FFCP PHASE2:Hg19::chr12:54410664..54410684,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@HOXC4, p1@HOXC5, p1@HOXC6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HOXC4_5end, CAGE_peak_1_at_HOXC5_5end, CAGE_peak_1_at_HOXC6_5end |
| Coexpression cluster: | C1362_Preadipocyte_Adipocyte_Fibroblast_Mesenchymal_mesenchymal_Myoblast_Smooth |
| Association with transcript: | 22bp_to_NM_014620, NM_153693, NR_003084, uc001ses.2, uc001set.2, uc001seu.2_5end |
| EntrezGene: | 3221,3223,3222 |
| HGNC: | 5128, 5127&submit=Submit 5126, 5128, 5127 |
| UniProt: | P09017Q86TF7P09630 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HOXC4p1@HOXC5p1@HOXC6 |
|---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| skin fibroblast | 1.11e-11 | 23 |
| fat cell | 4.32e-10 | 15 |
| preadipocyte | 3.98e-08 | 12 |
| fibroblast | 6.78e-08 | 76 |
| mesenchymal stem cell of adipose | 5.97e-07 | 8 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| integument | 6.35e-13 | 46 |
| integumental system | 6.35e-13 | 46 |
| adipose tissue | 7.83e-11 | 14 |
| skin of body | 1.96e-10 | 41 |
| kidney | 6.01e-07 | 26 |
| kidney mesenchyme | 6.01e-07 | 26 |
| upper urinary tract | 6.01e-07 | 26 |
| kidney rudiment | 6.01e-07 | 26 |
| kidney field | 6.01e-07 | 26 |
| articulation | 8.41e-07 | 8 |
Showing 1 to 10 of 14 entries
