FFCP PHASE1:Hg19::chr15:33010194..33010211,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@GREM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GREM1_5end |
| Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
| Association with transcript: | 0bp_to_ENST00000560677, ENST00000560830, NM_001191322, NM_001191323, NM_013372, uc001zhd.1, uc001zhe.1, uc010uby.1_5end |
| EntrezGene: | GREM1 |
| HGNC: | 2001 |
| UniProt: | B3KTR9O60565A6XAA7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GREM1 |
|---|
0
2000
4000
6000
8000
10000
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 2.72e-26 | 76 |
| muscle precursor cell | 3.43e-20 | 58 |
| myoblast | 3.43e-20 | 58 |
| multi-potent skeletal muscle stem cell | 3.43e-20 | 58 |
| muscle cell | 1.26e-18 | 55 |
| smooth muscle cell | 1.74e-17 | 43 |
| smooth muscle myoblast | 1.74e-17 | 43 |
| electrically responsive cell | 2.07e-17 | 61 |
| electrically active cell | 2.07e-17 | 61 |
| vascular associated smooth muscle cell | 1.26e-13 | 32 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| dense mesenchyme tissue | 2.58e-24 | 73 |
| paraxial mesoderm | 9.84e-24 | 72 |
| presumptive paraxial mesoderm | 9.84e-24 | 72 |
| somite | 1.31e-23 | 71 |
| presomitic mesoderm | 1.31e-23 | 71 |
| presumptive segmental plate | 1.31e-23 | 71 |
| dermomyotome | 1.31e-23 | 71 |
| trunk paraxial mesoderm | 1.31e-23 | 71 |
| epithelial vesicle | 1.79e-23 | 78 |
| multilaminar epithelium | 9.01e-20 | 83 |
Showing 1 to 10 of 35 entries
