FFCP PHASE1:Hg19::chr11:27721994..27722008,-
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| Short description: | p1@BDNF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_BDNF_5end |
| Coexpression cluster: | C1629_hepatic_spindle_Fibroblast_Smooth_liposarcoma_papillary_Ciliary |
| Association with transcript: | 26bp_to_ENST00000356660, ENST00000418212, ENST00000533246, NM_001143813, NM_001143814, NM_001709, uc001mru.2, uc009yjd.2, uc010rdw.1_5end |
| EntrezGene: | BDNF |
| HGNC: | 1033 |
| UniProt: | P23560 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@BDNF |
|---|
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25
50
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125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 7.72e-22 | 76 |
| smooth muscle cell | 1.10e-20 | 43 |
| smooth muscle myoblast | 1.10e-20 | 43 |
| muscle cell | 1.49e-19 | 55 |
| muscle precursor cell | 3.59e-19 | 58 |
| myoblast | 3.59e-19 | 58 |
| multi-potent skeletal muscle stem cell | 3.59e-19 | 58 |
| electrically responsive cell | 2.19e-18 | 61 |
| electrically active cell | 2.19e-18 | 61 |
| vascular associated smooth muscle cell | 8.20e-18 | 32 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| somite | 1.73e-18 | 71 |
| presomitic mesoderm | 1.73e-18 | 71 |
| presumptive segmental plate | 1.73e-18 | 71 |
| dermomyotome | 1.73e-18 | 71 |
| trunk paraxial mesoderm | 1.73e-18 | 71 |
| dense mesenchyme tissue | 2.13e-18 | 73 |
| skeletal muscle tissue | 3.96e-18 | 62 |
| striated muscle tissue | 3.96e-18 | 62 |
| myotome | 3.96e-18 | 62 |
| paraxial mesoderm | 6.68e-18 | 72 |
Showing 1 to 10 of 39 entries
