FFCP PHASE1:Hg19::chr12:48164855..48164868,-
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Short description: | p21@RAPGEF3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RAPGEF3_5end |
Coexpression cluster: | C2207_rhabdomyosarcoma_Corneal_bronchogenic_kidney_cervical_neuroepithelioma_neuroectodermal |
Association with transcript: | -32bp_to_ENST00000397089, ENST00000548919, uc009zks.2_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | F8VRX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p21@RAPGEF3 |
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0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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corneal epithelial cell | 6.48e-18 | 2 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
neural tissue | 9.07e-18 | 2 |
cornea | 1.22e-09 | 4 |
eye surface | 1.22e-09 | 4 |
optic eminence | 1.22e-09 | 4 |
corneal primordium | 1.22e-09 | 4 |
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 9.07e-18 | 2 |
neurofibroma | 9.07e-18 | 2 |
neuroectodermal tumor | 3.97e-14 | 10 |
peripheral nervous system neoplasm | 2.59e-12 | 3 |
cervical cancer | 5.35e-08 | 5 |
sarcoma | 1.33e-07 | 20 |
germ cell and embryonal cancer | 5.91e-07 | 22 |
germ cell cancer | 5.91e-07 | 22 |
neuroendocrine tumor | 8.48e-07 | 6 |
Showing 1 to 9 of 9 entries