EntrezGene:56839

Symbol:	Lgi1
Description:	leucine-rich repeat LGI family, member 1
Synonyms:	BB130740
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:56839 MGI:1861691 Ensembl:ENSMUSG00000067242 Vega:OTTMUSG00000016342
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr19:38339048..38339064,+	p5@Lgi1
Mm9::chr19:38339077..38339112,+	p3@Lgi1
Mm9::chr19:38339119..38339137,+	p4@Lgi1
Mm9::chr19:38339145..38339193,+	p2@Lgi1
Mm9::chr19:38339251..38339321,+	p1@Lgi1
Mm9::chr19:38339325..38339338,+	p7@Lgi1
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Lgi1	p2@Lgi1	p3@Lgi1	p4@Lgi1	p5@Lgi1

Sample	p1@Lgi1	p2@Lgi1	p3@Lgi1	p4@Lgi1	p5@Lgi1
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	65.08	47.27	8.22	10.28	7.54
cortex, adult.CNhs10473.12-14D5	62.40	60.66	16.17	16.17	7.30
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	61.19	41.55	6.80	9.82	9.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	60.08	46.58	8.78	11.48	4.73
cortex, neonate N30.CNhs11107.1392-42F2	58.30	31.71	8.18	11.51	4.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	51.10	41.89	9.21	11.51	5.06
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	49.99	51.34	7.21	8.11	9.01
hippocampus, adult.CNhs10478.13-16E8	49.84	40.38	23.97	16.61	14.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	45.31	58.46	7.25	6.80	4.53
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	44.68	37.64	7.91	5.67	4.64
cerebellum, neonate N30.CNhs11135.1395-42I2	43.36	18.43	4.19	2.51	1.47
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	41.25	30.94	12.60	9.74	8.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	37.80	42.46	7.77	5.70	7.25
corpus striatum, adult.CNhs10487.19-21D8	37.06	55.82	10.52	12.35	8.69
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	35.58	41.23	11.30	6.78	4.52
cerebellum, adult.CNhs10494.15-8B2	33.96	30.45	5.27	5.86	2.34
medulla oblongata, adult.CNhs10477.17-12C2	31.95	43.83	7.71	14.45	4.50
spinal cord, adult.CNhs10505.24-13C9	31.15	58.04	15.58	16.50	5.93
medulla oblongata, neonate N30.CNhs11200.1396-42A3	30.01	22.86	5.04	5.86	1.99
corpora quadrigemina, adult.CNhs10501.16-22A4	29.66	58.42	11.53	14.23	4.34
diencephalon, neonate N30.CNhs11201.1388-42B2	29.37	23.52	8.11	7.79	3.24
diencephalon, adult.CNhs10482.20-12F2	22.65	38.03	12.88	16.00	5.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	19.41	21.09	7.95	4.58	2.44
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	18.43	21.50	5.68	4.45	1.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	18.39	21.32	7.28	5.24	3.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	17.23	8.26	5.13	1.99	2.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	14.07	14.63	3.38	2.25	1.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	13.68	14.52	1.95	4.75	0.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	11.49	8.25	4.42	2.95	3.24
olfactory brain, adult.CNhs10489.18-22I9	9.96	17.99	18.96	9.96	11.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	8.84	6.55	1.70	1.62	1.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	7.71	8.81	8.81	2.20	1.10
corpus striatum, neonate N00.CNhs11226.630-43F1	7.29	4.15	0.88	1.26	1.01
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	7.08	0.75	1.12	0.75	0.37
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	6.41	3.31	2.21	1.77	1.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	5.73	1.56	0.00	2.08	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	5.45	3.91	4.01	0.72	2.37
Mouse Granule cells, donor1.CNhs12131.11713-123C3	4.86	0.81	0.20	0.20	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	4.76	0.53	1.06	1.06	0.00
ovary, neonate N00.CNhs11217.1299-22I4	3.91	1.14	0.81	0.33	0.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	3.77	1.32	0.94	0.75	0.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	3.75	1.56	1.19	0.73	0.55
whole body, neonate N01.CNhs10576.659-23C6	3.63	1.91	1.53	1.15	0.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	3.54	2.02	0.51	0.51	0.76
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	3.50	2.06	1.03	1.24	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	3.43	1.03	0.69	0.34	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	3.33	2.44	0.22	0.44	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	3.30	0.92	0.40	0.40	0.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	3.30	2.03	1.01	0.51	0.00
eyeball, embryo E12.CNhs11016.345-16C6	3.12	0.91	0.52	0.13	0.13
eyeball, embryo E15.CNhs10593.426-16C9	3.06	0.72	0.90	0.72	0.36
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	3.05	1.16	0.73	0.44	1.02
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	2.99	0.81	0.95	0.27	0.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	2.86	0.48	0.95	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	2.72	1.78	0.94	0.66	0.28
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	2.67	2.25	0.42	0.98	0.56
adrenal gland, neonate N00.CNhs11191.1311-23C1	2.59	1.06	0.35	0.35	0.59
eyeball, neonate N16.CNhs11188.777-19A2	2.59	4.66	0.52	1.81	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	2.57	4.28	1.14	1.43	0.29
eyeball, embryo E17.CNhs11023.1261-18D4	2.56	1.21	0.60	0.75	0.45
whole body, embryo E13.CNhs10512.372-23H2	2.56	0.34	0.34	0.51	0.68
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	2.54	1.41	0.38	0.66	0.47
eyeball, embryo E14.CNhs10521.399-16E2	2.53	0.23	0.46	0.46	0.46
eyeball, neonate N00.CNhs11207.633-15C6	2.45	1.09	0.61	0.41	0.27
adrenal gland, embryo E16.CNhs11004.1254-43D6	2.44	0.00	0.30	0.00	0.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	2.39	0.00	0.00	0.14	0.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	2.38	2.20	0.37	0.73	0.18
whole body, neonate N00.CNhs10525.657-19C2	2.36	1.07	0.43	0.86	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	2.31	2.14	0.33	0.33	0.16
whole body, embryo E14.CNhs10519.395-14B1	2.31	1.26	0.21	0.21	0.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	2.31	0.58	0.77	0.39	0.39
adrenal gland, embryo E14.CNhs11038.406-44C5	2.26	0.87	0.35	0.17	0.35
kidney, embryo E16.CNhs10584.464-22A5	2.25	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	2.25	1.93	0.32	1.28	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	2.25	0.59	0.24	0.47	0.12
whole body, neonate N06.CNhs10515.692-21D1	2.21	2.65	0.44	0.88	0.88
whole body, embryo E14.5.CNhs10578.420-27D2	2.19	1.70	0.97	0.97	0.24
whole body, embryo E17.5.CNhs10513.490-9F9	2.12	1.54	0.58	1.35	0.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	2.09	1.27	0.58	0.23	0.35
whole body, neonate N10.CNhs10518.761-6B4	2.09	2.78	0.46	0.46	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	2.05	0.96	0.58	0.38	0.58
pituitary gland, adult.CNhs10493.21-1G8	2.04	3.06	0.00	0.34	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	2.01	1.38	0.63	0.80	0.23
whole body, embryo E17.CNhs10517.475-3I5	2.00	2.50	0.00	2.00	0.50
forelimb, embryo E14.CNhs10577.413-26A8	1.97	0.66	0.22	0.22	0.00
ovary, embryo E18.CNhs11040.505-44H7	1.96	1.07	0.53	0.00	0.36
Mouse Granule cells, donor3.CNhs12108.11636-122C7	1.90	0.63	0.63	0.00	1.27
whole body, embryo E18.CNhs10516.493-3B3	1.87	1.64	0.70	0.94	0.70
adrenal gland, embryo E17.CNhs11043.1263-45I1	1.84	0.00	0.46	0.00	0.23
eyeball, neonate N01.CNhs11140.1532-43E7	1.79	1.15	0.26	0.13	0.13
eyeball, neonate N02.CNhs11205.1551-44G8	1.78	0.37	0.56	0.47	0.47
forelimb, embryo E17.CNhs10598.1517-43C4	1.74	1.39	0.35	0.00	0.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	1.68	0.56	0.00	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	1.66	0.45	1.21	0.30	0.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	1.65	2.06	1.24	0.41	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	1.64	1.64	0.00	0.00	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	1.63	0.41	0.31	0.10	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	1.62	1.32	0.59	0.74	0.29
vesicular gland, adult.CNhs10491.51-27F8	1.50	5.52	0.50	0.50	0.00
eyeball, adult.CNhs10484.31-12G4	1.47	1.47	0.42	0.42	0.84
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	1.44	1.35	0.42	0.68	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	1.43	2.62	0.72	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	1.39	2.01	0.62	0.00	0.31
tongue, adult.CNhs10499.32-1B4	1.36	2.27	0.45	0.45	0.45
testis, embryo E13.CNhs11031.389-23F5	1.35	0.30	0.30	0.45	0.30
adrenal gland, adult.CNhs10508.49-24D7	1.34	0.74	0.00	0.45	0.45
whole body, embryo E16.CNhs10514.453-14F2	1.29	0.55	0.00	0.37	0.18
kidney, embryo E15.CNhs10997.434-16F8	1.26	0.34	0.46	0.23	0.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	1.26	0.25	0.25	0.25	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	1.24	0.18	0.18	0.00	0.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	1.22	0.37	0.49	0.24	0.12
kidney, embryo E17.CNhs11028.483-18I2	1.22	0.41	0.20	0.20	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	1.22	0.61	0.00	0.00	0.00
kidney, embryo E18.CNhs11001.1288-20C7	1.16	0.00	0.39	0.00	0.78
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	1.14	0.80	0.11	0.11	0.23
bone (os femoris), neonate N02.CNhs11227.1985-43F5	1.13	0.49	0.32	0.32	0.00
spleen, embryo E18.CNhs11011.1271-21F2	1.11	0.19	0.56	0.19	0.56
pituitary gland, embryo E14.CNhs11037.398-44A5	1.07	0.21	0.21	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	1.06	1.95	1.06	0.71	0.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	1.05	0.79	0.26	0.53	0.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	1.04	0.62	0.21	0.10	0.21
heart, neonate N20.CNhs11127.821-26I6	1.02	0.29	0.15	0.00	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.99	0.41	1.16	0.00	0.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	0.99	0.79	0.39	0.00	0.59
Mouse Schwann, donor2.CNhs12573.11746-123F9	0.98	0.08	0.15	0.08	0.00
kidney, neonate N00.CNhs11214.646-21G7	0.98	0.42	0.35	0.21	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.98	0.98	0.49	0.00	0.49
intestine, neonate N10.CNhs11098.755-23A5	0.97	0.58	0.39	0.19	0.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	0.96	0.48	0.29	0.19	0.19
stomach, adult.CNhs10503.33-1H6	0.95	0.95	0.95	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	0.93	0.70	0.23	0.00	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	0.92	0.92	0.92	0.00	0.00
prostate, adult.CNhs10470.859-1F8	0.88	1.32	0.00	0.44	0.44
stomach, embryo E17.CNhs11006.1035-18D5	0.84	0.42	0.63	0.00	0.42
spleen, embryo E16.CNhs11035.461-43C1	0.83	0.62	0.83	0.21	0.62
heart, neonate N30.CNhs11202.1390-42D2	0.81	1.07	0.00	0.00	0.27
whole body, embryo E12.CNhs10587.857-27C9	0.80	0.80	0.00	0.40	0.00
intestine, embryo E15.CNhs10602.976-16D8	0.77	0.26	0.26	0.13	0.00
urinary bladder, adult.CNhs10481.879-12E4	0.77	0.97	0.19	0.19	0.77
stomach, embryo E16.CNhs11022.459-17D4	0.76	0.32	0.11	0.11	0.32
pancreas, neonate N01.CNhs11138.1531-43D7	0.73	0.00	0.00	0.00	0.00
aorta, adult.CNhs10498.46-23H1	0.72	0.29	0.00	0.14	0.29
pancreas, neonate N02.CNhs11139.1539-43D8	0.71	0.36	0.00	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.70	0.23	0.23	0.23	0.00
heart, neonate N25.CNhs11196.1351-25D3	0.66	0.66	0.44	0.22	0.22
testis, embryo E15.CNhs11034.443-27C5	0.66	0.17	0.00	0.00	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	0.62	0.62	0.82	0.00	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	0.61	0.08	0.23	0.00	0.08
pancreas, embryo E18.CNhs10580.1535-43I7	0.61	0.00	0.00	0.00	0.31
lung, embryo E12.CNhs10522.354-16G2	0.57	0.19	0.19	0.00	0.00
testis, embryo E17.CNhs11029.486-18I5	0.52	0.13	0.00	0.00	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.51	0.06	0.06	0.13	0.06
thymus, embryo E15.CNhs11005.430-45I2	0.51	0.00	0.10	0.10	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	0.49	0.66	0.16	0.16	0.00
skin, adult.CNhs10492.30-1C3	0.49	0.49	0.33	0.00	0.00
skin, neonate N00.CNhs11124.650-25G4	0.48	0.00	0.16	0.00	0.32
intestine, embryo E12.CNhs11019.1251-16I5	0.43	0.00	0.21	0.00	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	0.41	0.81	0.14	0.27	0.00
stomach, embryo E15.CNhs10603.1252-16G8	0.41	0.20	0.41	0.00	0.20
thymus, embryo E14.CNhs11041.402-44I4	0.41	0.61	0.00	0.41	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	0.40	0.40	0.40	0.00	0.40
stomach, neonate N03.CNhs11193.1340-24B8	0.40	0.40	0.13	0.00	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	0.38	0.38	0.13	0.25	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	0.36	0.36	0.00	0.00	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	0.36	0.36	0.00	0.36	0.00
thymus, embryo E17.CNhs10581.478-18C1	0.36	0.00	0.00	0.18	0.00
forelimb, embryo E13.CNhs10589.384-1E2	0.35	0.35	0.18	0.18	0.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.34	0.00	0.00	0.00	0.00
lung, embryo E15.CNhs11020.432-17C5	0.34	0.00	0.17	0.00	0.00
testis, embryo E18.CNhs11027.503-18G5	0.34	0.00	0.17	0.00	0.34
heart, neonate N10.CNhs11118.749-24G1	0.33	0.00	0.00	0.00	0.16
lung, embryo E14.CNhs10604.404-26F8	0.33	0.33	0.00	0.00	0.00
heart, neonate N16.CNhs11209.782-15G1	0.32	0.16	0.08	0.08	0.00
pancreas, neonate N16.CNhs11136.787-43B6	0.32	0.00	0.00	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	0.31	0.00	0.00	0.00	0.00
liver, neonate N10.CNhs11115.751-24B9	0.31	0.00	0.00	0.00	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.30	0.00	0.30	0.59	0.30
thymus, neonate N10.CNhs11194.748-24E4	0.30	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	0.29	0.00	0.58	0.29	0.58
ovary, adult.CNhs10507.91-2I7	0.28	0.28	0.00	0.00	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.27	0.00	0.00	0.00	0.00
stomach, neonate N25.CNhs11104.1355-25E4	0.26	0.52	0.00	0.00	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	0.25	0.37	0.12	0.25	0.25
heart, embryo E14.CNhs10597.403-26D4	0.24	0.00	0.00	0.00	0.00
pancreas, embryo E14.CNhs11012.405-44F4	0.24	0.00	0.24	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	0.23	0.00	0.00	0.00	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.23	0.00	0.00	0.00	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	0.22	0.00	0.00	0.22	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	0.22	0.44	0.22	0.44	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.22	0.22	0.22	0.00	0.00
lung, neonate N07.CNhs11111.715-19A3	0.22	0.00	0.00	0.00	0.00
vagina, adult.CNhs10502.89-27D5	0.21	0.21	0.21	0.21	0.21
gonad, embryo E13.CNhs11044.1564-45I6	0.20	0.00	0.00	0.00	0.00
intestine, embryo E16.CNhs10585.463-22H4	0.20	0.00	0.20	0.00	0.20
intestine, neonate N07.CNhs11095.720-20F2	0.20	0.60	0.40	0.00	0.20
thymus, neonate N06.CNhs11197.681-26C4	0.20	0.10	0.00	0.00	0.10
forelimb, embryo E12.CNhs10600.359-14H2	0.19	0.00	0.19	0.19	0.19
intestine, embryo E18.CNhs10526.1289-20F7	0.19	0.19	0.19	0.00	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.19	0.19	0.38	0.00	0.76
pancreas, embryo E16.CNhs11003.460-26E5	0.19	0.00	0.19	0.00	0.19
spleen, neonate N10.CNhs11116.752-24D1	0.19	0.00	0.19	0.00	0.19
testis, embryo E16.CNhs11033.470-26G5	0.19	0.39	0.00	0.19	0.58
uterus, adult.CNhs10509.92-27E5	0.18	0.37	0.00	0.00	0.00
lung, embryo E17.CNhs10605.480-44A6	0.17	0.00	0.00	0.17	0.00
spleen, adult.CNhs10465.25-2G2	0.17	0.00	0.34	0.00	0.00
intestine, neonate N01.CNhs11192.1322-23E9	0.16	0.16	0.00	0.16	0.00
lung, neonate N06.CNhs11212.683-20E5	0.16	0.00	0.00	0.00	0.16
lung, neonate N20.CNhs11109.822-18A4	0.16	0.16	0.00	0.00	0.00
skin, neonate N10.CNhs11108.762-6C4	0.16	0.00	0.00	0.00	0.16
stomach, embryo E12.CNhs10588.356-43E3	0.16	0.00	0.00	0.00	0.00
thymus, neonate N03.CNhs11137.2104-43C7	0.15	0.00	0.00	0.00	0.00
thymus, neonate N07.CNhs11211.713-19D3	0.15	0.00	0.00	0.08	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	0.13	0.39	0.00	0.00	0.13
stomach, neonate N30.CNhs11134.1386-42I1	0.13	0.13	0.13	0.52	0.00
testis, neonate N07.CNhs11222.726-26I4	0.13	0.00	0.00	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	0.12	0.12	0.00	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	0.12	0.00	0.12	0.00	0.06
skin, neonate N06.CNhs11097.693-20I5	0.12	0.24	0.24	0.24	0.00
thymus, neonate N20.CNhs11186.820-7A2	0.10	0.00	0.00	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.00	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.00	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	0.00	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	0.00	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	0.00	0.00	0.00	0.00	0.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	0.00	0.00	0.14	0.00	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	0.00	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	0.00	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.00	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	0.00	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	0.00	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	0.00	0.00	0.00	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	0.00	0.00	0.00	0.00	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	0.00	0.42	0.21	0.21	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.00	0.00	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	0.00	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	0.00	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	0.00	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	0.00	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	0.00	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.00	0.00	0.00	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.00	0.00	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	0.00	2.65	0.88	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.00	0.48	0.00	0.48	0.48
cecum, adult.CNhs10467.37-13H4	0.00	1.86	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.00	0.51	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00	0.00	0.00
epididymis, adult.CNhs10490.58-23B2	0.00	0.00	0.00	0.00	0.00
forelimb, embryo E11.CNhs10596.335-25E2	0.00	0.00	0.00	0.22	0.00
forelimb, embryo E15.CNhs11007.437-20E7	0.00	0.00	0.28	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	0.00	0.00	0.00	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	0.00	0.18	0.00	0.00	0.00
heart, embryo E15.CNhs11017.431-16C8	0.00	0.00	0.00	0.00	0.00
heart, embryo E16.CNhs11021.457-17C6	0.00	0.00	0.00	0.00	0.00
heart, embryo E17.CNhs11025.479-18E5	0.00	0.00	0.00	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.00	0.00	0.00	0.27	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.00	0.00	0.00	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.00	0.00	0.00	0.00	0.00
intestine, adult.CNhs10496.178-9A3	0.00	0.00	0.00	0.26	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.00	0.00	0.00	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	0.00	0.50	0.00	0.50	0.50
intestine, neonate N20.CNhs11187.827-18D1	0.00	0.00	0.90	0.00	0.00
intestine, neonate N25.CNhs11121.1352-25E3	0.00	0.00	0.00	0.00	0.00
intestine, neonate N30.CNhs11131.1384-42G1	0.00	0.00	0.00	0.00	0.00
kidney, neonate N20.CNhs11113.832-19I1	0.00	0.00	0.15	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.00	0.00	0.00	0.00	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.00	0.00	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	0.00	0.00	0.00	0.00	0.00
liver, embryo E13.CNhs10524.378-3H6	0.00	0.00	0.00	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	0.00	0.00	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.20	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00	0.24	0.00
liver, embryo E17.CNhs10510.481-18A3	0.00	0.00	0.00	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	0.00	0.00	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	0.00	0.00	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.00	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	0.00	0.00	0.00	0.00	0.00
liver, neonate N07.CNhs11103.716-20H2	0.00	0.00	0.00	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	0.00	0.00	0.00	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	0.00	0.36	0.00	0.00	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.00	0.00	0.00	0.00	0.00
lung, adult.CNhs10474.28-22B1	0.00	0.00	0.00	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	0.00	0.00	0.00	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	0.00	0.00	0.00	0.00	0.24
lung, neonate N00.CNhs11224.640-42C6	0.00	0.00	0.00	0.00	0.20
lung, neonate N10.CNhs11219.750-23E6	0.00	0.00	0.00	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	0.00	0.17	0.00	0.17	0.00
lung, neonate N30.CNhs11133.1394-42H2	0.00	0.00	0.14	0.14	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.54	0.00	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.00	0.28	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.00	0.00	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.00	0.00	0.00	0.00	0.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	0.00	0.00	0.39	0.00	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	0.00	0.22	0.43	0.22	0.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.00	0.00	0.48	0.24	0.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.00	0.45	0.22	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.00	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	0.00	0.40	0.40	0.40	0.00
pancreas, adult.CNhs10486.34-16E4	0.00	1.33	0.00	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.00	0.30	0.00	0.00	0.30
pancreas, neonate N00.CNhs11105.645-26G9	0.00	0.26	0.00	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	0.00	0.00	0.00	0.00	1.03
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.00	0.00	0.00	0.00
small intestine, neonate N16.CNhs11114.790-21I1	0.00	0.29	0.00	0.29	0.00
spleen, neonate N25.CNhs11099.1354-25G3	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.00	0.00	0.00	0.00	0.00
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.00	0.44	0.22	0.22
submandibular gland, adult.CNhs10469.59-29C1	0.00	0.00	0.00	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.00	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	0.00	0.00	0.00	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.00	0.00	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.00	0.00	0.00	0.00	0.00
thymus, adult.CNhs10471.38-12B5	0.00	0.00	0.00	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	0.00	0.00	0.00	0.13	0.13
thymus, embryo E18.CNhs10595.1273-19G4	0.00	0.20	0.00	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	0.00	0.12	0.00	0.00	0.00
thymus, neonate N25.CNhs11125.1362-25G7	0.00	0.00	0.00	0.00	0.00
thymus, neonate N30.CNhs11132.1393-42G2	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.00	0.00	0.00	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	0.00	0.00	0.00	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	0.00	0.00	0.21	0.10	0.00

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p1@Lgi1
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p5@Lgi1

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	56839
LocusTag:	-
chromosome:	19
map location:	19 C3, 19, 19 C3;;19
type of gene:	protein-coding
Symbol from nomenclature authority:	Lgi1
Full name from nomenclature authority:	leucine-rich repeat LGI family, member 1
Nomenclature status:	O
Other designations:	leucine-rich glioma-inactivated protein 1, leucine-rich, glioma inactivated 1, leucine-rich glioma-inactivated protein 1;;leucine-rich, glioma inactivated 1
Modification date:	30.12.2011