EntrezGene:73341

Symbol:	Arhgef6
Description:	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
Synonyms:	1600028C08Rik, 1700038J06Rik, 4930592P22Rik, alpha-PIX
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:73341 MGI:1920591 Ensembl:ENSMUSG00000031133 Vega:OTTMUSG00000017820
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chrX:54534768..54534773,-	p10@Arhgef6
Mm9::chrX:54579325..54579383,-	p3@Arhgef6
Mm9::chrX:54579404..54579426,-	p7@Arhgef6
Mm9::chrX:54579450..54579489,-	p5@Arhgef6
Mm9::chrX:54579770..54579859,-	p11@Arhgef6
Mm9::chrX:54579863..54579889,-	p12@Arhgef6
Mm9::chrX:54579932..54579956,-	p13@Arhgef6
Mm9::chrX:54591676..54591689,-	p4@Arhgef6
Mm9::chrX:54591690..54591760,-	p1@Arhgef6
Mm9::chrX:54591775..54591787,-	p6@Arhgef6
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Arhgef6	p3@Arhgef6	p4@Arhgef6	p5@Arhgef6

Sample	p1@Arhgef6	p3@Arhgef6	p4@Arhgef6	p5@Arhgef6
placenta, adult pregnant day17.CNhs10464.577-18G3	365.41	0.21	4.24	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	289.96	0.49	2.22	0.25
placenta, adult pregnant day10.CNhs10472.539-13I7	247.58	0.00	4.69	0.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	150.99	0.00	18.93	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	150.25	0.00	13.81	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	148.90	0.00	12.29	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	147.11	0.00	25.13	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	138.23	0.00	17.65	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	89.59	2.85	10.10	1.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	87.51	0.00	7.81	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	72.59	0.00	8.22	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	70.90	0.09	10.49	0.00
thymus, neonate N30.CNhs11132.1393-42G2	62.88	0.47	19.99	0.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	61.84	0.00	6.39	0.00
thymus, neonate N20.CNhs11186.820-7A2	57.40	0.00	15.50	0.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	52.17	0.00	6.33	0.00
thymus, neonate N10.CNhs11194.748-24E4	50.82	0.30	15.43	0.10
thymus, neonate N25.CNhs11125.1362-25G7	49.93	0.19	13.08	0.10
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	49.32	0.00	7.25	0.00
thymus, adult.CNhs10471.38-12B5	48.35	0.32	13.59	0.00
thymus, neonate N06.CNhs11197.681-26C4	44.63	0.30	12.82	0.40
thymus, neonate N07.CNhs11211.713-19D3	44.58	0.53	15.09	0.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	43.33	0.27	3.02	0.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	41.64	0.00	1.01	0.00
thymus, neonate N03.CNhs11137.2104-43C7	40.91	0.15	9.75	0.00
thymus, neonate N02.CNhs11181.1541-43F8	38.82	0.36	12.26	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	36.75	0.32	2.52	0.16
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	33.71	0.26	5.40	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	33.25	0.00	6.54	0.28
thymus, embryo E18.CNhs10595.1273-19G4	32.19	0.60	7.75	0.00
bone (os femoris), adult.CNhs10483.56-12G2	31.85	2.65	6.19	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	29.28	0.00	2.12	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	28.83	3.81	2.72	2.72
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	27.52	0.00	1.34	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	26.68	0.00	2.11	0.70
lung, neonate N20.CNhs11109.822-18A4	26.38	2.46	1.97	2.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	24.81	0.00	2.81	0.00
lung, neonate N30.CNhs11133.1394-42H2	22.85	3.18	2.60	2.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	21.97	1.96	3.64	0.42
lung, adult.CNhs10474.28-22B1	20.51	3.33	1.48	2.22
thymus, embryo E17.CNhs10581.478-18C1	20.41	0.36	5.73	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	20.20	0.00	0.22	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	20.04	1.52	3.32	0.41
spleen, adult.CNhs10465.25-2G2	19.48	0.34	1.20	0.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	19.29	0.00	1.41	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	18.09	0.60	3.35	0.12
lung, neonate N25.CNhs11119.1359-25C7	17.96	3.28	3.28	3.28
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	17.92	0.25	3.43	0.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	16.83	1.53	3.23	0.51
spleen, neonate N25.CNhs11099.1354-25G3	16.70	0.23	0.92	0.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	16.59	15.08	3.02	0.00
lung, neonate N10.CNhs11219.750-23E6	16.42	2.23	1.44	2.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	15.85	0.00	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	15.85	0.26	5.59	0.13
bone (os femoris), neonate N20.CNhs11195.1350-25C3	15.52	3.88	0.97	3.39
lung, neonate N06.CNhs11212.683-20E5	14.82	1.10	1.89	2.52
liver, neonate N06.CNhs11101.684-20A8	14.38	2.88	0.00	1.44
bone (os femoris), neonate N16.CNhs11225.1525-43A6	14.35	7.95	0.22	1.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	14.18	3.98	2.11	0.62
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	13.80	0.00	1.20	0.60
spleen, neonate N20.CNhs11112.824-19H1	13.26	0.55	1.50	0.27
lung, neonate N07.CNhs11111.715-19A3	13.07	1.11	2.44	3.76
lung, neonate N00.CNhs11224.640-42C6	12.68	1.76	1.37	4.49
spleen, neonate N10.CNhs11116.752-24D1	12.43	0.00	2.07	0.57
lung, embryo E18.CNhs10583.1287-20I6	12.38	2.14	1.90	3.09
thymus, embryo E15.CNhs11005.430-45I2	12.12	0.41	4.31	0.10
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	11.99	0.00	0.68	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	10.93	0.20	1.21	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	10.89	3.44	1.43	3.15
spleen, embryo E18.CNhs11011.1271-21F2	10.74	0.00	0.74	0.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	10.45	0.00	0.80	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	9.95	0.56	0.94	0.00
liver, neonate N00.CNhs11117.641-24F4	9.89	0.81	0.97	1.95
oviduct, adult pregnant day01.CNhs10500.988-6G6	9.73	1.32	1.48	1.32
lung, embryo E17.CNhs10605.480-44A6	9.55	1.34	1.34	2.68
mammary gland, adult lactating day02.CNhs10480.595-22B6	9.34	0.98	0.49	0.00
ovary, adult.CNhs10507.91-2I7	8.80	1.85	0.99	1.42
heart, neonate N30.CNhs11202.1390-42D2	8.46	18.52	0.81	3.36
mammary gland, adult pregnant day19.CNhs10476.588-5H2	8.00	0.83	1.10	0.28
heart, neonate N20.CNhs11127.821-26I6	7.89	12.13	0.73	2.19
liver, embryo E18.CNhs10579.499-43G4	7.77	0.29	1.15	1.15
whole body, neonate N06.CNhs10515.692-21D1	7.72	4.41	1.10	1.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	7.46	1.80	0.26	1.03
cecum, adult.CNhs10467.37-13H4	7.46	1.86	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	7.43	0.21	1.86	0.41
whole body, neonate N10.CNhs10518.761-6B4	7.19	9.74	1.16	2.78
liver, neonate N10.CNhs11115.751-24B9	7.18	2.18	0.31	1.25
liver, embryo E17.CNhs10510.481-18A3	7.13	0.00	2.29	0.51
heart, neonate N25.CNhs11196.1351-25D3	7.03	13.17	0.66	3.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	6.96	0.58	0.58	1.74
intestinal mucosa, adult.CNhs10506.860-29I3	6.94	0.00	0.99	0.00
heart, neonate N16.CNhs11209.782-15G1	6.89	13.21	0.73	3.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	6.88	0.00	0.80	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	6.82	24.74	0.76	2.52
thymus, embryo E14.CNhs11041.402-44I4	6.69	0.00	2.03	0.20
aorta, adult.CNhs10498.46-23H1	6.65	3.76	0.43	1.45
liver, neonate N03.CNhs11123.1345-25G2	6.59	0.27	0.82	0.82
liver, neonate N07.CNhs11103.716-20H2	6.33	0.37	1.12	0.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	6.18	5.62	0.84	0.56
adrenal gland, adult.CNhs10508.49-24D7	6.09	2.97	0.45	3.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	6.02	0.00	0.86	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	5.96	0.10	0.50	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	5.96	0.00	0.92	0.00
uterus, adult.CNhs10509.92-27E5	5.86	0.37	1.28	0.18
heart, neonate N10.CNhs11118.749-24G1	5.75	11.49	0.99	3.12
colon, adult.CNhs10468.36-18H7	5.62	0.77	1.28	0.00
liver, embryo E16.CNhs10523.462-17F5	5.55	0.00	0.96	0.00
kidney, neonate N10.CNhs11206.758-6D5	5.44	0.19	1.01	0.57
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	5.36	1.19	0.68	0.60
kidney, neonate N25.CNhs11122.1353-25F3	5.34	0.78	0.31	0.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	5.16	2.58	1.55	1.03
whole body, neonate N00.CNhs10525.657-19C2	5.16	2.58	0.64	1.07
intestine, neonate N00.CNhs11126.644-26D1	4.75	0.47	0.95	0.00
intestine, neonate N20.CNhs11187.827-18D1	4.49	0.90	0.00	1.80
liver, embryo E15.CNhs10520.433-16D7	4.46	0.00	1.01	0.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	4.33	0.00	0.33	0.67
intestine, neonate N25.CNhs11121.1352-25E3	4.32	0.00	0.43	0.00
kidney, neonate N30.CNhs11203.1385-42H1	4.32	0.62	0.49	0.49
intestine, neonate N06.CNhs11102.688-20B8	4.27	0.25	0.00	0.50
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	4.26	1.24	0.18	2.13
ovary, neonate N00.CNhs11217.1299-22I4	4.24	0.81	0.98	1.14
Mouse Schwann, donor1.CNhs12507.11728-123D9	4.16	0.53	0.83	0.00
intestine, neonate N10.CNhs11098.755-23A5	4.09	0.19	0.78	0.78
kidney, neonate N20.CNhs11113.832-19I1	3.99	0.74	0.44	1.03
lung, embryo E16.CNhs10998.458-17B6	3.99	1.41	0.47	1.41
pancreas, adult.CNhs10486.34-16E4	3.98	1.33	0.00	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	3.88	1.03	0.23	0.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	3.85	1.28	1.28	2.57
pancreas, neonate N16.CNhs11136.787-43B6	3.79	0.32	0.00	1.26
heart, neonate N00.CNhs11213.639-21E3	3.74	13.08	0.47	6.89
submandibular gland, adult.CNhs10469.59-29C1	3.73	4.35	0.00	1.24
bone (os femoris), neonate N02.CNhs11227.1985-43F5	3.72	6.96	0.00	2.91
tongue, adult.CNhs10499.32-1B4	3.63	7.03	0.00	1.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	3.53	1.26	0.63	0.50
urinary bladder, adult.CNhs10481.879-12E4	3.48	2.32	0.39	1.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	3.41	6.99	0.51	3.24
intestine, neonate N30.CNhs11131.1384-42G1	3.39	0.20	0.80	0.40
stomach, neonate N07.CNhs11210.718-18A9	3.39	0.91	0.74	1.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	3.37	0.56	0.00	1.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	3.36	0.41	0.31	0.81
vagina, adult.CNhs10502.89-27D5	3.22	0.21	0.21	0.00
small intestine, neonate N16.CNhs11114.790-21I1	3.21	0.29	0.29	0.00
testis, neonate N30.CNhs11130.1391-42E2	3.17	2.30	0.29	0.58
pancreas, neonate N25.CNhs11094.1555-45E2	3.16	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	3.13	0.00	0.26	0.26
skin, neonate N03.CNhs11215.662-22H3	3.02	1.27	0.12	1.03
pancreas, neonate N01.CNhs11138.1531-43D7	2.91	0.36	1.09	0.73
liver, neonate N30.CNhs11106.1382-42D1	2.89	0.00	0.48	0.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	2.86	1.67	0.24	0.72
stomach, neonate N30.CNhs11134.1386-42I1	2.85	0.52	0.52	0.26
epididymis, adult.CNhs10490.58-23B2	2.78	0.25	0.25	0.25
liver, neonate N20.CNhs11220.823-25A3	2.78	0.00	0.25	0.51
adrenal gland, embryo E17.CNhs11043.1263-45I1	2.77	3.23	0.00	0.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	2.73	2.26	0.38	1.51
eyeball, neonate N16.CNhs11188.777-19A2	2.59	2.85	0.26	0.00
intestine, neonate N07.CNhs11095.720-20F2	2.59	0.20	0.20	0.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	2.57	1.93	0.64	0.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	2.53	1.01	0.00	0.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	2.53	2.28	0.25	1.52
adrenal gland, embryo E16.CNhs11004.1254-43D6	2.44	0.61	0.00	0.91
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	2.44	1.90	0.14	1.63
skin, neonate N00.CNhs11124.650-25G4	2.42	2.42	0.32	0.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	2.37	1.27	0.08	1.18
stomach, neonate N25.CNhs11104.1355-25E4	2.36	2.88	0.00	0.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	2.36	2.06	0.44	1.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	2.34	4.94	0.00	2.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	2.33	1.42	0.30	0.41
pancreas, neonate N00.CNhs11105.645-26G9	2.33	0.26	0.52	0.52
ovary, embryo E18.CNhs11040.505-44H7	2.31	0.36	0.53	0.71
adrenal gland, neonate N25.CNhs11223.1377-27I3	2.26	2.39	0.00	1.01
liver, embryo E14.CNhs10594.409-16E1	2.25	0.00	0.67	0.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	2.20	1.28	0.55	0.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	2.18	1.89	0.15	1.45
liver, embryo E13.CNhs10524.378-3H6	2.16	0.00	0.20	0.00
liver, neonate N25.CNhs11198.1368-26H1	2.15	0.54	0.36	0.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	2.12	4.59	0.00	2.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	2.10	1.32	0.26	1.84
whole body, neonate N01.CNhs10576.659-23C6	2.10	5.36	0.77	1.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	2.07	1.28	0.20	1.97
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	2.06	1.59	0.19	1.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	2.02	1.21	0.40	0.40
whole body, embryo E17.CNhs10517.475-3I5	2.00	1.50	0.00	0.75
stomach, embryo E18.CNhs10999.1286-20C6	1.97	0.22	0.22	0.87
forelimb, embryo E15.CNhs11007.437-20E7	1.95	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	1.95	1.17	0.00	0.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	1.92	1.79	0.26	1.86
stomach, neonate N03.CNhs11193.1340-24B8	1.89	0.94	0.27	1.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	1.89	0.38	0.19	1.89
whole body, embryo E18.CNhs10516.493-3B3	1.87	1.64	0.00	2.11
corpus striatum, adult.CNhs10487.19-21D8	1.83	0.46	0.46	1.37
intestine, neonate N01.CNhs11192.1322-23E9	1.81	0.33	0.33	0.16
skin, adult.CNhs10492.30-1C3	1.81	3.46	0.16	0.66
cortex, neonate N30.CNhs11107.1392-42F2	1.79	1.02	0.00	0.26
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	1.79	0.00	0.00	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	1.78	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	1.78	1.56	0.44	2.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	1.75	1.75	0.29	0.29
heart, embryo E16.CNhs11021.457-17C6	1.70	8.64	0.46	4.78
lung, embryo E15.CNhs11020.432-17C5	1.70	0.34	0.51	1.02
pituitary gland, adult.CNhs10493.21-1G8	1.70	1.70	1.02	0.68
testis, neonate N07.CNhs11222.726-26I4	1.69	0.26	0.13	0.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	1.67	2.01	0.34	1.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	1.66	1.66	0.24	2.14
adrenal gland, neonate N00.CNhs11191.1311-23C1	1.65	5.17	0.24	1.76
corpora quadrigemina, adult.CNhs10501.16-22A4	1.65	2.40	0.00	1.20
pituitary gland, embryo E17.CNhs11039.1265-44F5	1.65	0.33	0.00	0.99
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	1.65	0.82	0.00	1.65
heart, embryo E17.CNhs11025.479-18E5	1.63	10.46	0.00	5.35
lung, embryo E14.CNhs10604.404-26F8	1.63	0.49	0.16	0.98
heart, embryo E18.CNhs11030.1283-20G3	1.61	9.66	0.00	4.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	1.58	2.37	0.00	1.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	1.56	2.01	0.00	1.34
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	1.55	0.62	0.46	1.39
kidney, neonate N00.CNhs11214.646-21G7	1.54	0.14	0.28	0.49
prostate, adult.CNhs10470.859-1F8	1.54	0.22	0.22	0.22
whole body, embryo E13.CNhs10512.372-23H2	1.54	0.17	0.68	0.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	1.54	2.12	0.00	1.93
vesicular gland, adult.CNhs10491.51-27F8	1.50	0.50	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	1.48	5.19	0.19	1.48
forelimb, embryo E18.CNhs11008.1520-43B5	1.44	1.03	0.21	1.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	1.43	1.91	0.48	0.72
skin, neonate N06.CNhs11097.693-20I5	1.43	0.95	0.24	0.60
heart, embryo E14.CNhs10597.403-26D4	1.42	4.02	0.47	4.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	1.40	0.00	0.00	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	1.39	1.39	0.00	0.35
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	1.39	1.85	0.23	1.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	1.37	0.69	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	1.36	0.10	0.10	0.52
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	1.35	0.68	0.00	0.68
whole body, embryo E17.5.CNhs10513.490-9F9	1.35	0.96	0.77	1.54
intestine, embryo E17.CNhs10582.482-18D3	1.33	0.22	0.22	0.00
intestine, embryo E18.CNhs10526.1289-20F7	1.33	0.19	0.19	0.38
forelimb, embryo E12.CNhs10600.359-14H2	1.32	0.00	0.00	0.19
forelimb, embryo E14.CNhs10577.413-26A8	1.32	0.44	0.00	0.44
intestine, adult.CNhs10496.178-9A3	1.32	0.26	0.53	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	1.29	1.08	0.22	0.22
whole body, embryo E16.CNhs10514.453-14F2	1.29	0.37	0.00	1.10
Ileum epithelium, pool2.CNhs13232.10253-104C1	1.26	0.00	0.00	0.00
stomach, embryo E17.CNhs11006.1035-18D5	1.25	0.21	0.00	0.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	1.23	0.82	0.41	2.86
pituitary gland, neonate N00.CNhs11190.1308-22E9	1.22	0.30	0.00	0.30
whole body, embryo E14.5.CNhs10578.420-27D2	1.22	0.00	0.00	0.73
kidney, embryo E18.CNhs11001.1288-20C7	1.16	0.00	0.00	0.19
skin, neonate N10.CNhs11108.762-6C4	1.15	0.49	0.66	0.49
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	1.13	0.56	0.56	0.56
medulla oblongata, adult.CNhs10477.17-12C2	1.12	4.98	0.00	0.96
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	1.10	2.20	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	1.06	0.59	0.47	1.29
hippocampus, adult.CNhs10478.13-16E8	1.05	3.79	0.42	2.31
whole body, embryo E14.CNhs10519.395-14B1	1.05	0.21	0.21	0.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	1.04	0.52	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	1.03	0.00	1.03	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	1.03	1.37	0.34	2.06
kidney, embryo E17.CNhs11028.483-18I2	1.02	0.20	0.20	0.81
pancreas, embryo E14.CNhs11012.405-44F4	0.97	0.00	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.97	0.72	0.00	0.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	0.95	2.38	0.48	3.81
medulla oblongata, neonate N30.CNhs11200.1396-42A3	0.94	3.99	0.00	1.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	0.92	0.00	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.92	0.61	0.00	0.00
testis, embryo E17.CNhs11029.486-18I5	0.90	0.13	0.13	1.42
pancreas, embryo E17.CNhs10599.1558-45G3	0.89	0.00	0.00	0.30
cortex, adult.CNhs10473.12-14D5	0.87	3.13	0.17	1.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.85	1.98	0.28	0.85
eyeball, adult.CNhs10484.31-12G4	0.84	1.26	0.00	0.63
heart, neonate N03.CNhs11221.1349-25I2	0.82	8.23	0.16	5.76
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	0.82	0.62	0.41	1.85
intestine, embryo E16.CNhs10585.463-22H4	0.81	0.40	0.00	0.00
stomach, embryo E15.CNhs10603.1252-16G8	0.81	0.00	0.20	0.41
whole body, embryo E12.CNhs10587.857-27C9	0.80	0.40	0.00	0.00
heart, embryo E15.CNhs11017.431-16C8	0.79	5.31	0.39	6.30
stomach, embryo E12.CNhs10588.356-43E3	0.79	0.00	0.00	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	0.77	0.00	0.00	0.00
intestine, embryo E15.CNhs10602.976-16D8	0.77	0.00	0.26	0.13
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.76	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	0.76	2.14	0.31	2.44
lung, embryo E12.CNhs10522.354-16G2	0.76	0.38	0.00	0.57
stomach, embryo E16.CNhs11022.459-17D4	0.76	0.22	0.11	0.43
eyeball, neonate N02.CNhs11205.1551-44G8	0.75	0.66	0.09	0.19
heart, embryo E13.CNhs11013.376-3I9	0.72	3.60	0.00	3.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	0.71	0.00	0.71	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	0.71	1.07	0.00	0.71
pituitary gland, embryo E15.CNhs10592.427-16B9	0.71	0.53	0.00	0.18
pituitary gland, embryo E16.CNhs11036.449-43F6	0.71	0.36	0.00	0.89
adrenal gland, embryo E14.CNhs11038.406-44C5	0.69	1.04	0.00	0.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	0.69	0.17	0.00	0.69
eyeball, neonate N00.CNhs11207.633-15C6	0.68	0.07	0.07	0.61
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.67	0.22	0.22	0.00
testis, embryo E15.CNhs11034.443-27C5	0.66	0.50	0.00	0.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.65	0.00	0.00	0.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.64	0.00	0.00	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	0.64	2.94	0.00	0.77
olfactory brain, adult.CNhs10489.18-22I9	0.64	3.86	0.32	2.57
cerebellum, neonate N30.CNhs11135.1395-42I2	0.63	1.68	0.00	0.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.63	1.58	0.00	0.63
diencephalon, adult.CNhs10482.20-12F2	0.62	1.87	0.00	0.83
gonad, embryo E13.CNhs11044.1564-45I6	0.60	0.00	0.20	0.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	0.59	0.59	0.00	0.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	0.57	0.57	0.00	0.43
kidney, embryo E15.CNhs10997.434-16F8	0.57	0.23	0.00	0.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	0.56	0.56	0.56	0.56
forelimb, embryo E13.CNhs10589.384-1E2	0.53	0.00	0.00	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	0.52	0.00	0.00	1.04
eyeball, neonate N01.CNhs11140.1532-43E7	0.51	0.77	0.00	1.28
hippocampus, neonate N00.CNhs11228.627-43G1	0.51	0.10	0.00	0.41
testis, embryo E18.CNhs11027.503-18G5	0.51	1.35	0.17	1.18
liver, embryo E12.CNhs10601.355-15F8	0.50	0.00	0.50	0.50
heart, embryo E12.CNhs11015.353-12F5	0.47	2.11	0.00	3.05
eyeball, embryo E14.CNhs10521.399-16E2	0.46	0.23	0.23	0.23
intestine, embryo E13.CNhs11010.381-16D5	0.46	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	0.45	0.45	0.45	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.45	0.00	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	0.45	3.32	0.30	2.56
eyeball, embryo E17.CNhs11023.1261-18D4	0.45	0.30	0.00	0.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	0.45	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	0.45	0.91	0.45	0.91
intestine, embryo E12.CNhs11019.1251-16I5	0.43	0.21	0.21	0.85
corpus striatum, neonate N00.CNhs11226.630-43F1	0.38	0.88	0.00	0.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.37	0.37	0.00	0.18
eyeball, embryo E15.CNhs10593.426-16C9	0.36	0.00	0.00	0.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	0.31	3.84	0.00	1.38
testis, embryo E13.CNhs11031.389-23F5	0.30	0.60	0.15	0.15
cerebellum, adult.CNhs10494.15-8B2	0.29	0.88	0.00	0.29
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	0.28	0.84	0.00	0.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	0.28	5.58	0.00	1.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	0.27	0.00	0.00	0.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	0.27	0.73	0.00	0.18
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.22	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	0.22	0.44	0.00	0.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.22	0.22	0.00	0.43
forelimb, embryo E11.CNhs10596.335-25E2	0.22	0.00	0.00	0.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	0.21	0.00	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	0.21	1.86	0.21	3.94
pituitary gland, embryo E14.CNhs11037.398-44A5	0.21	0.21	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	0.21	0.00	0.00	0.21
Mouse Granule cells, donor1.CNhs12131.11713-123C3	0.20	0.40	0.00	0.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	0.19	0.67	0.00	0.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	0.19	0.00	0.19	0.56
pancreas, embryo E16.CNhs11003.460-26E5	0.19	0.00	0.19	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	0.18	0.00	0.00	0.72
diencephalon, neonate N30.CNhs11201.1388-42B2	0.16	1.46	0.00	1.30
Mouse Schwann, donor2.CNhs12573.11746-123F9	0.15	0.91	0.00	0.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	0.14	0.99	0.00	2.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	0.12	0.61	0.00	0.86
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	0.10	0.00	0.10	0.21
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.20	0.00	0.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	0.00	0.65	0.00	0.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	0.00	0.44	0.00	0.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	0.00	0.39	0.00	0.19
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	0.00	0.00	0.00	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	0.00	0.53	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.00	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	0.00	0.00	0.00	0.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	0.00	1.14	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	0.00	0.13	0.00	1.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.54	0.54
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	0.00	0.00	0.00	7.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00
eyeball, embryo E12.CNhs11016.345-16C6	0.00	0.00	0.00	0.39
kidney, embryo E14.CNhs10606.411-4I9	0.00	0.00	0.00	0.00
kidney, embryo E16.CNhs10584.464-22A5	0.00	0.00	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.00	0.00	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.00	0.30	0.30	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	0.00	0.13	0.00	0.39
stomach, adult.CNhs10503.33-1H6	0.00	3.82	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.00	0.00
testis, embryo E16.CNhs11033.470-26G5	0.00	0.58	0.00	1.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	0.00	0.00	0.92	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	0.00	1.72	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	0.00	0.00	0.00	0.76

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p1@Arhgef6
p3@Arhgef6
p4@Arhgef6
p5@Arhgef6

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	73341
LocusTag:	RP23-372E6.1
chromosome:	X
map location:	X A5, X, X A5;;X
type of gene:	protein-coding
Symbol from nomenclature authority:	Arhgef6
Full name from nomenclature authority:	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
Nomenclature status:	O
Other designations:	Rac/Cdc42 guanine exchange factor (GEF) 6, alpha PIX Rho GTPase guanine nucleotide exchange factor, rac/Cdc42 guanine nucleotide exchange factor 6, rho guanine nucleotide exchange factor 6, Rac/Cdc42 guanine exchange factor (GEF) 6;;alpha PIX Rho GTPase guanine nucleotide exchange factor;;rac/Cdc42 guanine nucleotide exchange factor 6;;rho guanine nucleotide exchange factor 6
Modification date:	15.01.2012