EntrezGene:68094

Symbol:	Smarcc2
Description:	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Synonyms:	5930405J04Rik
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:68094 MGI:1915344 Ensembl:ENSMUSG00000025369
Associated motifs:	NA
Transcripton Factor?:	Yes

TSS regions

---

Copy Excel CSV PDF

Show 102550All entries

Search:

Mm9::chr10:127896024..127896045,+	p3@Smarcc2
Mm9::chr10:127896265..127896276,+	p4@Smarcc2
Mm9::chr10:127896295..127896304,+	p6@Smarcc2
Mm9::chr10:127896315..127896333,+	p2@Smarcc2
Mm9::chr10:127896346..127896384,+	p1@Smarcc2
Mm9::chr10:127911622..127911633,+	p7@Smarcc2
Mm9::chr10:127926139..127926176,+	p8@Smarcc2
TSS peak ID	Short_description

Showing 1 to 7 of 7 entries

Previous1Next

View on UCSC genome browser

---

Mouse over to see Genome browser image, Click image to go to Genome browser

TSS expression

---

Copy Excel CSV PDF

Search:

Sample	p1@Smarcc2	p2@Smarcc2	p3@Smarcc2	p4@Smarcc2

Sample	p1@Smarcc2	p2@Smarcc2	p3@Smarcc2	p4@Smarcc2
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	112.53	15.00	3.39	5.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	97.95	15.62	2.20	6.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	96.15	9.63	4.35	3.56
accessory axillary lymph node, adult.CNhs10475.1063-29H9	92.18	1.81	1.81	0.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	89.60	5.21	2.08	3.13
cerebellum, neonate N30.CNhs11135.1395-42I2	87.13	5.24	1.68	2.30
Mouse Granule cells, donor2.CNhs12357.11731-123E3	86.23	8.46	2.12	1.59
cerebellum, adult.CNhs10494.15-8B2	79.93	4.10	4.10	0.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	79.56	3.85	0.00	1.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	76.68	9.06	3.18	3.92
Mouse Granule cells, donor1.CNhs12131.11713-123C3	76.27	10.93	4.65	3.03
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	75.68	8.39	2.61	3.73
corpus striatum, neonate N00.CNhs11226.630-43F1	73.76	4.52	4.90	3.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	73.72	13.06	2.49	5.60
hippocampus, neonate N00.CNhs11228.627-43G1	72.44	6.07	2.98	3.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	69.41	7.78	2.73	3.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	66.18	8.27	0.92	2.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	65.75	9.86	1.62	4.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	63.40	2.90	0.34	1.02
aorta, adult.CNhs10498.46-23H1	61.45	1.59	2.75	0.29
lung, neonate N10.CNhs11219.750-23E6	59.95	1.59	0.64	0.48
olfactory brain, adult.CNhs10489.18-22I9	59.12	3.21	4.50	2.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	58.61	0.00	2.55	2.55
pancreas, neonate N02.CNhs11139.1539-43D8	56.33	2.50	1.43	0.36
hippocampus, adult.CNhs10478.13-16E8	56.15	3.36	2.73	1.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	54.67	5.27	2.28	1.28
spinal cord, adult.CNhs10505.24-13C9	54.14	4.08	2.97	2.78
lung, adult.CNhs10474.28-22B1	54.13	1.66	0.55	0.37
lung, neonate N30.CNhs11133.1394-42H2	53.95	1.45	1.88	1.01
Mouse Granule cells, donor3.CNhs12108.11636-122C7	53.88	13.31	3.80	2.54
lung, neonate N25.CNhs11119.1359-25C7	53.88	2.59	0.69	0.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	53.63	2.64	0.51	0.91
whole body, embryo E12.CNhs10587.857-27C9	53.47	2.79	3.59	0.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	53.00	2.77	1.01	0.38
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	51.96	3.95	3.39	1.69
lung, neonate N20.CNhs11109.822-18A4	51.78	1.97	0.98	0.66
diencephalon, neonate N30.CNhs11201.1388-42B2	51.59	3.41	2.76	2.27
lung, neonate N07.CNhs11111.715-19A3	51.38	1.55	1.55	1.11
oviduct, adult pregnant day01.CNhs10500.988-6G6	51.14	0.99	2.97	0.49
corpora quadrigemina, adult.CNhs10501.16-22A4	50.78	4.04	2.40	3.89
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	50.69	9.70	1.79	3.70
cortex, adult.CNhs10473.12-14D5	50.58	4.52	3.82	3.13
pancreas, neonate N30.CNhs11182.1548-44H5	50.54	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	50.32	0.00	1.44	0.00
vesicular gland, adult.CNhs10491.51-27F8	50.16	0.50	1.00	0.50
intestine, neonate N10.CNhs11098.755-23A5	49.91	1.17	1.95	0.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	49.76	0.00	0.00	0.00
prostate, adult.CNhs10470.859-1F8	49.40	1.10	0.22	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	49.39	1.93	1.66	0.55
pancreas, neonate N16.CNhs11136.787-43B6	49.30	0.63	0.63	0.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	49.19	3.85	1.65	1.47
spleen, neonate N20.CNhs11112.824-19H1	48.80	1.50	1.23	1.09
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	48.74	7.95	2.75	3.21
eyeball, neonate N16.CNhs11188.777-19A2	48.38	0.78	3.62	1.03
pancreas, neonate N01.CNhs11138.1531-43D7	48.35	2.54	0.36	0.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	48.07	2.81	1.15	0.92
heart, neonate N03.CNhs11221.1349-25I2	47.56	1.65	0.66	0.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	47.54	0.29	3.48	0.58
medulla oblongata, neonate N30.CNhs11200.1396-42A3	47.24	4.22	1.64	2.70
submandibular gland, adult.CNhs10469.59-29C1	47.22	0.62	0.62	0.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	47.02	1.56	1.04	0.52
testis, neonate N07.CNhs11222.726-26I4	47.00	2.08	2.47	0.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	46.70	2.78	1.27	1.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	46.68	3.28	1.16	0.77
heart, neonate N16.CNhs11209.782-15G1	46.53	0.81	1.70	1.05
skin, neonate N00.CNhs11124.650-25G4	46.50	1.13	0.97	0.32
eyeball, neonate N00.CNhs11207.633-15C6	46.40	3.13	2.18	2.18
stomach, neonate N07.CNhs11210.718-18A9	46.20	0.91	0.83	0.25
lung, neonate N06.CNhs11212.683-20E5	46.19	2.68	1.89	1.26
cortex, neonate N30.CNhs11107.1392-42F2	46.03	2.05	4.86	4.09
lung, neonate N00.CNhs11224.640-42C6	45.86	0.98	0.98	0.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	45.62	7.37	1.84	4.61
eyeball, neonate N01.CNhs11140.1532-43E7	45.61	3.59	2.18	1.41
kidney, neonate N20.CNhs11113.832-19I1	45.61	0.89	1.62	0.89
skin, neonate N03.CNhs11215.662-22H3	45.60	1.39	2.05	0.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	45.42	1.23	3.27	1.23
diencephalon, adult.CNhs10482.20-12F2	45.09	3.53	2.70	1.87
ovary, adult.CNhs10507.91-2I7	44.85	1.56	1.56	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	44.75	2.11	1.02	1.22
whole body, embryo E17.CNhs10517.475-3I5	44.72	3.75	2.50	0.25
skin, adult.CNhs10492.30-1C3	44.68	1.48	2.47	0.99
medulla oblongata, adult.CNhs10477.17-12C2	44.63	5.30	2.09	1.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	43.81	4.95	0.35	0.00
kidney, neonate N10.CNhs11206.758-6D5	43.76	1.77	2.15	0.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	43.67	3.42	1.32	0.79
heart, neonate N00.CNhs11213.639-21E3	43.44	1.05	1.05	1.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	43.27	4.14	2.30	0.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	43.27	2.06	2.47	3.30
heart, neonate N10.CNhs11118.749-24G1	43.01	1.15	1.31	1.15
adrenal gland, neonate N25.CNhs11223.1377-27I3	42.85	2.14	0.75	0.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	42.80	0.73	2.90	0.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	42.72	1.46	0.00	0.00
intestine, neonate N25.CNhs11121.1352-25E3	42.58	0.86	0.65	0.43
pancreas, embryo E17.CNhs10599.1558-45G3	42.52	1.77	1.77	0.59
heart, embryo E17.CNhs11025.479-18E5	42.32	3.02	0.47	0.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	42.28	2.75	3.44	1.89
forelimb, embryo E15.CNhs11007.437-20E7	42.26	3.06	2.78	0.28
thymus, neonate N30.CNhs11132.1393-42G2	42.19	2.45	1.17	1.99
bone (os femoris), neonate N20.CNhs11195.1350-25C3	42.18	0.97	0.97	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	42.17	1.05	1.05	0.00
eyeball, adult.CNhs10484.31-12G4	42.09	1.26	2.74	0.00
adrenal gland, adult.CNhs10508.49-24D7	42.01	0.59	0.89	0.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	41.91	0.48	2.38	0.48
bone (os femoris), neonate N02.CNhs11227.1985-43F5	41.90	0.97	0.81	0.81
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	41.66	0.25	0.50	0.25
lung, embryo E17.CNhs10605.480-44A6	41.54	2.18	1.68	0.67
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	41.52	3.72	1.39	1.08
thymus, neonate N20.CNhs11186.820-7A2	41.42	1.56	2.14	2.34
pituitary gland, embryo E14.CNhs11037.398-44A5	41.37	2.14	2.36	2.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	41.36	1.57	1.57	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	41.29	3.64	0.40	1.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	41.26	0.68	0.51	0.34
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	41.18	3.38	0.68	2.70
pancreas, neonate N00.CNhs11105.645-26G9	41.09	1.55	1.29	0.26
intestine, neonate N30.CNhs11131.1384-42G1	40.82	0.80	1.00	0.60
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	40.78	1.97	1.38	0.99
stomach, neonate N03.CNhs11193.1340-24B8	40.73	1.08	1.21	0.67
intestine, embryo E13.CNhs11010.381-16D5	40.64	2.09	0.93	0.70
whole body, neonate N00.CNhs10525.657-19C2	40.61	1.50	1.29	0.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	40.59	1.18	1.18	1.18
stomach, neonate N30.CNhs11134.1386-42I1	40.57	0.91	0.39	0.13
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	40.56	0.70	0.87	0.70
heart, neonate N30.CNhs11202.1390-42D2	40.53	1.34	0.94	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	40.45	1.78	1.66	0.47
spleen, neonate N10.CNhs11116.752-24D1	40.31	1.88	1.13	1.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	40.07	6.78	2.06	1.47
intestine, neonate N07.CNhs11095.720-20F2	39.99	0.60	2.79	0.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	39.96	2.81	1.69	1.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	39.89	0.42	1.70	0.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	39.87	1.04	3.11	4.66
colon, adult.CNhs10468.36-18H7	39.85	0.77	1.28	0.51
bone (os femoris), neonate N16.CNhs11225.1525-43A6	39.75	2.65	1.33	0.66
uterus, adult.CNhs10509.92-27E5	39.74	1.47	2.01	0.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	39.71	4.57	2.29	1.71
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	39.71	1.09	2.18	0.00
small intestine, neonate N16.CNhs11114.790-21I1	39.64	0.29	0.87	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	39.10	1.65	2.68	0.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	39.06	1.41	1.22	0.66
pituitary gland, embryo E15.CNhs10592.427-16B9	39.01	1.42	1.95	0.71
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	38.93	1.34	2.85	1.34
heart, neonate N20.CNhs11127.821-26I6	38.89	1.46	1.90	0.73
testis, embryo E16.CNhs11033.470-26G5	38.89	1.36	2.33	0.78
thymus, neonate N06.CNhs11197.681-26C4	38.87	1.62	0.91	2.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	38.87	1.19	0.48	0.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	38.75	1.95	1.69	0.76
eyeball, neonate N02.CNhs11205.1551-44G8	38.70	4.12	1.78	2.16
pituitary gland, embryo E13.CNhs11009.370-44C7	38.68	3.62	4.27	0.52
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	38.65	3.75	1.99	0.66
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	38.57	2.17	0.68	0.68
pituitary gland, embryo E16.CNhs11036.449-43F6	37.99	1.96	2.14	0.71
thymus, neonate N03.CNhs11137.2104-43C7	37.81	2.07	2.07	1.92
ovary, neonate N00.CNhs11217.1299-22I4	37.79	1.14	1.79	0.98
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	37.65	0.76	2.27	0.00
spleen, embryo E16.CNhs11035.461-43C1	37.36	2.48	2.06	0.62
lung, embryo E16.CNhs10998.458-17B6	37.32	2.11	1.41	1.17
adrenal gland, neonate N00.CNhs11191.1311-23C1	37.16	0.71	1.06	0.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	37.08	2.34	1.59	0.94
eyeball, embryo E17.CNhs11023.1261-18D4	37.07	2.86	1.96	1.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	36.95	1.24	1.12	0.37
ovary, embryo E18.CNhs11040.505-44H7	36.86	2.49	1.96	0.89
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	36.85	8.93	1.40	5.03
intestine, neonate N20.CNhs11187.827-18D1	36.85	1.80	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	36.79	0.94	0.19	0.19
heart, embryo E14.CNhs10597.403-26D4	36.70	2.84	0.95	1.18
thymus, neonate N10.CNhs11194.748-24E4	36.70	2.62	1.11	1.81
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	36.59	3.96	0.99	0.00
kidney, neonate N00.CNhs11214.646-21G7	36.54	2.10	1.75	1.05
skin, neonate N06.CNhs11097.693-20I5	36.53	0.48	2.03	1.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	36.37	0.79	0.79	0.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	36.34	1.45	1.60	0.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	36.31	3.43	2.74	2.06
whole body, embryo E14.5.CNhs10578.420-27D2	36.22	1.94	0.97	0.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	36.21	2.13	0.53	0.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	36.19	3.02	1.51	0.86
urinary bladder, adult.CNhs10481.879-12E4	36.13	0.19	1.74	0.97
pituitary gland, adult.CNhs10493.21-1G8	36.09	1.70	1.70	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	36.04	0.91	1.83	1.65
pituitary gland, embryo E17.CNhs11039.1265-44F5	35.87	1.81	2.14	0.66
pancreas, adult.CNhs10486.34-16E4	35.84	1.33	1.33	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	35.80	6.80	3.63	4.98
testis, neonate N00.CNhs11189.1300-22B7	35.68	1.41	1.64	0.70
stomach, embryo E15.CNhs10603.1252-16G8	35.58	1.63	1.63	1.22
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	35.55	2.38	3.15	1.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	35.44	1.63	2.04	0.71
intestine, neonate N06.CNhs11102.688-20B8	35.44	1.76	2.51	0.25
Mouse Schwann, donor2.CNhs12573.11746-123F9	35.22	3.55	0.68	0.91
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	35.17	0.95	0.63	1.74
intestinal mucosa, adult.CNhs10506.860-29I3	35.02	1.65	0.66	0.66
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	34.95	3.44	1.72	1.72
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	34.90	2.07	2.07	0.19
heart, embryo E18.CNhs11030.1283-20G3	34.88	2.68	0.54	0.54
kidney, neonate N25.CNhs11122.1353-25F3	34.85	0.94	2.04	0.63
thymus, neonate N25.CNhs11125.1362-25G7	34.83	2.31	1.35	2.69
forelimb, embryo E12.CNhs10600.359-14H2	34.80	4.16	2.46	1.32
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	34.75	3.78	1.51	4.53
whole body, embryo E17.5.CNhs10513.490-9F9	34.72	1.93	1.54	1.74
liver, neonate N20.CNhs11220.823-25A3	34.60	0.00	1.77	0.51
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	34.44	2.50	2.06	0.88
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	34.43	1.56	3.91	0.00
pancreas, embryo E16.CNhs11003.460-26E5	34.33	2.07	0.57	0.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	34.23	0.44	1.33	0.22
testis, neonate N10.CNhs11204.763-44D9	34.18	1.05	5.14	1.36
forelimb, embryo E17.CNhs10598.1517-43C4	34.13	1.39	1.04	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	34.03	2.52	1.98	0.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	33.90	2.09	0.84	0.42
corpus striatum, adult.CNhs10487.19-21D8	33.86	4.58	2.75	0.92
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	33.81	0.81	0.61	0.20
forelimb, embryo E13.CNhs10589.384-1E2	33.61	2.82	2.82	1.58
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	33.56	2.50	0.50	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	33.47	0.68	1.37	2.05
lung, embryo E15.CNhs11020.432-17C5	33.44	1.70	0.17	0.85
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	33.40	3.68	0.85	1.42
heart, neonate N25.CNhs11196.1351-25D3	33.37	0.22	1.76	0.88
heart, embryo E15.CNhs11017.431-16C8	33.25	0.98	1.97	1.38
intestine, neonate N00.CNhs11126.644-26D1	33.22	0.00	1.42	0.47
thymus, neonate N02.CNhs11181.1541-43F8	33.17	1.32	1.56	2.88
epididymis, adult.CNhs10490.58-23B2	32.85	0.76	1.26	0.25
spleen, adult.CNhs10465.25-2G2	32.81	2.05	1.54	0.51
bone (os femoris), adult.CNhs10483.56-12G2	32.73	1.77	1.77	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	32.67	0.52	1.68	1.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	32.66	3.11	1.56	0.39
skin, neonate N10.CNhs11108.762-6C4	32.66	1.15	2.30	1.48
lung, embryo E14.CNhs10604.404-26F8	32.59	1.63	1.96	0.81
heart, embryo E16.CNhs11021.457-17C6	32.55	1.85	1.08	1.23
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	32.36	1.10	0.69	1.10
stomach, embryo E18.CNhs10999.1286-20C6	32.32	2.62	1.97	0.44
whole body, neonate N10.CNhs10518.761-6B4	32.00	0.93	0.93	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	31.97	0.92	0.92	0.31
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	31.77	1.28	2.89	0.32
testis, embryo E18.CNhs11027.503-18G5	31.76	1.86	2.20	0.84
cecum, adult.CNhs10467.37-13H4	31.69	1.86	1.86	0.00
gonad, embryo E13.CNhs11044.1564-45I6	31.65	1.39	1.00	0.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	31.64	2.01	1.78	0.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	31.55	2.82	1.27	0.85
whole body, neonate N06.CNhs10515.692-21D1	31.54	1.10	1.10	0.44
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	31.52	4.50	4.50	2.25
stomach, adult.CNhs10503.33-1H6	31.50	0.00	0.95	0.95
kidney, neonate N30.CNhs11203.1385-42H1	31.34	1.11	2.10	0.00
thymus, neonate N07.CNhs11211.713-19D3	31.32	1.52	1.91	2.06
whole body, embryo E16.CNhs10514.453-14F2	31.25	1.65	2.21	0.37
whole body, neonate N01.CNhs10576.659-23C6	31.18	0.96	1.34	0.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	31.15	0.30	1.51	0.30
amnion, adult pregnant day17.5.CNhs10488.583-22A8	31.15	0.00	0.74	0.74
spleen, neonate N25.CNhs11099.1354-25G3	31.11	1.60	1.37	0.00
whole body, embryo E14.CNhs10519.395-14B1	31.02	1.89	1.26	1.05
stomach, embryo E16.CNhs11022.459-17D4	31.00	1.94	1.08	0.32
kidney, embryo E17.CNhs11028.483-18I2	30.96	1.22	1.43	0.41
stomach, embryo E17.CNhs11006.1035-18D5	30.95	1.88	1.05	0.00
stomach, neonate N25.CNhs11104.1355-25E4	30.89	1.31	0.00	0.26
Ileum epithelium, pool1.CNhs13199.10252-104B9	30.78	0.76	0.57	0.19
lung, embryo E18.CNhs10583.1287-20I6	30.71	1.43	0.71	0.71
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	30.66	2.29	0.86	0.00
testis, embryo E13.CNhs11031.389-23F5	30.65	3.14	2.09	0.30
tongue, adult.CNhs10499.32-1B4	30.16	0.68	0.23	0.23
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	30.16	0.76	0.76	0.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	30.11	3.58	1.19	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	29.93	1.21	0.00	0.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	29.73	6.61	0.00	1.10
whole body, embryo E18.CNhs10516.493-3B3	29.71	1.87	1.17	0.70
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	29.70	0.90	2.70	0.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	29.67	1.44	2.27	0.41
intestine, embryo E12.CNhs11019.1251-16I5	29.65	2.13	2.35	0.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	29.58	1.01	3.02	1.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	29.49	1.03	1.03	0.34
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	29.40	1.26	0.70	0.28
pancreas, embryo E14.CNhs11012.405-44F4	29.38	0.97	0.73	1.21
thymus, adult.CNhs10471.38-12B5	29.07	2.21	1.58	1.26
mammary gland, adult lactating day02.CNhs10480.595-22B6	29.01	1.48	1.48	0.49
Ileum epithelium, pool2.CNhs13232.10253-104C1	28.98	0.25	0.00	0.76
pituitary gland, neonate N00.CNhs11190.1308-22E9	28.92	1.52	0.61	1.52
vagina, adult.CNhs10502.89-27D5	28.73	1.29	0.00	0.86
GP2+ M cell, pool1.CNhs13228.11845-124H9	28.71	0.00	0.00	0.00
whole body, embryo E13.CNhs10512.372-23H2	28.68	3.07	2.22	1.37
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	28.44	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	28.36	3.09	1.03	1.03
intestine, embryo E15.CNhs10602.976-16D8	28.22	1.80	1.42	0.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	28.20	1.51	0.34	1.01
stomach, embryo E12.CNhs10588.356-43E3	28.00	1.74	2.06	1.42
liver, neonate N30.CNhs11106.1382-42D1	27.98	1.93	0.96	0.00
thymus, embryo E17.CNhs10581.478-18C1	27.93	1.97	1.61	1.43
placenta, adult pregnant day17.CNhs10464.577-18G3	27.75	0.64	0.21	0.21
heart, embryo E13.CNhs11013.376-3I9	27.73	0.90	1.08	0.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	27.72	3.12	0.39	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	27.46	0.88	1.54	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	27.45	2.84	1.26	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	27.43	1.51	0.75	0.45
intestine, embryo E16.CNhs10585.463-22H4	27.43	1.01	1.01	1.41
adrenal gland, embryo E14.CNhs11038.406-44C5	27.41	1.73	1.56	0.52
eyeball, embryo E15.CNhs10593.426-16C9	27.37	3.06	1.62	1.08
heart, embryo E11.CNhs10586.331-24E9	27.13	1.24	0.62	1.45
thymus, embryo E18.CNhs10595.1273-19G4	27.02	2.19	2.38	0.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	26.83	0.69	1.37	0.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	26.82	0.56	0.70	0.42
eyeball, embryo E12.CNhs11016.345-16C6	26.80	1.82	1.04	1.30
forelimb, embryo E14.CNhs10577.413-26A8	26.74	1.75	0.88	0.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	26.58	2.10	0.00	0.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	26.57	1.56	0.00	1.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	26.56	1.48	0.49	0.33
heart, embryo E12.CNhs11015.353-12F5	26.50	2.35	0.70	0.23
thymus, embryo E15.CNhs11005.430-45I2	26.40	1.75	1.34	0.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	26.29	0.71	2.13	0.00
kidney, embryo E15.CNhs10997.434-16F8	26.28	1.94	1.03	1.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	26.17	0.00	0.00	1.05
Mouse Microglia, donor2.CNhs12634.11736-123E8	26.13	0.77	1.54	0.38
liver, neonate N00.CNhs11117.641-24F4	26.10	0.81	0.49	0.81
intestine, embryo E18.CNhs10526.1289-20F7	26.06	0.76	1.33	0.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	26.03	1.96	0.84	0.84
testis, embryo E17.CNhs11029.486-18I5	25.70	0.90	1.16	1.03
adrenal gland, embryo E17.CNhs11043.1263-45I1	25.37	0.46	1.38	0.69
spleen, embryo E18.CNhs11011.1271-21F2	25.37	1.30	1.67	0.56
placenta, adult pregnant day10.CNhs10472.539-13I7	25.11	0.94	0.23	0.23
whole body, embryo E11.CNhs11014.324-5I8	24.91	1.87	1.04	1.14
Mouse Microglia, donor1.CNhs12629.11718-123C8	24.87	1.80	1.20	0.60
liver, neonate N03.CNhs11123.1345-25G2	24.71	2.20	0.27	0.00
kidney, embryo E18.CNhs11001.1288-20C7	24.63	1.94	1.94	0.78
intestine, adult.CNhs10496.178-9A3	24.59	0.79	0.00	0.00
thymus, embryo E14.CNhs11041.402-44I4	24.12	0.81	1.42	0.81
intestine, neonate N01.CNhs11192.1322-23E9	24.05	0.99	1.32	0.49
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	23.96	1.75	0.88	2.05
intestine, embryo E17.CNhs10582.482-18D3	23.79	2.00	1.33	0.89
liver, embryo E18.CNhs10579.499-43G4	23.30	0.58	0.29	0.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	23.11	1.09	0.65	0.87
forelimb, embryo E11.CNhs10596.335-25E2	23.07	2.80	0.65	1.29
liver, neonate N07.CNhs11103.716-20H2	23.07	0.00	1.12	1.12
liver, embryo E13.CNhs10524.378-3H6	22.80	1.18	1.18	0.39
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	22.70	2.37	0.00	0.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	22.66	0.70	0.70	0.70
GP2+ M cell, pool3.CNhs13240.11847-124I2	22.62	0.43	0.43	0.22
liver, embryo E15.CNhs10520.433-16D7	22.52	1.22	1.22	0.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	22.44	1.36	1.19	2.21
liver, embryo E16.CNhs10523.462-17F5	22.19	1.21	1.45	0.24
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	21.87	2.32	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	21.60	0.80	0.48	0.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	21.56	1.44	1.44	0.00
lung, embryo E12.CNhs10522.354-16G2	21.41	2.08	0.19	0.00
testis, embryo E15.CNhs11034.443-27C5	21.34	1.32	1.32	0.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	21.32	2.00	0.33	0.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	21.32	1.68	2.24	0.56
liver, neonate N10.CNhs11115.751-24B9	21.22	0.94	1.87	0.62
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	21.06	0.90	1.79	0.45
thymus, embryo E16.CNhs11002.456-26C5	21.05	1.82	1.04	1.30
testis, neonate N30.CNhs11130.1391-42E2	21.03	0.29	8.06	1.15
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	20.98	0.28	0.99	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	20.83	0.00	1.64	0.00
kidney, embryo E14.CNhs10606.411-4I9	20.67	1.33	0.57	0.57
liver, embryo E12.CNhs10601.355-15F8	20.52	2.00	0.67	0.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	20.32	1.80	0.69	0.97
liver, embryo E14.CNhs10594.409-16E1	20.24	0.67	1.35	0.22
liver, neonate N25.CNhs11198.1368-26H1	19.91	0.54	1.44	0.18
testis, neonate N20.CNhs11110.839-18H3	19.81	1.21	8.94	1.69
liver, adult pregnant day01.CNhs10466.508-5B2	19.57	0.59	2.67	0.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	19.56	0.45	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	18.59	1.27	0.51	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	18.57	1.22	1.22	0.30
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	18.49	0.87	1.73	0.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	18.37	1.19	0.50	1.09
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	17.79	4.45	2.67	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	17.23	0.43	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	17.21	0.00	0.86	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	17.12	0.51	0.00	0.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	16.95	0.00	0.82	0.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	16.91	0.16	0.08	1.12
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	16.85	0.67	0.44	0.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	16.72	0.76	0.25	0.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	16.24	0.65	1.30	0.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	16.19	1.31	0.78	1.04
eyeball, embryo E14.CNhs10521.399-16E2	16.09	1.15	1.15	1.15
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	16.06	0.46	0.23	0.23
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	15.96	0.66	0.83	0.17
Mouse Schwann, donor1.CNhs12507.11728-123D9	15.75	1.74	0.23	0.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	14.02	1.92	1.08	1.32
kidney, embryo E16.CNhs10584.464-22A5	13.52	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	13.49	0.54	2.70	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	12.45	1.02	0.51	0.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	12.30	0.62	0.00	1.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	12.13	0.51	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	11.58	0.77	0.51	0.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	11.43	0.64	0.00	0.64
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	10.80	1.14	0.28	0.85
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	10.74	0.50	0.00	0.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	9.74	1.73	0.22	0.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	9.60	0.00	1.20	1.20
testis, adult.CNhs10504.57-7G5	9.02	0.56	18.04	0.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	7.72	0.00	1.40	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	7.33	0.22	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	6.64	0.72	0.00	0.18
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	4.08	0.00	2.72	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00

Showing 1 to 389 of 389 entries

0

20

40

60

80

100

120

p1@Smarcc2
p2@Smarcc2
p3@Smarcc2
p4@Smarcc2

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

---

No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

---

GeneID:	68094
LocusTag:	-
chromosome:	10
map location:	10 D3, 10, 10 D3;;10
type of gene:	protein-coding
Symbol from nomenclature authority:	Smarcc2
Full name from nomenclature authority:	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Nomenclature status:	O
Other designations:	BAF170, BRG1-associated factor 170, SWI/SNF complex 170 kDa subunit, SWI/SNF complex subunit SMARCC2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2, BAF170;;BRG1-associated factor 170;;SWI/SNF complex 170 kDa subunit;;SWI/SNF complex subunit SMARCC2;;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2
Modification date:	08.01.2012