FFCP PHASE1:Hg19::chr12:66218923..66218934,+
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| Short description: | p14@HMGA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_HMGA2_5end |
| Coexpression cluster: | C1682_schwannoma_Fibroblast_hepatoblastoma_Wilms_adrenal_Aortic_meningioma |
| Association with transcript: | 20bp_to_ENST00000393577_5end |
| EntrezGene: | HMGA2 |
| HGNC: | 5009 |
| UniProt: | F5H2A4 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p14@HMGA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 5.80e-30 | 58 |
| myoblast | 5.80e-30 | 58 |
| multi-potent skeletal muscle stem cell | 5.80e-30 | 58 |
| smooth muscle cell | 1.70e-29 | 43 |
| smooth muscle myoblast | 1.70e-29 | 43 |
| vascular associated smooth muscle cell | 8.68e-29 | 32 |
| muscle cell | 6.66e-27 | 55 |
| electrically responsive cell | 9.92e-23 | 61 |
| electrically active cell | 9.92e-23 | 61 |
| mesodermal cell | 7.86e-15 | 121 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| multilaminar epithelium | 2.78e-28 | 83 |
| somite | 3.20e-27 | 71 |
| presomitic mesoderm | 3.20e-27 | 71 |
| presumptive segmental plate | 3.20e-27 | 71 |
| dermomyotome | 3.20e-27 | 71 |
| trunk paraxial mesoderm | 3.20e-27 | 71 |
| dense mesenchyme tissue | 5.07e-27 | 73 |
| skeletal muscle tissue | 6.22e-27 | 62 |
| striated muscle tissue | 6.22e-27 | 62 |
| myotome | 6.22e-27 | 62 |
Showing 1 to 10 of 51 entries
