Personal tools

MacroAPE 1083:16-GTKACGDWGC

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 16-GTKACGDWGC,CNhs12001,BestGuess:E4F1_f1_HM09(0.725021247236754),T:381.0(7.83%),B:1593.4(3.75%),P:1e-38

Motif matrix
POACGT
10.38116.764267.46296.393
297.15593.3450.381190.119
368.588.001124.968179.07
4356.23524.0030.3810.381
50.381330.32749.9110.381
69.14491.059169.164111.633
7138.6840.381104.775136.779
8132.20757.1570.104121.539
90.3810.381246.888133.35
1071.628184.023124.9680.381

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

FOXF2#MA0030.140.001734810.825771110GTTACGAAGCATTGTTTACGTTTG-
FOXC1#MA0032.1-20.004567812.1742818GTTACGAAGCTACTTACC-
ESR1#MA0112.280.004866022.31622110GTTACGAAGCAGGTCAGGGTGACCTGGGCC-
Foxa2#MA0047.220.006177242.94037110GTTACGAAGCTGTTTACTTAGG+
ARO80#MA0273.1110.008253463.92865110GTTACGAAGCGATAATTCTCGGCAAGTATGT+
ovo#MA0126.130.01950729.2854316GTTACGAAGCACTGTTACT-
prd#MA0239.130.01950729.2854316GTTACGAAGCACTGTTACT-
ESR1#MA0112.290.02039539.7081419GTTACGAAGCGGGGTCACGGTGACCTGG-
NFE2L2#MA0150.100.0205619.78705110GTTACGAAGCATGACTCAGCA+
CRZ1#MA0285.100.02091639.9561719GTTACGAAGCGTGGCTTAG-
bZIP911#MA0097.110.02098649.98953110GTTACGAAGCGATGACGTGGCC+