.15	0.31	0.00	0.00	0.00
heart, neonate N20.CNhs11127.821-26I6	0.15	0.58	0.00	0.00	0.15
kidney, neonate N00.CNhs11214.646-21G7	0.14	0.07	0.00	2.60	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.14	7.88	0.14	5.11	8.29
testis, embryo E17.CNhs11029.486-18I5	0.13	0.13	0.00	0.13	0.13
testis, neonate N07.CNhs11222.726-26I4	0.13	0.13	0.00	0.13	0.00
heart, neonate N00.CNhs11213.639-21E3	0.12	0.23	0.00	0.00	0.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	0.11	1.37	0.11	0.69	0.91
stomach, embryo E16.CNhs11022.459-17D4	0.11	0.11	0.00	0.00	0.00
thymus, embryo E15.CNhs11005.430-45I2	0.10	1.54	0.00	0.00	0.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.09	0.00	0.09	1.17	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.08	0.33	0.00	0.17	0.00
skin, neonate N03.CNhs11215.662-22H3	0.06	0.36	0.00	0.00	0.18
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.45	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	2.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.34	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.23	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	19.24	0.00	0.26	2.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	6.76	0.00	1.69	1.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	2.81	0.00	2.11	1.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	2.40	0.00	0.00	0.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	1.44	0.00	0.24	0.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	16.78	0.00	0.34	2.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	18.97	0.00	0.09	2.45
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	2.43	0.00	0.00	1.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	1.40	0.00	0.00	2.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	18.30	0.00	0.16	8.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	18.37	0.00	0.41	7.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	18.25	0.00	0.00	10.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.00	1.12	0.00	1.12	0.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.46	0.00	0.92	0.46
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00	1.14	0.19
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.67	0.00	0.67	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.00	0.00	0.20	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	21.76	0.00	17.58	13.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	10.94	0.00	10.16	10.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	16.75	0.00	12.04	17.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	32.94	0.00	43.53	38.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	23.91	0.00	21.86	28.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	25.25	0.00	25.25	23.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	19.29	0.00	1.01	21.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	17.41	0.00	1.45	8.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	20.84	0.00	0.67	4.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.00	0.00	0.00	6.67	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.00	12.17	0.00	0.26	4.40
aorta, adult.CNhs10498.46-23H1	0.00	0.72	0.00	0.00	0.43
bone (os femoris), adult.CNhs10483.56-12G2	0.00	3.54	0.00	0.88	3.54
cecum, adult.CNhs10467.37-13H4	0.00	0.00	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.00	1.02	0.00	0.26	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	3.95	0.00	2.40	3.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	1.20	0.60	1.80	3.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	1.40	0.25	1.27	1.52
epididymis, adult.CNhs10490.58-23B2	0.00	0.51	0.00	0.76	0.25
forelimb, embryo E17.CNhs10598.1517-43C4	0.00	0.35	0.00	0.00	0.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	2.81	0.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.77	2.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	1.42	0.00	0.57	0.57
heart, embryo E15.CNhs11017.431-16C8	0.00	0.00	0.00	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.00	0.00	0.00	0.27	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.00	0.33	0.00	0.00	0.16
heart, neonate N10.CNhs11118.749-24G1	0.00	0.49	0.00	0.00	0.16
heart, neonate N16.CNhs11209.782-15G1	0.00	0.08	0.00	0.00	0.08
heart, neonate N25.CNhs11196.1351-25D3	0.00	0.66	0.00	0.00	0.44
heart, neonate N30.CNhs11202.1390-42D2	0.00	0.27	0.00	0.00	0.13
intestinal mucosa, adult.CNhs10506.860-29I3	0.00	1.32	0.00	0.33	0.00
intestine, adult.CNhs10496.178-9A3	0.00	0.26	0.00	0.26	0.26
intestine, embryo E15.CNhs10602.976-16D8	0.00	0.00	0.00	0.39	0.26
intestine, embryo E18.CNhs10526.1289-20F7	0.00	0.00	0.00	0.76	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.00	0.95	0.00	0.95	0.47
intestine, neonate N01.CNhs11192.1322-23E9	0.00	0.00	0.00	0.66	0.00
intestine, neonate N06.CNhs11102.688-20B8	0.00	0.50	0.00	2.26	0.50
intestine, neonate N10.CNhs11098.755-23A5	0.00	0.19	0.00	1.95	0.19
intestine, neonate N25.CNhs11121.1352-25E3	0.00	0.43	0.00	0.65	0.22
intestine, neonate N30.CNhs11131.1384-42G1	0.00	1.39	0.00	1.19	0.60
kidney, embryo E16.CNhs10584.464-22A5	0.00	0.00	0.00	0.00	0.00
kidney, embryo E17.CNhs11028.483-18I2	0.00	0.00	0.00	0.00	0.20
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.30	0.00	0.30	0.00
liver, embryo E13.CNhs10524.378-3H6	0.00	0.59	0.00	0.00	0.39
liver, embryo E14.CNhs10594.409-16E1	0.00	0.67	0.00	0.45	0.45
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.00	0.61	0.61
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00	0.24	0.48
liver, embryo E18.CNhs10579.499-43G4	0.00	1.44	0.29	0.58	1.15
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.00	0.00	0.27	0.27
liver, neonate N06.CNhs11101.684-20A8	0.00	1.44	0.00	0.00	1.44
liver, neonate N07.CNhs11103.716-20H2	0.00	2.60	0.00	0.37	1.86
liver, neonate N10.CNhs11115.751-24B9	0.00	1.56	0.00	0.00	0.62
liver, neonate N20.CNhs11220.823-25A3	0.00	1.77	0.00	0.25	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.00	0.00	0.00	0.96	0.48
lung, adult.CNhs10474.28-22B1	0.00	2.96	0.00	0.92	0.18
lung, embryo E18.CNhs10583.1287-20I6	0.00	0.00	0.00	0.48	0.95
lung, neonate N07.CNhs11111.715-19A3	0.00	0.00	0.22	0.66	0.22
lung, neonate N10.CNhs11219.750-23E6	0.00	1.59	0.00	0.48	0.64
lung, neonate N30.CNhs11133.1394-42H2	0.00	1.59	0.00	0.58	0.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	10.56	0.00	4.52	15.08
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.00	0.98	0.00	8.36	0.49
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.28	0.00	2.21	0.28
pancreas, adult.CNhs10486.34-16E4	0.00	1.33	0.00	1.33	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.00	0.00	0.00	0.30	0.00
pancreas, embryo E16.CNhs11003.460-26E5	0.00	0.00	0.00	0.75	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.00	0.00	0.00	2.07	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.00	1.23	0.00	1.54	0.31
pancreas, neonate N00.CNhs11105.645-26G9	0.00	0.26	0.00	1.29	0.52
pancreas, neonate N02.CNhs11139.1539-43D8	0.00	1.07	0.00	0.71	0.36
pancreas, neonate N16.CNhs11136.787-43B6	0.00	0.95	0.00	0.00	0.63
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	2.11	0.00	1.05	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	0.00	3.09	0.00	0.00	0.00
pituitary gland, adult.CNhs10493.21-1G8	0.00	0.00	0.00	0.00	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.00	0.23	0.23	4.22	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.21	0.00	7.63	0.00
skin, neonate N00.CNhs11124.650-25G4	0.00	0.48	0.00	0.00	0.00
small intestine, neonate N16.CNhs11114.790-21I1	0.00	1.17	0.00	0.58	0.00
spleen, embryo E16.CNhs11035.461-43C1	0.00	2.68	0.00	0.21	1.65
spleen, embryo E18.CNhs11011.1271-21F2	0.00	3.89	0.00	0.93	2.96
spleen, neonate N20.CNhs11112.824-19H1	0.00	6.97	0.00	0.14	1.91
spleen, neonate N25.CNhs11099.1354-25G3	0.00	8.01	0.00	0.46	3.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	10.54	0.00	7.82	13.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	8.82	0.00	6.72	12.32
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.00	0.00	1.97	0.22
stomach, neonate N25.CNhs11104.1355-25E4	0.00	0.26	0.26	0.26	0.00
stomach, neonate N30.CNhs11134.1386-42I1	0.00	0.26	0.00	4.93	0.26
submandibular gland, adult.CNhs10469.59-29C1	0.00	2.49	0.00	0.00	0.62
testis, embryo E13.CNhs11031.389-23F5	0.00	0.15	0.00	0.00	0.30
testis, embryo E15.CNhs11034.443-27C5	0.00	0.00	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.00	0.29	0.29	0.00	0.00
thymus, adult.CNhs10471.38-12B5	0.00	4.74	0.00	0.00	0.63
thymus, embryo E14.CNhs11041.402-44I4	0.00	1.82	0.00	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	0.00	2.47	0.13	0.13	0.26
thymus, embryo E17.CNhs10581.478-18C1	0.00	4.48	0.00	0.00	0.18
thymus, embryo E18.CNhs10595.1273-19G4	0.00	5.96	0.00	0.00	0.60
thymus, neonate N02.CNhs11181.1541-43F8	0.00	5.89	0.00	0.12	0.48
thymus, neonate N03.CNhs11137.2104-43C7	0.00	5.32	0.00	0.00	0.30
thymus, neonate N06.CNhs11197.681-26C4	0.00	6.06	0.00	0.10	0.61
thymus, neonate N07.CNhs11211.713-19D3	0.00	6.02	0.00	0.08	0.53
thymus, neonate N10.CNhs11194.748-24E4	0.00	7.36	0.00	0.00	0.40
thymus, neonate N20.CNhs11186.820-7A2	0.00	8.09	0.00	0.10	0.29
thymus, neonate N25.CNhs11125.1362-25G7	0.00	11.93	0.00	0.00	0.58
thymus, neonate N30.CNhs11132.1393-42G2	0.00	10.75	0.00	0.12	0.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	1.55	0.00
urinary bladder, adult.CNhs10481.879-12E4	0.00	1.35	0.00	3.28	0.00
vesicular gland, adult.CNhs10491.51-27F8	0.00	0.00	0.00	0.50	0.00

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p1@Fgd3
p2@Fgd3
p3@Fgd3
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p5@Fgd3

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	30938
LocusTag:	-
chromosome:	13
map location:	13 A5, 13 31.0 cM, 13 A5;;13 31.0 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Fgd3
Full name from nomenclature authority:	FYVE, RhoGEF and PH domain containing 3
Nomenclature status:	O
Other designations:	FYVE, RhoGEF and PH domain-containing protein 3, Fgd1 family, member 3, faciogenital dysplasia homolog 3, FYVE, RhoGEF and PH domain-containing protein 3;;Fgd1 family, member 3;;faciogenital dysplasia homolog 3
Modification date:	15.01.2012