MacroAPE 1083:5-GGTGRTTDTT

Full Name: 5-GGTGRTTDTT,CNhs13795,BestGuess:HBP1_HMGB_SSRP1_UBTF.p2.SwissRegulon.nucfreq(0.710333748376522),T:1718.0(38.68%),B:12982.1(29.64%),P:1e-37

Motif matrix
PO A C G T 1 1.718 616.762 951.772 147.748 2 350.472 243.956 1015.338 108.234 3 414.038 1.718 429.5 872.744 4 1.718 1.718 1168.24 546.324 5 670.02 175.236 486.194 388.268 6 331.574 1.718 5.154 1379.554 7 1.718 1.718 27.488 1687.076 8 625.352 1.718 534.298 556.632 9 276.598 104.798 352.19 984.414 10 1.718 1.718 1.718 1712.846

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
FOXI1#MA0042.1	1	0.000944929	0.449786	0.899572	10	GGTGATTATT	GGATGTTTGTTT	+
Pax4#MA0068.1	19	0.00194471	0.925683	0.9072	10	GGTGATTATT	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-
GSM1#MA0308.1	8	0.00285882	1.3608	0.9072	10	GGTGATTATT	TATACTCCGGAGTTTTTTAAT	-
EDS1#MA0294.1	-4	0.00481169	2.29036	1	6	GGTGATTATT	ATTTTTCCG	-
TBP#MA0108.2	1	0.00965516	4.59586	1	10	GGTGATTATT	CCCCGCCTTTTATAC	-
dl_1#MA0022.1	-1	0.0100501	4.78383	1	9	GGTGATTATT	GGGGTTTTTCCC	+
RGT1#MA0367.1	-3	0.0102472	4.87768	1	7	GGTGATTATT	AATTTTTCCGG	+
TBP#MA0108.2	1	0.0102515	4.87972	1	10	GGTGATTATT	CCCCGCCTTTTATAC	-
Gfi#MA0038.1	1	0.0107712	5.12708	1	9	GGTGATTATT	CAGTGATTTG	-
SUM1#MA0398.1	-1	0.011771	5.60301	1	9	GGTGATTATT	AAAATTTTT	+
HNF1A#MA0046.1	0	0.0166399	7.9206	1	10	GGTGATTATT	GGTAATTATTAACC	-
Foxd3#MA0041.1	0	0.0167406	7.96852	1	10	GGTGATTATT	GAATGTTTGTTT	+
CG4328#MA0182.1	-4	0.0201642	9.59814	1	6	GGTGATTATT	TTTATTA	+